Literature DB >> 26396889

Crystal structure of 2-meth-oxy-2-[(4-meth-oxy-phen-yl)sulfan-yl]-1-phenyl-ethanone.

Ignez Caracelli1, Paulo R Olivato2, Henrique J Traesel2, Jéssica Valença2, Daniel N S Rodrigues2, Edward R T Tiekink3.   

Abstract

In the title β-thio-carbonyl compound, C16H16O3S, the adjacent meth-oxy and carbonyl O atoms are synperiplanar [the O-C-C-O torsion angle is 19.8 (4)°] and are separated by 2.582 (3) Å. The dihedral angle between the rings is 40.11 (16)°, and the meth-oxy group is coplanar with the benzene ring to which it is connected [the C-C-O-C torsion angle is 179.1 (3)°]. The most notable feature of the crystal packing is the formation of methine and methyl C-H⋯O(carbon-yl) inter-actions that lead to a supra-molecular chain with a zigzag topology along the c axis. Chains pack with no specific inter-molecular inter-actions between them.

Entities:  

Keywords:  C—H⋯O inter­actions; conformation; crystal structure; β-thio­carbon­yl

Year:  2015        PMID: 26396889      PMCID: PMC4555440          DOI: 10.1107/S2056989015014565

Source DB:  PubMed          Journal:  Acta Crystallogr E Crystallogr Commun


Related literature

For background to the present structural study, see: Vinhato et al. (2013 ▸); Zukerman-Schpector et al. (2008 ▸, 2015 ▸); Olivato et al. (2013 ▸); Distefano et al. (1996 ▸). For the structure of the methyl derivative, see: Zukerman-Schpector et al. (2015 ▸). For synthetic procedures, see: Ali & McDermott (2002 ▸); Zoretic & Soja (1976 ▸).

Experimental

Crystal data

C16H16O3S M = 288.35 Orthorhombic, a = 18.769 (3) Å b = 7.643 (1) Å c = 10.0578 (16) Å V = 1442.8 (4) Å3 Z = 4 Mo Kα radiation μ = 0.23 mm−1 T = 296 K 0.37 × 0.16 × 0.09 mm

Data collection

Bruker APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▸) T min = 0.618, T max = 0.745 6725 measured reflections 1935 independent reflections 1627 reflections with I > 2σ(I) R int = 0.026

Refinement

R[F 2 > 2σ(F 2)] = 0.031 wR(F 2) = 0.076 S = 1.04 1935 reflections 183 parameters 1 restraint H-atom parameters constrained Δρmax = 0.12 e Å−3 Δρmin = −0.14 e Å−3 Absolute structure: Flack x determined using 418 quotients [(I +)−(I −)]/[(I +)+(I −)] (Parsons et al., 2013 ▸) Absolute structure parameter: 0.09 (4)

Data collection: APEX2 (Bruker, 2009 ▸); cell refinement: SAINT (Bruker, 2009 ▸); data reduction: SAINT (Bruker, 2009 ▸); program(s) used to solve structure: SIR (Burla et al., 2015 ▸); program(s) used to refine structure: SHELXL2014 (Sheldrick, 2015 ▸); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012 ▸) and DIAMOND (Brandenburg, 2006 ▸); software used to prepare material for publication: Marvinsketch (ChemAxon, 2010 ▸) and publCIF (Westrip, 2010 ▸). Crystal structure: contains datablock(s) I, New_Global_Publ_Block. DOI: 10.1107/S2056989015014565/hg5455sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S2056989015014565/hg5455Isup2.hkl Click here for additional data file. Supporting information file. DOI: 10.1107/S2056989015014565/hg5455Isup3.cml Click here for additional data file. . DOI: 10.1107/S2056989015014565/hg5455fig1.tif The mol­ecular structure of the title compound showing the atom-labelling scheme and displacement ellipsoids at the 35% probability level. Click here for additional data file. . DOI: 10.1107/S2056989015014565/hg5455fig2.tif The supra­molecular chain in the title compound sustained by C—H⋯O inter­actions shown as orange dashed lines. Hydrogen atoms not participating in C—H⋯O inter­actions have been omitted for reasons of clarity. Click here for additional data file. c . DOI: 10.1107/S2056989015014565/hg5455fig3.tif Unit-cell contents of the title compound shown in projection down the c axis. Inter­molecular C—H⋯O inter­actions are shown as orange dashed lines. One supra­molecular chain has been highlighted in space-filling mode. CCDC reference: 1416521 Additional supporting information: crystallographic information; 3D view; checkCIF report
C16H16O3SDx = 1.327 Mg m3
Mr = 288.35Mo Kα radiation, λ = 0.71073 Å
Orthorhombic, Pca21Cell parameters from 2745 reflections
a = 18.769 (3) Åθ = 2.2–25.1°
b = 7.643 (1) ŵ = 0.23 mm1
c = 10.0578 (16) ÅT = 296 K
V = 1442.8 (4) Å3Irregular, colourless
Z = 40.37 × 0.16 × 0.09 mm
F(000) = 608
Bruker APEXII CCD diffractometer1627 reflections with I > 2σ(I)
φ and ω scansRint = 0.026
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)θmax = 25.4°, θmin = 2.2°
Tmin = 0.618, Tmax = 0.745h = −22→22
6725 measured reflectionsk = −8→9
1935 independent reflectionsl = −7→12
Refinement on F2Hydrogen site location: inferred from neighbouring sites
Least-squares matrix: fullH-atom parameters constrained
R[F2 > 2σ(F2)] = 0.031w = 1/[σ2(Fo2) + (0.0337P)2 + 0.2623P] where P = (Fo2 + 2Fc2)/3
wR(F2) = 0.076(Δ/σ)max < 0.001
S = 1.03Δρmax = 0.12 e Å3
1935 reflectionsΔρmin = −0.14 e Å3
183 parametersAbsolute structure: Flack x determined using 418 quotients [(I+)-(I-)]/[(I+)+(I-)] (Parsons et al., 2013)
1 restraintAbsolute structure parameter: 0.09 (4)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
xyzUiso*/Ueq
S10.56536 (5)0.23724 (10)0.74255 (12)0.0585 (3)
O10.53351 (13)0.6345 (3)0.9109 (3)0.0608 (6)
O20.44516 (10)0.4243 (3)0.7959 (3)0.0588 (6)
O30.67048 (13)0.2149 (3)1.2961 (3)0.0702 (8)
C10.7294 (2)0.8300 (5)0.6168 (5)0.0670 (11)
H10.76870.88420.57840.080*
C20.70618 (18)0.8808 (4)0.7391 (5)0.0707 (11)
H20.72940.97100.78340.085*
C30.64887 (17)0.8002 (4)0.7975 (4)0.0566 (9)
H30.63380.83550.88140.068*
C40.61332 (15)0.6666 (4)0.7325 (4)0.0441 (7)
C50.63593 (19)0.6186 (5)0.6074 (4)0.0587 (9)
H50.61170.53200.56080.070*
C60.6949 (2)0.6995 (5)0.5506 (4)0.0696 (11)
H60.71080.66440.46720.083*
C70.55159 (15)0.5857 (4)0.8007 (3)0.0439 (7)
C80.51146 (15)0.4382 (3)0.7343 (4)0.0455 (7)
H80.50410.46850.64070.055*
C90.3949 (2)0.3296 (5)0.7185 (4)0.0718 (12)
H9A0.41290.21430.70120.108*
H9B0.38710.38940.63580.108*
H9C0.35070.32130.76630.108*
C100.59396 (18)0.2334 (4)0.9103 (4)0.0448 (8)
C110.55035 (17)0.1718 (4)1.0103 (4)0.0474 (8)
H110.50450.13480.98970.057*
C120.57361 (17)0.1641 (4)1.1405 (4)0.0493 (9)
H120.54340.12301.20680.059*
C130.64116 (18)0.2170 (4)1.1714 (4)0.0491 (9)
C140.68553 (18)0.2783 (4)1.0714 (4)0.0610 (10)
H140.73160.31431.09190.073*
C150.66189 (18)0.2860 (4)0.9429 (4)0.0550 (9)
H150.69210.32730.87670.066*
C160.6275 (2)0.1561 (6)1.4024 (4)0.0749 (11)
H16A0.65380.16391.48410.112*
H16B0.61380.03671.38710.112*
H16C0.58560.22771.40830.112*
U11U22U33U12U13U23
S10.0873 (6)0.0513 (4)0.0370 (5)0.0083 (4)−0.0003 (5)−0.0065 (5)
O10.0732 (14)0.0705 (15)0.0387 (16)0.0031 (13)0.0019 (12)−0.0129 (13)
O20.0561 (13)0.0760 (15)0.0444 (16)−0.0089 (11)0.0015 (13)−0.0003 (13)
O30.0628 (15)0.0992 (19)0.0486 (18)0.0162 (14)−0.0127 (15)0.0049 (15)
C10.056 (2)0.067 (2)0.078 (4)−0.0075 (19)−0.006 (2)0.015 (2)
C20.061 (2)0.061 (2)0.090 (4)−0.0085 (17)−0.010 (3)−0.010 (3)
C30.061 (2)0.0537 (18)0.055 (3)0.0065 (17)−0.007 (2)−0.0090 (18)
C40.0491 (16)0.0415 (14)0.042 (2)0.0075 (13)−0.0069 (16)−0.0003 (17)
C50.073 (2)0.064 (2)0.039 (2)−0.0115 (18)−0.0002 (19)−0.0035 (18)
C60.075 (2)0.083 (3)0.051 (3)−0.001 (2)0.009 (2)0.008 (2)
C70.0561 (17)0.0455 (16)0.030 (2)0.0080 (14)−0.0052 (17)0.0020 (15)
C80.0552 (17)0.0530 (16)0.0282 (17)−0.0006 (14)−0.0009 (16)0.0002 (18)
C90.070 (2)0.081 (2)0.065 (3)−0.020 (2)−0.009 (2)0.002 (2)
C100.0572 (19)0.0356 (16)0.041 (2)0.0100 (14)0.0040 (16)−0.0001 (15)
C110.0507 (18)0.0478 (18)0.044 (2)−0.0021 (14)0.0007 (16)0.0018 (16)
C120.0536 (19)0.0496 (19)0.045 (2)0.0071 (15)0.0068 (16)0.0041 (16)
C130.053 (2)0.055 (2)0.040 (2)0.0139 (16)−0.0016 (18)0.0033 (16)
C140.0455 (18)0.075 (2)0.063 (3)0.0020 (17)−0.004 (2)0.008 (2)
C150.055 (2)0.060 (2)0.050 (3)0.0023 (17)0.0125 (19)0.0059 (18)
C160.083 (2)0.103 (3)0.039 (3)0.027 (3)−0.001 (2)0.005 (2)
S1—C101.771 (4)C7—C81.511 (4)
S1—C81.841 (3)C8—H80.9800
O1—C71.217 (4)C9—H9A0.9600
O2—C81.394 (3)C9—H9B0.9600
O2—C91.421 (4)C9—H9C0.9600
O3—C131.370 (4)C10—C151.376 (5)
O3—C161.413 (5)C10—C111.380 (5)
C1—C21.361 (6)C11—C121.381 (5)
C1—C61.363 (6)C11—H110.9300
C1—H10.9300C12—C131.367 (5)
C2—C31.372 (5)C12—H120.9300
C2—H20.9300C13—C141.387 (5)
C3—C41.384 (4)C14—C151.368 (6)
C3—H30.9300C14—H140.9300
C4—C51.377 (5)C15—H150.9300
C4—C71.482 (4)C16—H16A0.9600
C5—C61.390 (5)C16—H16B0.9600
C5—H50.9300C16—H16C0.9600
C6—H60.9300
C10—S1—C8102.90 (15)O2—C9—H9A109.5
C8—O2—C9112.8 (3)O2—C9—H9B109.5
C13—O3—C16117.8 (3)H9A—C9—H9B109.5
C2—C1—C6119.8 (4)O2—C9—H9C109.5
C2—C1—H1120.1H9A—C9—H9C109.5
C6—C1—H1120.1H9B—C9—H9C109.5
C1—C2—C3120.7 (4)C15—C10—C11118.4 (3)
C1—C2—H2119.7C15—C10—S1120.2 (3)
C3—C2—H2119.7C11—C10—S1121.4 (3)
C2—C3—C4120.4 (4)C10—C11—C12121.2 (3)
C2—C3—H3119.8C10—C11—H11119.4
C4—C3—H3119.8C12—C11—H11119.4
C5—C4—C3118.6 (3)C13—C12—C11119.8 (3)
C5—C4—C7123.6 (3)C13—C12—H12120.1
C3—C4—C7117.8 (3)C11—C12—H12120.1
C4—C5—C6120.2 (4)C12—C13—O3125.3 (3)
C4—C5—H5119.9C12—C13—C14119.5 (4)
C6—C5—H5119.9O3—C13—C14115.2 (3)
C1—C6—C5120.2 (4)C15—C14—C13120.3 (4)
C1—C6—H6119.9C15—C14—H14119.8
C5—C6—H6119.9C13—C14—H14119.8
O1—C7—C4120.8 (3)C14—C15—C10120.8 (3)
O1—C7—C8119.4 (3)C14—C15—H15119.6
C4—C7—C8119.8 (3)C10—C15—H15119.6
O2—C8—C7107.8 (2)O3—C16—H16A109.5
O2—C8—S1114.0 (2)O3—C16—H16B109.5
C7—C8—S1109.2 (2)H16A—C16—H16B109.5
O2—C8—H8108.6O3—C16—H16C109.5
C7—C8—H8108.6H16A—C16—H16C109.5
S1—C8—H8108.6H16B—C16—H16C109.5
C6—C1—C2—C30.9 (6)C4—C7—C8—S174.1 (3)
C1—C2—C3—C4−0.5 (5)C10—S1—C8—O2−74.0 (3)
C2—C3—C4—C5−1.1 (5)C10—S1—C8—C746.6 (3)
C2—C3—C4—C7−179.6 (3)C8—S1—C10—C15−101.2 (3)
C3—C4—C5—C62.2 (5)C8—S1—C10—C1181.4 (3)
C7—C4—C5—C6−179.3 (3)C15—C10—C11—C120.6 (4)
C2—C1—C6—C50.2 (6)S1—C10—C11—C12178.0 (2)
C4—C5—C6—C1−1.9 (6)C10—C11—C12—C13−0.5 (5)
C5—C4—C7—O1−179.3 (3)C11—C12—C13—O3−179.7 (3)
C3—C4—C7—O1−0.8 (4)C11—C12—C13—C140.2 (5)
C5—C4—C7—C82.1 (4)C16—O3—C13—C12−1.1 (5)
C3—C4—C7—C8−179.4 (3)C16—O3—C13—C14179.1 (3)
C9—O2—C8—C7161.9 (3)C12—C13—C14—C150.1 (5)
C9—O2—C8—S1−76.7 (3)O3—C13—C14—C15179.9 (3)
O1—C7—C8—O219.8 (4)C13—C14—C15—C100.0 (5)
C4—C7—C8—O2−161.5 (2)C11—C10—C15—C14−0.3 (5)
O1—C7—C8—S1−104.5 (3)S1—C10—C15—C14−177.8 (3)
D—H···AD—HH···AD···AD—H···A
C8—H8···O1i0.982.543.406 (5)147
C16—H16C···O1ii0.962.473.421 (5)170
Table 1

Hydrogen-bond geometry (, )

DHA DHHA D A DHA
C8H8O1i 0.982.543.406(5)147
C16H16CO1ii 0.962.473.421(5)170

Symmetry codes: (i) ; (ii) .

  4 in total

1.  Conformational analysis of some N,N-diethyl-2-[(4'-substituted) phenylthio] acetamides.

Authors:  Elisângela Vinhato; Paulo R Olivato; Julio Zukerman-Schpector; Maurizio Dal Colle
Journal:  Spectrochim Acta A Mol Biomol Spectrosc       Date:  2013-07-08       Impact factor: 4.098

2.  1-Methyl-3-phenyl-sulfonyl-2-piperidone.

Authors:  Julio Zukerman-Schpector; Paulo R Olivato; Carlos R Cerqueira; Elisângela Vinhato; Edward R T Tiekink
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-04-16

3.  Crystal structure refinement with SHELXL.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr C Struct Chem       Date:  2015-01-01       Impact factor: 1.172

4.  Use of intensity quotients and differences in absolute structure refinement.

Authors:  Simon Parsons; Howard D Flack; Trixie Wagner
Journal:  Acta Crystallogr B Struct Sci Cryst Eng Mater       Date:  2013-05-17
  4 in total
  1 in total

1.  Conformationally Biased Ketones React Diastereoselectively with Allylmagnesium Halides.

Authors:  Nicole D Bartolo; Krystyna M Demkiw; Jacquelyne A Read; Elizabeth M Valentín; Yingying Yang; Alexandra M Dillon; Chunhua T Hu; Michael D Ward; K A Woerpel
Journal:  J Org Chem       Date:  2022-02-15       Impact factor: 4.198

  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.