Literature DB >> 21201697

2,4-Bis(4-fluoro-phen-yl)-3-aza-bicyclo-[3.3.1]nonan-9-one.

P Parthiban, V Ramkumar, H D Santan, Jong Tae Kim, Yeon Tae Jeong.   

Abstract

In the title compound, C(20)H(19)F(2)NO, a crystallographic mirror plane bis-ects the mol-ecule, passing through the N, O and two C atoms of the central ring system. The mol-ecule exists in a twin-chair conformation with equatorial dispositions of the 4-fluoro-phenyl groups on both sides of the secondary amino groups; the dihedral angle between the aromatic ring planes is 28.67 (3)°.

Entities:  

Year:  2008        PMID: 21201697      PMCID: PMC2960654          DOI: 10.1107/S1600536808024744

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For chemical background, see: Buxton & Roberts (1996 ▶); Evans & Seddon (1997 ▶); Ramachandran et al. (2007 ▶). For ring puckering parameters, see: Cremer & Pople (1975 ▶).

Experimental

Crystal data

C20H19F2NO M = 327.36 Orthorhombic, a = 7.6153 (3) Å b = 21.1392 (9) Å c = 10.0878 (4) Å V = 1623.95 (11) Å3 Z = 4 Mo Kα radiation μ = 0.10 mm−1 T = 298 (2) K 0.35 × 0.32 × 0.30 mm

Data collection

Bruker APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2004 ▶) T min = 0.967, T max = 0.971 11360 measured reflections 2064 independent reflections 1596 reflections with I > 2σ(I) R int = 0.020

Refinement

R[F 2 > 2σ(F 2)] = 0.041 wR(F 2) = 0.141 S = 0.91 2064 reflections 118 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.21 e Å−3 Δρmin = −0.19 e Å−3 Data collection: APEX2 (Bruker, 2004 ▶); cell refinement: SAINT (Bruker, 2004 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶); software used to prepare material for publication: SHELXL97.. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808024744/hb2763sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808024744/hb2763Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C20H19F2NOF(000) = 688
Mr = 327.36Dx = 1.339 Mg m3
Orthorhombic, PnmaMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ac 2nCell parameters from 4451 reflections
a = 7.6153 (3) Åθ = 3.4–28.0°
b = 21.1392 (9) ŵ = 0.10 mm1
c = 10.0878 (4) ÅT = 298 K
V = 1623.95 (11) Å3Block, colourless
Z = 40.35 × 0.32 × 0.30 mm
Bruker APEXII CCD diffractometer2064 independent reflections
Radiation source: fine-focus sealed tube1596 reflections with I > 2σ(I)
graphiteRint = 0.020
ω scansθmax = 28.3°, θmin = 1.9°
Absorption correction: multi-scan (SADABS; Bruker, 2004)h = −8→10
Tmin = 0.967, Tmax = 0.971k = −28→28
11360 measured reflectionsl = −13→12
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.041Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.141H atoms treated by a mixture of independent and constrained refinement
S = 0.91w = 1/[σ2(Fo2) + (0.0897P)2 + 0.3733P] where P = (Fo2 + 2Fc2)/3
2064 reflections(Δ/σ)max < 0.001
118 parametersΔρmax = 0.22 e Å3
0 restraintsΔρmin = −0.19 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.92315 (17)0.30735 (5)0.39201 (12)0.0391 (3)
H10.88390.30550.29960.047*
C20.75726 (16)0.30901 (5)0.48153 (14)0.0421 (3)
H20.68640.34600.45760.051*
C30.79266 (19)0.31054 (6)0.63140 (13)0.0473 (3)
H3A0.87010.34580.65080.057*
H3B0.68270.31810.67730.057*
C40.8751 (3)0.25000.68562 (18)0.0492 (4)
H4A0.99930.25000.66440.059*
H4B0.86420.25000.78140.059*
C50.6527 (2)0.25000.45348 (18)0.0435 (4)
C61.03437 (17)0.36590 (5)0.40791 (12)0.0400 (3)
C70.9916 (2)0.41937 (6)0.33533 (16)0.0543 (4)
H70.89760.41790.27660.065*
C81.0856 (2)0.47481 (7)0.34848 (19)0.0666 (5)
H81.05500.51070.30030.080*
C91.2238 (2)0.47573 (7)0.4334 (2)0.0643 (5)
C101.2733 (2)0.42414 (8)0.50616 (19)0.0641 (4)
H101.36880.42610.56340.077*
C111.1771 (2)0.36882 (7)0.49220 (15)0.0519 (4)
H111.20910.33310.54040.062*
F11.31755 (17)0.53023 (5)0.44594 (17)0.1030 (5)
H1111.121 (3)0.25000.369 (2)0.047 (5)*
N11.0241 (2)0.25000.41923 (15)0.0384 (3)
O10.50237 (19)0.25000.41536 (17)0.0626 (4)
U11U22U33U12U13U23
C10.0441 (7)0.0372 (6)0.0359 (6)0.0013 (5)−0.0009 (5)0.0021 (4)
C20.0395 (6)0.0368 (6)0.0500 (7)0.0045 (5)−0.0010 (5)0.0018 (5)
C30.0493 (7)0.0465 (7)0.0461 (7)−0.0017 (6)0.0077 (6)−0.0072 (5)
C40.0529 (10)0.0585 (10)0.0361 (9)0.0000.0003 (8)0.000
C50.0384 (9)0.0483 (9)0.0437 (9)0.000−0.0027 (7)0.000
C60.0440 (7)0.0352 (5)0.0406 (6)0.0016 (5)0.0073 (5)0.0021 (4)
C70.0567 (8)0.0455 (7)0.0605 (8)0.0048 (6)0.0044 (7)0.0137 (6)
C80.0694 (10)0.0390 (7)0.0915 (12)0.0051 (7)0.0242 (10)0.0157 (7)
C90.0586 (9)0.0382 (7)0.0961 (13)−0.0091 (6)0.0292 (9)−0.0104 (7)
C100.0558 (9)0.0579 (9)0.0787 (11)−0.0105 (7)0.0011 (8)−0.0110 (8)
C110.0529 (8)0.0455 (7)0.0572 (8)−0.0038 (6)−0.0029 (6)0.0043 (6)
F10.0834 (8)0.0474 (6)0.1782 (14)−0.0225 (5)0.0323 (8)−0.0170 (6)
N10.0377 (8)0.0341 (7)0.0434 (8)0.0000.0057 (6)0.000
O10.0421 (8)0.0693 (10)0.0763 (11)0.000−0.0159 (7)0.000
C1—N11.4613 (14)C5—C2i1.5067 (15)
C1—C61.5083 (16)C6—C111.381 (2)
C1—C21.5533 (18)C6—C71.3856 (17)
C1—H10.9800C7—C81.380 (2)
C2—C51.5067 (15)C7—H70.9300
C2—C31.536 (2)C8—C91.357 (3)
C2—H20.9800C8—H80.9300
C3—C41.5266 (17)C9—F11.3613 (17)
C3—H3A0.9700C9—C101.367 (3)
C3—H3B0.9700C10—C111.387 (2)
C4—C3i1.5266 (17)C10—H100.9300
C4—H4A0.9700C11—H110.9300
C4—H4B0.9700N1—C1i1.4613 (14)
C5—O11.208 (2)N1—H1110.89 (2)
N1—C1—C6111.44 (10)O1—C5—C2124.12 (7)
N1—C1—C2109.70 (10)O1—C5—C2i124.12 (7)
C6—C1—C2112.11 (9)C2—C5—C2i111.76 (14)
N1—C1—H1107.8C11—C6—C7118.28 (12)
C6—C1—H1107.8C11—C6—C1122.96 (11)
C2—C1—H1107.8C7—C6—C1118.76 (12)
C5—C2—C3107.16 (11)C8—C7—C6121.34 (15)
C5—C2—C1107.58 (11)C8—C7—H7119.3
C3—C2—C1115.47 (11)C6—C7—H7119.3
C5—C2—H2108.8C9—C8—C7118.37 (14)
C3—C2—H2108.8C9—C8—H8120.8
C1—C2—H2108.8C7—C8—H8120.8
C4—C3—C2114.02 (11)C8—C9—F1118.51 (16)
C4—C3—H3A108.7C8—C9—C10122.75 (14)
C2—C3—H3A108.7F1—C9—C10118.74 (18)
C4—C3—H3B108.7C9—C10—C11118.19 (16)
C2—C3—H3B108.7C9—C10—H10120.9
H3A—C3—H3B107.6C11—C10—H10120.9
C3i—C4—C3113.91 (16)C6—C11—C10121.05 (14)
C3i—C4—H4A108.8C6—C11—H11119.5
C3—C4—H4A108.8C10—C11—H11119.5
C3i—C4—H4B108.8C1i—N1—C1112.11 (14)
C3—C4—H4B108.8C1i—N1—H111109.1 (7)
H4A—C4—H4B107.7C1—N1—H111109.1 (7)
N1—C1—C2—C5−58.02 (14)C2—C1—C6—C7−84.10 (15)
C6—C1—C2—C5177.61 (10)C11—C6—C7—C8−1.5 (2)
N1—C1—C2—C361.57 (13)C1—C6—C7—C8178.21 (13)
C6—C1—C2—C3−62.80 (13)C6—C7—C8—C90.9 (2)
C5—C2—C3—C452.64 (16)C7—C8—C9—F1179.55 (15)
C1—C2—C3—C4−67.17 (15)C7—C8—C9—C100.0 (3)
C2—C3—C4—C3i−43.3 (2)C8—C9—C10—C11−0.2 (3)
C3—C2—C5—O1113.4 (2)F1—C9—C10—C11−179.77 (15)
C1—C2—C5—O1−121.84 (19)C7—C6—C11—C101.3 (2)
C3—C2—C5—C2i−65.39 (17)C1—C6—C11—C10−178.44 (14)
C1—C2—C5—C2i59.35 (18)C9—C10—C11—C6−0.4 (2)
N1—C1—C6—C11−27.77 (17)C6—C1—N1—C1i−174.53 (8)
C2—C1—C6—C1195.62 (15)C2—C1—N1—C1i60.72 (16)
N1—C1—C6—C7152.51 (13)
  1 in total

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1.  2,4-Bis(4-bromo-phen-yl)-3-aza-bicyclo-[3.3.1]nonan-9-one.

Authors:  P Parthiban; V Ramkumar; S Amirthaganesan; Yeon Tae Jeong
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-05-20

2.  2,4-Bis(4-chloro-phen-yl)-3-aza-bicyclo-[3.3.1]nonan-9-one.

Authors:  P Parthiban; V Ramkumar; Min Sung Kim; S Kabilan; Yeon Tae Jeong
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-02-25

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Authors:  P Parthiban; V Ramkumar; Yeon Tae Jeong
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-06-17

4.  2,4-Bis(3-chloro-phen-yl)-3-aza-bicyclo-[3.3.1]nonan-9-one.

Authors:  P Parthiban; V Ramkumar; H D Santan; Jong Tae Kim; Yeon Tae Jeong
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-03-25

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Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2014-08-30

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