Literature DB >> 21200894

N-Benzoyl-N',N''-diphenyl-guanidinium chloride.

Ghulam Murtaza, Muhammad Said, M Khawar Rauf, Ebihara Masahiro, Amin Badshah.   

Abstract

In the title compound, C(20)H(18)N(3)O(+)·Cl(-), the orientation of the aromatic rings around the planar CN(3) (+) unit produces steric hindrance. As a consequence of this particular orientation of the guanidinium cation, n class="Chemical">hydrogen bonding is restricted to N-H⋯Cl and intra-molecular N-H⋯O hydrogen bonds within the discrete unit. The guanidinium and carbonyl groups are coplanar as a result of the six-membered ring formed by the N-H⋯O intra-molecular hydrogen bond. The dihedral angles between the guanidinium plane and the two phenyl rings are 62.31 (8) and 64.24 (8)°.

Entities:  

Year:  2007        PMID: 21200894      PMCID: PMC2915374          DOI: 10.1107/S1600536807065166

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related structures, see: Said et al. (2006 ▶); Cunha et al. (2005 ▶). For related literature, see: Aldhaheri (1998 ▶); Cunha et al. (2002 ▶); Köhn et al. (2004 ▶); Moroni et al. (2001 ▶); Taniguchi et al. (1993 ▶); Yoshiizumi et al. (1998 ▶).

Experimental

Crystal data

C20H18N3O+·Cl− M = 351.82 Triclinic, a = 8.586 (4) Å b = 10.254 (5) Å c = 10.966 (6) Å α = 70.193 (10)° β = 88.612 (19)° γ = 84.524 (18)° V = 904.2 (8) Å3 Z = 2 Mo Kα radiation μ = 0.22 mm−1 T = 296 (2) K 0.50 × 0.40 × 0.25 mm

Data collection

Rigaku/MSC Mercury CCD diffractometer Absorption correction: integration (Higashi, 1999 ▶) T min = 0.653, T max = 0.803 7197 measured reflections 4050 independent reflections 3534 reflections with I > 2σ(I) R int = 0.026

Refinement

R[F 2 > 2σ(F 2)] = 0.054 wR(F 2) = 0.133 S = 1.13 4050 reflections 238 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.20 e Å−3 Δρmin = −0.32 e Å−3 Data collection: CrystalClear (Molecular Structure Corporation & Rigaku, 2001 ▶); cell refinement: CrystalClear; data reduction: TEXSAN (Molecular Structure Corporation & Rigaku, 2004 ▶); program(s) used to solve structure: SIR97 (Altomare et al., 1999 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 1997 ▶); molecular graphics: ORTEPII (Johnson, 1976 ▶); software used to prepare material for publication: SHELXL97 and TEXSAN. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536807065166/ez2109sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536807065166/ez2109Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C20H18N3O+·ClZ = 2
Mr = 351.82F000 = 368
Triclinic, P1Dx = 1.292 Mg m3
Hall symbol: -P 1Mo Kα radiation λ = 0.71070 Å
a = 8.586 (4) ÅCell parameters from 2693 reflections
b = 10.254 (5) Åθ = 3.2–27.5º
c = 10.966 (6) ŵ = 0.22 mm1
α = 70.193 (10)ºT = 296 (2) K
β = 88.612 (19)ºBlock, colourless
γ = 84.524 (18)º0.50 × 0.40 × 0.25 mm
V = 904.2 (8) Å3
Rigaku/MSC Mercury CCD diffractometer4050 independent reflections
Radiation source: fine-focus sealed tube3534 reflections with I > 2σ(I)
Monochromator: graphiteRint = 0.026
Detector resolution: 14.62 pixels mm-1θmax = 27.5º
T = 296(2) Kθmin = 3.2º
ω scansh = −8→11
Absorption correction: integration(Higashi, 1999)k = −13→8
Tmin = 0.653, Tmax = 0.803l = −14→14
7197 measured reflections
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.054H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.133  w = 1/[σ2(Fo2) + (0.0563P)2 + 0.2415P] where P = (Fo2 + 2Fc2)/3
S = 1.13(Δ/σ)max < 0.001
4050 reflectionsΔρmax = 0.20 e Å3
238 parametersΔρmin = −0.32 e Å3
Primary atom site location: structure-invariant direct methodsExtinction correction: none
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.46455 (19)0.16051 (18)0.64865 (17)0.0414 (4)
O10.56362 (16)0.06102 (15)0.68532 (14)0.0638 (4)
C20.57534 (18)0.26054 (17)0.43234 (16)0.0373 (3)
N10.46189 (16)0.25511 (16)0.52470 (14)0.0393 (3)
H10.396 (3)0.328 (3)0.505 (2)0.061 (6)*
C30.33471 (18)0.18014 (18)0.73498 (16)0.0395 (4)
C40.1942 (2)0.2597 (2)0.69126 (18)0.0467 (4)
H40.17990.31140.60380.056*
C50.0754 (2)0.2616 (2)0.7787 (2)0.0584 (5)
H5−0.01940.31370.74930.070*
C60.0966 (3)0.1873 (3)0.9083 (2)0.0649 (6)
H60.01640.18950.96630.078*
C70.2365 (3)0.1096 (3)0.9525 (2)0.0705 (7)
H70.25160.06061.04040.085*
C80.3544 (2)0.1046 (2)0.86592 (19)0.0581 (5)
H80.44770.05010.89560.070*
N20.55540 (18)0.36772 (16)0.32355 (14)0.0440 (4)
H20.487 (3)0.434 (3)0.327 (2)0.058 (6)*
C90.62383 (19)0.37844 (19)0.20058 (16)0.0409 (4)
C100.6906 (3)0.4978 (2)0.1331 (2)0.0624 (6)
H100.69490.56790.16850.075*
C110.7517 (4)0.5130 (3)0.0115 (2)0.0777 (7)
H110.79840.5934−0.03440.093*
C120.7439 (3)0.4111 (3)−0.0417 (2)0.0725 (7)
H120.78470.4221−0.12350.087*
C130.6759 (3)0.2927 (3)0.0261 (2)0.0696 (6)
H130.67080.2233−0.01010.084*
C140.6142 (2)0.2750 (2)0.1486 (2)0.0557 (5)
H140.56750.19470.19430.067*
N30.69145 (16)0.16005 (16)0.45603 (16)0.0432 (3)
H30.683 (3)0.100 (3)0.530 (2)0.065 (7)*
C150.84141 (18)0.17037 (17)0.39319 (15)0.0362 (3)
C160.9279 (2)0.27925 (19)0.38423 (18)0.0447 (4)
H160.88810.35020.41430.054*
C171.0751 (2)0.2818 (2)0.3298 (2)0.0543 (5)
H171.13410.35570.32210.065*
C181.1351 (2)0.1753 (2)0.28699 (19)0.0545 (5)
H181.23420.17760.25060.065*
C191.0488 (2)0.0662 (2)0.2980 (2)0.0538 (5)
H191.0896−0.00570.26950.065*
C200.9007 (2)0.0627 (2)0.35154 (19)0.0472 (4)
H200.8418−0.01120.35930.057*
Cl10.28841 (5)0.55341 (5)0.39536 (5)0.05030 (16)
U11U22U33U12U13U23
C10.0359 (8)0.0424 (9)0.0417 (9)0.0028 (7)0.0055 (7)−0.0107 (7)
O10.0547 (8)0.0564 (8)0.0563 (8)0.0208 (6)0.0188 (6)0.0039 (7)
C20.0352 (8)0.0393 (8)0.0386 (8)0.0002 (6)0.0047 (6)−0.0161 (7)
N10.0340 (7)0.0416 (8)0.0395 (7)0.0050 (6)0.0055 (5)−0.0125 (6)
C30.0341 (8)0.0440 (9)0.0396 (9)0.0005 (6)0.0047 (6)−0.0144 (7)
C40.0396 (9)0.0544 (11)0.0423 (9)0.0060 (7)0.0012 (7)−0.0144 (8)
C50.0384 (9)0.0706 (14)0.0621 (13)0.0097 (9)0.0065 (8)−0.0213 (11)
C60.0529 (11)0.0769 (15)0.0576 (12)0.0057 (10)0.0225 (10)−0.0179 (11)
C70.0669 (13)0.0857 (17)0.0422 (11)0.0154 (12)0.0141 (9)−0.0065 (11)
C80.0480 (10)0.0712 (13)0.0422 (10)0.0151 (9)0.0035 (8)−0.0078 (9)
N20.0470 (8)0.0434 (8)0.0373 (8)0.0104 (6)0.0062 (6)−0.0124 (6)
C90.0390 (8)0.0474 (9)0.0326 (8)0.0079 (7)0.0002 (6)−0.0119 (7)
C100.0884 (16)0.0496 (11)0.0458 (11)−0.0048 (10)0.0140 (10)−0.0131 (9)
C110.1051 (19)0.0655 (15)0.0467 (12)−0.0023 (13)0.0217 (12)−0.0014 (11)
C120.0776 (15)0.0892 (18)0.0357 (10)0.0264 (13)0.0086 (10)−0.0114 (11)
C130.0798 (15)0.0849 (17)0.0535 (13)0.0119 (13)−0.0008 (11)−0.0407 (13)
C140.0594 (12)0.0614 (12)0.0509 (11)−0.0040 (9)0.0045 (9)−0.0257 (10)
N30.0373 (7)0.0417 (8)0.0443 (8)0.0049 (6)0.0100 (6)−0.0092 (7)
C150.0327 (7)0.0409 (8)0.0334 (8)0.0041 (6)0.0033 (6)−0.0128 (6)
C160.0467 (9)0.0414 (9)0.0474 (10)0.0012 (7)0.0027 (7)−0.0184 (8)
C170.0442 (10)0.0547 (11)0.0598 (12)−0.0093 (8)0.0040 (8)−0.0129 (9)
C180.0374 (9)0.0683 (13)0.0482 (11)0.0048 (8)0.0098 (8)−0.0103 (9)
C190.0481 (10)0.0619 (12)0.0534 (11)0.0141 (9)0.0065 (8)−0.0275 (10)
C200.0436 (9)0.0475 (10)0.0559 (11)0.0013 (7)0.0023 (8)−0.0262 (9)
Cl10.0488 (3)0.0513 (3)0.0533 (3)0.01300 (19)−0.00668 (19)−0.0253 (2)
C1—O11.224 (2)C10—C111.385 (3)
C1—N11.376 (2)C10—H100.9300
C1—C31.488 (2)C11—C121.365 (4)
C2—N21.321 (2)C11—H110.9300
C2—N31.326 (2)C12—C131.367 (4)
C2—N11.379 (2)C12—H120.9300
N1—H10.86 (2)C13—C141.392 (3)
C3—C81.387 (3)C13—H130.9300
C3—C41.387 (2)C14—H140.9300
C4—C51.386 (3)N3—C151.441 (2)
C4—H40.9300N3—H30.84 (3)
C5—C61.373 (3)C15—C161.374 (3)
C5—H50.9300C15—C201.381 (2)
C6—C71.377 (3)C16—C171.383 (3)
C6—H60.9300C16—H160.9300
C7—C81.380 (3)C17—C181.381 (3)
C7—H70.9300C17—H170.9300
C8—H80.9300C18—C191.371 (3)
N2—C91.432 (2)C18—H180.9300
N2—H20.86 (2)C19—C201.386 (3)
C9—C101.369 (3)C19—H190.9300
C9—C141.374 (3)C20—H200.9300
O1—C1—N1122.33 (15)C11—C10—H10120.3
O1—C1—C3121.03 (16)C12—C11—C10120.6 (2)
N1—C1—C3116.55 (14)C12—C11—H11119.7
N2—C2—N3125.14 (15)C10—C11—H11119.7
N2—C2—N1115.35 (14)C11—C12—C13119.7 (2)
N3—C2—N1119.49 (15)C11—C12—H12120.2
C1—N1—C2125.74 (14)C13—C12—H12120.2
C1—N1—H1119.5 (15)C12—C13—C14120.7 (2)
C2—N1—H1113.5 (15)C12—C13—H13119.6
C8—C3—C4119.34 (16)C14—C13—H13119.6
C8—C3—C1116.33 (15)C9—C14—C13118.7 (2)
C4—C3—C1124.15 (16)C9—C14—H14120.7
C5—C4—C3119.63 (18)C13—C14—H14120.7
C5—C4—H4120.2C2—N3—C15125.89 (15)
C3—C4—H4120.2C2—N3—H3111.2 (17)
C6—C5—C4120.55 (18)C15—N3—H3119.3 (17)
C6—C5—H5119.7C16—C15—C20121.04 (16)
C4—C5—H5119.7C16—C15—N3120.56 (15)
C5—C6—C7120.06 (18)C20—C15—N3118.21 (16)
C5—C6—H6120.0C15—C16—C17119.03 (17)
C7—C6—H6120.0C15—C16—H16120.5
C6—C7—C8119.8 (2)C17—C16—H16120.5
C6—C7—H7120.1C18—C17—C16120.43 (19)
C8—C7—H7120.1C18—C17—H17119.8
C7—C8—C3120.55 (19)C16—C17—H17119.8
C7—C8—H8119.7C19—C18—C17120.10 (17)
C3—C8—H8119.7C19—C18—H18120.0
C2—N2—C9126.71 (15)C17—C18—H18120.0
C2—N2—H2115.2 (15)C18—C19—C20120.09 (18)
C9—N2—H2117.8 (15)C18—C19—H19120.0
C10—C9—C14120.97 (18)C20—C19—H19120.0
C10—C9—N2118.28 (17)C15—C20—C19119.30 (18)
C14—C9—N2120.63 (17)C15—C20—H20120.3
C9—C10—C11119.3 (2)C19—C20—H20120.3
C9—C10—H10120.3
O1—C1—N1—C2−7.5 (3)C14—C9—C10—C11−1.1 (3)
C3—C1—N1—C2175.92 (16)N2—C9—C10—C11−177.3 (2)
N2—C2—N1—C1−174.26 (17)C9—C10—C11—C120.8 (4)
N3—C2—N1—C17.2 (3)C10—C11—C12—C13−0.3 (4)
O1—C1—C3—C816.6 (3)C11—C12—C13—C140.1 (4)
N1—C1—C3—C8−166.76 (18)C10—C9—C14—C130.9 (3)
O1—C1—C3—C4−158.4 (2)N2—C9—C14—C13176.99 (18)
N1—C1—C3—C418.2 (3)C12—C13—C14—C9−0.4 (3)
C8—C3—C4—C5−0.5 (3)N2—C2—N3—C1523.2 (3)
C1—C3—C4—C5174.43 (19)N1—C2—N3—C15−158.45 (16)
C3—C4—C5—C61.0 (3)C2—N3—C15—C1650.4 (3)
C4—C5—C6—C7−0.2 (4)C2—N3—C15—C20−134.56 (19)
C5—C6—C7—C8−1.2 (4)C20—C15—C16—C171.5 (3)
C6—C7—C8—C31.7 (4)N3—C15—C16—C17176.39 (17)
C4—C3—C8—C7−0.9 (3)C15—C16—C17—C18−1.0 (3)
C1—C3—C8—C7−176.2 (2)C16—C17—C18—C190.1 (3)
N3—C2—N2—C918.6 (3)C17—C18—C19—C200.4 (3)
N1—C2—N2—C9−159.87 (16)C16—C15—C20—C19−1.0 (3)
C2—N2—C9—C10−133.2 (2)N3—C15—C20—C19−176.09 (17)
C2—N2—C9—C1450.6 (3)C18—C19—C20—C150.1 (3)
D—H···AD—HH···AD···AD—H···A
N1—H1···Cl10.86 (2)2.32 (3)3.143 (2)159 (2)
N2—H2···Cl10.86 (2)2.27 (2)3.0977 (18)162 (2)
N3—H3···O10.84 (3)1.91 (3)2.628 (2)143 (2)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1⋯Cl10.86 (2)2.32 (3)3.143 (2)159 (2)
N2—H2⋯Cl10.86 (2)2.27 (2)3.0977 (18)162 (2)
N3—H3⋯O10.84 (3)1.91 (3)2.628 (2)143 (2)
  5 in total

1.  First synthesis of totally orthogonal protected alpha-(trifluoromethyl)- and alpha-(difluoromethyl)arginines.

Authors:  M Moroni; B Koksch; S N Osipov; M Crucianelli; M Frigerio; P Bravo; K Burger
Journal:  J Org Chem       Date:  2001-01-12       Impact factor: 4.354

2.  SHELXL: high-resolution refinement.

Authors:  G M Sheldrick; T R Schneider
Journal:  Methods Enzymol       Date:  1997       Impact factor: 1.600

3.  Biologically selective potassium channel openers having 1,1-diethylpropyl group.

Authors:  K Yoshiizumi; N Seko; N Nishimura; S Ikeda; K Yoshino; H Kondo; K Tanizawa
Journal:  Bioorg Med Chem Lett       Date:  1998-12-01       Impact factor: 2.823

4.  The extraction equilibria of the ion associate of periodate with 1-(3,5-diamino-6-chloropyrazinecarboxyl) guanidine.

Authors:  S M Aldhaheri
Journal:  Talanta       Date:  1998-08       Impact factor: 6.057

5.  Synthesis and antiinflammatory and analgesic properties of 2-amino-1H-benzimidazole and 1,2-dihydro-2-iminocycloheptimidazole derivatives.

Authors:  K Taniguchi; S Shigenaga; T Ogahara; T Fujitsu; M Matsuo
Journal:  Chem Pharm Bull (Tokyo)       Date:  1993-02       Impact factor: 1.645

  5 in total
  3 in total

1.  2-Benzoyl-1-(2,4-dichloro-phen-yl)-3-phenyl-guanidine.

Authors:  Ghulam Murtaza; Masahiro Ebihara; Muhammad Said; M Khawar Rauf; Saeed Anwar
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-08-29

2.  2-Benzoyl-1,1-diethyl-3-phenyl-guanidine.

Authors:  Ghulam Murtaza; M Khawar Rauf; Masahiro Ebihara; Amin Badshah
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-01-17

3.  (Z)-2-Phenyl-3-pivaloyl-1,1-dipropyl-guanidine.

Authors:  Muhammad Said; Ghulam Murtaza; Eva Freisinger; Saeed Anwar; Abdur Rauf
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-08-08
  3 in total

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