Literature DB >> 21147846

Identifying therapeutic targets in a combined EGFR-TGFβR signalling cascade using a multiscale agent-based cancer model.

Zhihui Wang1, Veronika Bordas, Jonathan Sagotsky, Thomas S Deisboeck.   

Abstract

Applying a previously developed non-small cell lung cancer model, we assess 'cross-scale' the therapeutic efficacy of targeting a variety of molecular components of the epidermal growth factor receptor (EGFR) signalling pathway. Simulation of therapeutic inhibition and amplification allows for the ranking of the implemented downstream EGFR signalling molecules according to their therapeutic values or indices. Analysis identifies mitogen-activated protein kinase and extracellular signal-regulated kinase as top therapeutic targets for both inhibition and amplification-based treatment regimen but indicates that combined parameter perturbations do not necessarily improve the therapeutic effect of the separate parameter treatments as much as might be expected. Potential future strategies using this in silico model to tailor molecular treatment regimen are discussed.

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Year:  2010        PMID: 21147846      PMCID: PMC3499073          DOI: 10.1093/imammb/dqq023

Source DB:  PubMed          Journal:  Math Med Biol        ISSN: 1477-8599            Impact factor:   1.854


  24 in total

1.  Identification of nucleocytoplasmic cycling as a remote sensor in cellular signaling by databased modeling.

Authors:  I Swameye; T G Muller; J Timmer; O Sandra; U Klingmuller
Journal:  Proc Natl Acad Sci U S A       Date:  2003-01-27       Impact factor: 11.205

Review 2.  Inhibitors of growth factor signalling.

Authors:  A E Wakeling
Journal:  Endocr Relat Cancer       Date:  2005-07       Impact factor: 5.678

3.  Locomotion and proliferation of glioblastoma cells in vitro: statistical evaluation of videomicroscopic observations.

Authors:  B Hegedüs; A Czirók; I Fazekas; T B'abel; E Madar'asz; T Vicsek
Journal:  J Neurosurg       Date:  2000-03       Impact factor: 5.115

4.  Control of MAPK signalling: from complexity to what really matters.

Authors:  Jorrit J Hornberg; Bernd Binder; Frank J Bruggeman; Birgit Schoeberl; Reinhart Heinrich; Hans V Westerhoff
Journal:  Oncogene       Date:  2005-08-25       Impact factor: 9.867

Review 5.  Current knowledge and future directions of the selective epidermal growth factor receptor inhibitors erlotinib (Tarceva) and gefitinib (Iressa).

Authors:  Wandena S Siegel-Lakhai; Jos H Beijnen; Jan H M Schellens
Journal:  Oncologist       Date:  2005-09

Review 6.  Epidermal growth factor receptor mutations in non-small-cell lung cancer: implications for treatment and tumor biology.

Authors:  Pasi A Jänne; Jeffrey A Engelman; Bruce E Johnson
Journal:  J Clin Oncol       Date:  2005-05-10       Impact factor: 44.544

7.  Comparative study of parameter sensitivity analyses of the TCR-activated Erk-MAPK signalling pathway.

Authors:  Y Zhang; A Rundell
Journal:  Syst Biol (Stevenage)       Date:  2006-07

8.  Cross-scale, cross-pathway evaluation using an agent-based non-small cell lung cancer model.

Authors:  Zhihui Wang; Christina M Birch; Jonathan Sagotsky; Thomas S Deisboeck
Journal:  Bioinformatics       Date:  2009-07-04       Impact factor: 6.937

9.  Induction of cancer cell migration by epidermal growth factor is initiated by specific phosphorylation of tyrosine 1248 of c-erbB-2 receptor via EGFR.

Authors:  Thomas Dittmar; Anja Husemann; Yvonne Schewe; Jerzy-Roch Nofer; Bernd Niggemann; Kurt S Zänker; Burkhard H Brandt
Journal:  FASEB J       Date:  2002-09-19       Impact factor: 5.191

10.  Epidermal growth factor receptor in non-small-cell lung carcinomas: correlation between gene copy number and protein expression and impact on prognosis.

Authors:  Fred R Hirsch; Marileila Varella-Garcia; Paul A Bunn; Michael V Di Maria; Robert Veve; Roy M Bremmes; Anna E Barón; Chan Zeng; Wilbur A Franklin
Journal:  J Clin Oncol       Date:  2003-09-02       Impact factor: 44.544

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  15 in total

Review 1.  Integrated PK-PD and agent-based modeling in oncology.

Authors:  Zhihui Wang; Joseph D Butner; Vittorio Cristini; Thomas S Deisboeck
Journal:  J Pharmacokinet Pharmacodyn       Date:  2015-01-15       Impact factor: 2.745

2.  Discovering Molecular Targets in Cancer with Multiscale Modeling.

Authors:  Zhihui Wang; Veronika Bordas; Thomas S Deisboeck
Journal:  Drug Dev Res       Date:  2011-02-01       Impact factor: 4.360

Review 3.  Simulating cancer growth with multiscale agent-based modeling.

Authors:  Zhihui Wang; Joseph D Butner; Romica Kerketta; Vittorio Cristini; Thomas S Deisboeck
Journal:  Semin Cancer Biol       Date:  2014-05-02       Impact factor: 15.707

Review 4.  Multiscale models of breast cancer progression.

Authors:  Anirikh Chakrabarti; Scott Verbridge; Abraham D Stroock; Claudia Fischbach; Jeffrey D Varner
Journal:  Ann Biomed Eng       Date:  2012-09-25       Impact factor: 3.934

5.  Strategies for efficient numerical implementation of hybrid multi-scale agent-based models to describe biological systems.

Authors:  Nicholas A Cilfone; Denise E Kirschner; Jennifer J Linderman
Journal:  Cell Mol Bioeng       Date:  2015-03       Impact factor: 2.321

Review 6.  Computational systems biology approaches to anti-angiogenic cancer therapeutics.

Authors:  Stacey D Finley; Liang-Hui Chu; Aleksander S Popel
Journal:  Drug Discov Today       Date:  2014-10-05       Impact factor: 7.851

Review 7.  Accelerating cancer systems biology research through Semantic Web technology.

Authors:  Zhihui Wang; Jonathan Sagotsky; Thomas Taylor; Patrick Shironoshita; Thomas S Deisboeck
Journal:  Wiley Interdiscip Rev Syst Biol Med       Date:  2012-11-27

8.  Development of a sampling-based global sensitivity analysis workflow for multiscale computational cancer models.

Authors:  Zhihui Wang; Thomas S Deisboeck; Vittorio Cristini
Journal:  IET Syst Biol       Date:  2014-10       Impact factor: 1.615

9.  Impact of diffusion barriers to small cytotoxic molecules on the efficacy of immunotherapy in breast cancer.

Authors:  Hiranmoy Das; Zhihui Wang; M Khalid Khan Niazi; Reeva Aggarwal; Jingwei Lu; Suman Kanji; Manjusri Das; Matthew Joseph; Metin Gurcan; Vittorio Cristini
Journal:  PLoS One       Date:  2013-04-19       Impact factor: 3.240

10.  Dealing with diversity in computational cancer modeling.

Authors:  David Johnson; Steve McKeever; Georgios Stamatakos; Dimitra Dionysiou; Norbert Graf; Vangelis Sakkalis; Konstantinos Marias; Zhihui Wang; Thomas S Deisboeck
Journal:  Cancer Inform       Date:  2013-05-07
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