Literature DB >> 25588379

Integrated PK-PD and agent-based modeling in oncology.

Zhihui Wang1, Joseph D Butner, Vittorio Cristini, Thomas S Deisboeck.   

Abstract

Mathematical modeling has become a valuable tool that strives to complement conventional biomedical research modalities in order to predict experimental outcome, generate new medical hypotheses, and optimize clinical therapies. Two specific approaches, pharmacokinetic-pharmacodynamic (PK-PD) modeling, and agent-based modeling (ABM), have been widely applied in cancer research. While they have made important contributions on their own (e.g., PK-PD in examining chemotherapy drug efficacy and resistance, and ABM in describing and predicting tumor growth and metastasis), only a few groups have started to combine both approaches together in an effort to gain more insights into the details of drug dynamics and the resulting impact on tumor growth. In this review, we focus our discussion on some of the most recent modeling studies building on a combined PK-PD and ABM approach that have generated experimentally testable hypotheses. Some future directions are also discussed.

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Year:  2015        PMID: 25588379      PMCID: PMC4985529          DOI: 10.1007/s10928-015-9403-7

Source DB:  PubMed          Journal:  J Pharmacokinet Pharmacodyn        ISSN: 1567-567X            Impact factor:   2.745


  87 in total

1.  Antitumor activity of targeted and cytotoxic agents in murine subcutaneous tumor models correlates with clinical response.

Authors:  Harvey Wong; Edna F Choo; Bruno Alicke; Xiao Ding; Hank La; Erin McNamara; Frank-Peter Theil; Jay Tibbitts; Lori S Friedman; Cornelis E C A Hop; Stephen E Gould
Journal:  Clin Cancer Res       Date:  2012-05-30       Impact factor: 12.531

Review 2.  The virtual cell--a candidate co-ordinator for 'middle-out' modelling of biological systems.

Authors:  Dawn C Walker; Jennifer Southgate
Journal:  Brief Bioinform       Date:  2009-03-17       Impact factor: 11.622

3.  Tumour resistance to cisplatin: a modelling approach.

Authors:  L Marcu; E Bezak; I Olver; T van Doorn
Journal:  Phys Med Biol       Date:  2005-01-07       Impact factor: 3.609

Review 4.  Basic concepts of pharmacokinetic/pharmacodynamic (PK/PD) modelling.

Authors:  B Meibohm; H Derendorf
Journal:  Int J Clin Pharmacol Ther       Date:  1997-10       Impact factor: 1.366

5.  The effect of interstitial pressure on therapeutic agent transport: coupling with the tumor blood and lymphatic vascular systems.

Authors:  Min Wu; Hermann B Frieboes; Mark A J Chaplain; Steven R McDougall; Vittorio Cristini; John S Lowengrub
Journal:  J Theor Biol       Date:  2014-04-19       Impact factor: 2.691

6.  Mechanistic pharmacokinetic/pharmacodynamic modeling of in vivo tumor uptake, catabolism, and tumor response of trastuzumab maytansinoid conjugates.

Authors:  Russ Wada; Hans K Erickson; Gail D Lewis Phillips; Carmela A Provenzano; Douglas D Leipold; Elaine Mai; Holly Johnson; Jay Tibbitts
Journal:  Cancer Chemother Pharmacol       Date:  2014-09-04       Impact factor: 3.333

7.  Simulating the hallmarks of cancer.

Authors:  Robert G Abbott; Stephanie Forrest; Kenneth J Pienta
Journal:  Artif Life       Date:  2006       Impact factor: 0.667

8.  Identifying therapeutic targets in a combined EGFR-TGFβR signalling cascade using a multiscale agent-based cancer model.

Authors:  Zhihui Wang; Veronika Bordas; Jonathan Sagotsky; Thomas S Deisboeck
Journal:  Math Med Biol       Date:  2010-12-08       Impact factor: 1.854

9.  Nonlinear modelling of cancer: bridging the gap between cells and tumours.

Authors:  J S Lowengrub; H B Frieboes; F Jin; Y-L Chuang; X Li; P Macklin; S M Wise; V Cristini
Journal:  Nonlinearity       Date:  2010

10.  Modeling tumor response after combined administration of different immune-stimulatory agents.

Authors:  Zinnia P Parra-Guillen; Pedro Berraondo; Benjamin Ribba; Iñaki F Trocóniz
Journal:  J Pharmacol Exp Ther       Date:  2013-07-11       Impact factor: 4.030

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  24 in total

1.  Predicting breast cancer response to neoadjuvant chemotherapy based on tumor vascular features in needle biopsies.

Authors:  Terisse A Brocato; Ursa Brown-Glaberman; Zhihui Wang; Reed G Selwyn; Colin M Wilson; Edward F Wyckoff; Lesley C Lomo; Jennifer L Saline; Anupama Hooda-Nehra; Renata Pasqualini; Wadih Arap; C Jeffrey Brinker; Vittorio Cristini
Journal:  JCI Insight       Date:  2019-03-05

Review 2.  Mathematical modeling of tumor-immune cell interactions.

Authors:  Grace E Mahlbacher; Kara C Reihmer; Hermann B Frieboes
Journal:  J Theor Biol       Date:  2019-03-02       Impact factor: 2.691

3.  Evaluation of uptake and distribution of gold nanoparticles in solid tumors.

Authors:  Christopher G England; André M Gobin; Hermann B Frieboes
Journal:  Eur Phys J Plus       Date:  2015-11-19       Impact factor: 3.911

Review 4.  Pharmacokinetics of metronomic chemotherapy: a neglected but crucial aspect.

Authors:  Guido Bocci; Robert S Kerbel
Journal:  Nat Rev Clin Oncol       Date:  2016-05-17       Impact factor: 66.675

5.  Editorial: Special Section on Multiscale Cancer Modeling.

Authors:  Zhihui Wang; Philip K Maini
Journal:  IEEE Trans Biomed Eng       Date:  2017-02-22       Impact factor: 4.538

6.  Development of a Physiologically-Based Mathematical Model for Quantifying Nanoparticle Distribution in Tumors.

Authors:  Prashant Dogra; Yao-Li Chuang; Joseph D Butner; Vittorio Cristini; Zhihui Wang
Journal:  Conf Proc IEEE Eng Med Biol Soc       Date:  2019-07

7.  Mathematical Modeling to Address Challenges in Pancreatic Cancer.

Authors:  Prashant Dogra; Javier R Ramírez; María J Peláez; Zhihui Wang; Vittorio Cristini; Gulshan Parasher; Manmeet Rawat
Journal:  Curr Top Med Chem       Date:  2020       Impact factor: 3.295

8.  Simulation of the Protein-Shedding Kinetics of a Fully Vascularized Tumor.

Authors:  Hermann B Frieboes; Louis T Curtis; Min Wu; Kian Kani; Parag Mallick
Journal:  Cancer Inform       Date:  2015-12-20

9.  Applying optimization algorithms to tuberculosis antibiotic treatment regimens.

Authors:  Joseph M Cicchese; Elsje Pienaar; Denise E Kirschner; Jennifer J Linderman
Journal:  Cell Mol Bioeng       Date:  2017-08-30       Impact factor: 2.321

10.  Theory and Experimental Validation of a Spatio-temporal Model of Chemotherapy Transport to Enhance Tumor Cell Kill.

Authors:  Zhihui Wang; Romica Kerketta; Yao-Li Chuang; Prashant Dogra; Joseph D Butner; Terisse A Brocato; Armin Day; Rong Xu; Haifa Shen; Eman Simbawa; A S Al-Fhaid; S R Mahmoud; Steven A Curley; Mauro Ferrari; Eugene J Koay; Vittorio Cristini
Journal:  PLoS Comput Biol       Date:  2016-06-10       Impact factor: 4.475

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