Literature DB >> 21111604

Charting the genetic interaction map of a cell.

Michael Costanzo1, Anastasia Baryshnikova, Chad L Myers, Brenda Andrews, Charles Boone.   

Abstract

Genome sequencing projects have revealed a massive catalog of genes and astounding genetic diversity in a variety of organisms. We are now faced with the formidable challenge of assigning functions to thousands of genes, and how to use this information to understand how genes interact and coordinate cell function. Studies indicate that the majority of eukaryotic genes are dispensable, highlighting the extensive buffering of genomes against genetic and environmental perturbations. Such robustness poses a significant challenge to those seeking to understand the wiring diagram of the cell. Genome-scale screens for genetic interactions are an effective means to chart the network that underlies this functional redundancy. A complete atlas of genetic interactions offers the potential to assign functions to most genes identified by whole genome sequencing projects and to delineate a functional wiring diagram of the cell. Perhaps more importantly, mapping genetic networks on a large-scale will shed light on the general principles and rules governing genetic networks and provide valuable information regarding the important but elusive relationship between genotype and phenotype.
Copyright © 2010 Elsevier Ltd. All rights reserved.

Mesh:

Year:  2010        PMID: 21111604     DOI: 10.1016/j.copbio.2010.11.001

Source DB:  PubMed          Journal:  Curr Opin Biotechnol        ISSN: 0958-1669            Impact factor:   9.740


  53 in total

1.  The Catalytic Activity of the Ubp3 Deubiquitinating Protease Is Required for Efficient Stress Granule Assembly in Saccharomyces cerevisiae.

Authors:  Regina Nostramo; Sapna N Varia; Bo Zhang; Megan M Emerson; Paul K Herman
Journal:  Mol Cell Biol       Date:  2015-10-26       Impact factor: 4.272

Review 2.  Regulation of recombination and genomic maintenance.

Authors:  Wolf-Dietrich Heyer
Journal:  Cold Spring Harb Perspect Biol       Date:  2015-08-03       Impact factor: 10.005

3.  Ascochyta blight disease of pea (Pisum sativum L.): defence-related candidate genes associated with QTL regions and identification of epistatic QTL.

Authors:  Gail M Timmerman-Vaughan; Leire Moya; Tonya J Frew; Sarah R Murray; Ross Crowhurst
Journal:  Theor Appl Genet       Date:  2016-01-22       Impact factor: 5.699

4.  Mapping a diversity of genetic interactions in yeast.

Authors:  Jolanda van Leeuwen; Charles Boone; Brenda J Andrews
Journal:  Curr Opin Syst Biol       Date:  2017-08-12

Review 5.  The value of mechanistic biophysical information for systems-level understanding of complex biological processes such as cytokinesis.

Authors:  Thomas D Pollard
Journal:  Biophys J       Date:  2014-12-02       Impact factor: 4.033

6.  Costs and benefits of mutational robustness in RNA viruses.

Authors:  Adi Stern; Simone Bianco; Ming Te Yeh; Caroline Wright; Kristin Butcher; Chao Tang; Rasmus Nielsen; Raul Andino
Journal:  Cell Rep       Date:  2014-08-07       Impact factor: 9.423

7.  Transfer of the Septin Ring to Cytokinetic Remnants in ER Stress Directs Age-Sensitive Cell-Cycle Re-entry.

Authors:  Jesse T Chao; Francisco Piña; Masayuki Onishi; Yifat Cohen; Ya-Shiuan Lai; Maya Schuldiner; Maho Niwa
Journal:  Dev Cell       Date:  2019-09-26       Impact factor: 12.270

8.  Discovery of genes involved in mitosis, cell division, cell wall integrity and chromosome segregation through construction of Schizosaccharomyces pombe deletion strains.

Authors:  Jun-Song Chen; Janel R Beckley; Liping Ren; Anna Feoktistova; Michael A Jensen; Nicholas Rhind; Kathleen L Gould
Journal:  Yeast       Date:  2016-06-29       Impact factor: 3.239

Review 9.  Population perspectives on functional genomic variation in yeast.

Authors:  Daniel A Skelly; Paul M Magwene
Journal:  Brief Funct Genomics       Date:  2015-10-14       Impact factor: 4.241

10.  The Saccharomyces cerevisiae chromatin remodeler Fun30 regulates DNA end resection and checkpoint deactivation.

Authors:  Vinay V Eapen; Neal Sugawara; Michael Tsabar; Wei-Hua Wu; James E Haber
Journal:  Mol Cell Biol       Date:  2012-09-24       Impact factor: 4.272

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.