Literature DB >> 26238353

Regulation of recombination and genomic maintenance.

Wolf-Dietrich Heyer1.   

Abstract

Recombination is a central process to stably maintain and transmit a genome through somatic cell divisions and to new generations. Hence, recombination needs to be coordinated with other events occurring on the DNA template, such as DNA replication, transcription, and the specialized chromosomal functions at centromeres and telomeres. Moreover, regulation with respect to the cell-cycle stage is required as much as spatiotemporal coordination within the nuclear volume. These regulatory mechanisms impinge on the DNA substrate through modifications of the chromatin and directly on recombination proteins through a myriad of posttranslational modifications (PTMs) and additional mechanisms. Although recombination is primarily appreciated to maintain genomic stability, the process also contributes to gross chromosomal arrangements and copy-number changes. Hence, the recombination process itself requires quality control to ensure high fidelity and avoid genomic instability. Evidently, recombination and its regulatory processes have significant impact on human disease, specifically cancer and, possibly, neurodegenerative diseases.
Copyright © 2015 Cold Spring Harbor Laboratory Press; all rights reserved.

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Year:  2015        PMID: 26238353      PMCID: PMC4526751          DOI: 10.1101/cshperspect.a016501

Source DB:  PubMed          Journal:  Cold Spring Harb Perspect Biol        ISSN: 1943-0264            Impact factor:   10.005


  227 in total

Review 1.  DNA helicases required for homologous recombination and repair of damaged replication forks.

Authors:  Leonard Wu; Ian D Hickson
Journal:  Annu Rev Genet       Date:  2006       Impact factor: 16.830

Review 2.  Some disassembly required: role of DNA translocases in the disruption of recombination intermediates and dead-end complexes.

Authors:  Lorraine S Symington; Wolf-Dietrich Heyer
Journal:  Genes Dev       Date:  2006-09-15       Impact factor: 11.361

Review 3.  DNA-pairing and annealing processes in homologous recombination and homology-directed repair.

Authors:  Scott W Morrical
Journal:  Cold Spring Harb Perspect Biol       Date:  2015-02-02       Impact factor: 10.005

Review 4.  Nucleosome remodelers in double-strand break repair.

Authors:  Andrew Seeber; Michael Hauer; Susan M Gasser
Journal:  Curr Opin Genet Dev       Date:  2013-01-23       Impact factor: 5.578

Review 5.  Mutations arising during repair of chromosome breaks.

Authors:  Anna Malkova; James E Haber
Journal:  Annu Rev Genet       Date:  2012       Impact factor: 16.830

6.  Rad54, a Swi2/Snf2-like recombinational repair protein, disassembles Rad51:dsDNA filaments.

Authors:  Jachen A Solinger; Konstantin Kiianitsa; Wolf-Dietrich Heyer
Journal:  Mol Cell       Date:  2002-11       Impact factor: 17.970

7.  Physical interaction of RECQ5 helicase with RAD51 facilitates its anti-recombinase activity.

Authors:  Sybille Schwendener; Steven Raynard; Shreya Paliwal; Anita Cheng; Radhakrishnan Kanagaraj; Igor Shevelev; Jeremy M Stark; Patrick Sung; Pavel Janscak
Journal:  J Biol Chem       Date:  2010-03-25       Impact factor: 5.157

8.  Recovery from checkpoint-mediated arrest after repair of a double-strand break requires Srs2 helicase.

Authors:  Moreshwar B Vaze; Achille Pellicioli; Sang Eun Lee; Grzegorz Ira; Giordano Liberi; Ayelet Arbel-Eden; Marco Foiani; James E Haber
Journal:  Mol Cell       Date:  2002-08       Impact factor: 17.970

9.  Cell cycle regulation of DNA double-strand break end resection by Cdk1-dependent Dna2 phosphorylation.

Authors:  Xuefeng Chen; Hengyao Niu; Woo-Hyun Chung; Zhu Zhu; Alma Papusha; Eun Yong Shim; Sang Eun Lee; Patrick Sung; Grzegorz Ira
Journal:  Nat Struct Mol Biol       Date:  2011-08-14       Impact factor: 15.369

10.  The Fun30 nucleosome remodeller promotes resection of DNA double-strand break ends.

Authors:  Xuefeng Chen; Dandan Cui; Alma Papusha; Xiaotian Zhang; Chia-Dwo Chu; Jiangwu Tang; Kaifu Chen; Xuewen Pan; Grzegorz Ira
Journal:  Nature       Date:  2012-09-09       Impact factor: 49.962

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  49 in total

1.  Small-molecule inhibitors identify the RAD52-ssDNA interaction as critical for recovery from replication stress and for survival of BRCA2 deficient cells.

Authors:  Sarah R Hengel; Eva Malacaria; Laura Folly da Silva Constantino; Fletcher E Bain; Andrea Diaz; Brandon G Koch; Liping Yu; Meng Wu; Pietro Pichierri; M Ashley Spies; Maria Spies
Journal:  Elife       Date:  2016-07-19       Impact factor: 8.140

Review 2.  Guidelines for DNA recombination and repair studies: Mechanistic assays of DNA repair processes.

Authors:  Hannah L Klein; Kenny K H Ang; Michelle R Arkin; Emily C Beckwitt; Yi-Hsuan Chang; Jun Fan; Youngho Kwon; Michael J Morten; Sucheta Mukherjee; Oliver J Pambos; Hafez El Sayyed; Elizabeth S Thrall; João P Vieira-da-Rocha; Quan Wang; Shuang Wang; Hsin-Yi Yeh; Julie S Biteen; Peter Chi; Wolf-Dietrich Heyer; Achillefs N Kapanidis; Joseph J Loparo; Terence R Strick; Patrick Sung; Bennett Van Houten; Hengyao Niu; Eli Rothenberg
Journal:  Microb Cell       Date:  2019-01-07

Review 3.  Microhomology-mediated end joining: Good, bad and ugly.

Authors:  Ja-Hwan Seol; Eun Yong Shim; Sang Eun Lee
Journal:  Mutat Res       Date:  2017-07-16       Impact factor: 2.433

Review 4.  RecQ and Fe-S helicases have unique roles in DNA metabolism dictated by their unwinding directionality, substrate specificity, and protein interactions.

Authors:  Katrina N Estep; Robert M Brosh
Journal:  Biochem Soc Trans       Date:  2017-12-22       Impact factor: 5.407

5.  Dynamic Processing of Displacement Loops during Recombinational DNA Repair.

Authors:  Aurèle Piazza; Shanaya Shital Shah; William Douglass Wright; Steven K Gore; Romain Koszul; Wolf-Dietrich Heyer
Journal:  Mol Cell       Date:  2019-02-05       Impact factor: 17.970

Review 6.  Protein quality control in the nucleus.

Authors:  Ramon D Jones; Richard G Gardner
Journal:  Curr Opin Cell Biol       Date:  2016-03-22       Impact factor: 8.382

Review 7.  Slx4 scaffolding in homologous recombination and checkpoint control: lessons from yeast.

Authors:  José R Cussiol; Diego Dibitetto; Achille Pellicioli; Marcus B Smolka
Journal:  Chromosoma       Date:  2016-05-10       Impact factor: 4.316

Review 8.  Moving forward one step back at a time: reversibility during homologous recombination.

Authors:  Aurèle Piazza; Wolf-Dietrich Heyer
Journal:  Curr Genet       Date:  2019-05-23       Impact factor: 3.886

9.  Demystifying the D-loop during DNA recombination.

Authors:  Upasana Roy; Eric C Greene
Journal:  Nature       Date:  2020-10       Impact factor: 49.962

Review 10.  Main steps in DNA double-strand break repair: an introduction to homologous recombination and related processes.

Authors:  Lepakshi Ranjha; Sean M Howard; Petr Cejka
Journal:  Chromosoma       Date:  2018-01-11       Impact factor: 4.316

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