Literature DB >> 20511504

Complete genome sequence of probiotic Bifidobacterium animalis subsp. lactis strain V9.

Zhihong Sun1, Xia Chen, Jicheng Wang, Pengfei Gao, Zhemin Zhou, Yi Ren, Tiansong Sun, Lei Wang, He Meng, Wei Chen, Heping Zhang.   

Abstract

Bifidobacterium animalis subsp. lactis strain V9 is a Chinese commercial bifidobacteria with several probiotic functions. It was isolated from a healthy Mongolian child in China. We present here the complete genome sequence of V9 and compare it to 3 other published genome sequences of B. animalis subsp. lactis strains. The result indicates the lack of polymorphism among strains of this subspecies from different continents.

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Year:  2010        PMID: 20511504      PMCID: PMC2916379          DOI: 10.1128/JB.00369-10

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  8 in total

1.  Genome sequencing in microfabricated high-density picolitre reactors.

Authors:  Marcel Margulies; Michael Egholm; William E Altman; Said Attiya; Joel S Bader; Lisa A Bemben; Jan Berka; Michael S Braverman; Yi-Ju Chen; Zhoutao Chen; Scott B Dewell; Lei Du; Joseph M Fierro; Xavier V Gomes; Brian C Godwin; Wen He; Scott Helgesen; Chun Heen Ho; Chun He Ho; Gerard P Irzyk; Szilveszter C Jando; Maria L I Alenquer; Thomas P Jarvie; Kshama B Jirage; Jong-Bum Kim; James R Knight; Janna R Lanza; John H Leamon; Steven M Lefkowitz; Ming Lei; Jing Li; Kenton L Lohman; Hong Lu; Vinod B Makhijani; Keith E McDade; Michael P McKenna; Eugene W Myers; Elizabeth Nickerson; John R Nobile; Ramona Plant; Bernard P Puc; Michael T Ronan; George T Roth; Gary J Sarkis; Jan Fredrik Simons; John W Simpson; Maithreyan Srinivasan; Karrie R Tartaro; Alexander Tomasz; Kari A Vogt; Greg A Volkmer; Shally H Wang; Yong Wang; Michael P Weiner; Pengguang Yu; Richard F Begley; Jonathan M Rothberg
Journal:  Nature       Date:  2005-07-31       Impact factor: 49.962

2.  Genomic sequencing reveals regulatory mutations and recombinational events in the widely used MC4100 lineage of Escherichia coli K-12.

Authors:  Thomas Ferenci; Zhemin Zhou; Thu Betteridge; Yan Ren; Yu Liu; Lu Feng; Peter R Reeves; Lei Wang
Journal:  J Bacteriol       Date:  2009-04-17       Impact factor: 3.490

3.  [Screening and identification of probiotic bifidobacterium from Mongolian children].

Authors:  Pengfei Gao; Zhihong Sun; Shiwei Ma; Qiushi Wang; Jie Gao; Cengyuan Deng; Heping Zhang
Journal:  Wei Sheng Wu Xue Bao       Date:  2009-02

4.  Comparison of the complete genome sequences of Bifidobacterium animalis subsp. lactis DSM 10140 and Bl-04.

Authors:  Rodolphe Barrangou; Elizabeth P Briczinski; Lindsay L Traeger; Joseph R Loquasto; Melissa Richards; Philippe Horvath; Anne-Claire Coûté-Monvoisin; Gregory Leyer; Snjezana Rendulic; James L Steele; Jeffery R Broadbent; Taylor Oberg; Edward G Dudley; Stephan Schuster; Dennis A Romero; Robert F Roberts
Journal:  J Bacteriol       Date:  2009-04-17       Impact factor: 3.490

5.  Genome sequence of the probiotic bacterium Bifidobacterium animalis subsp. lactis AD011.

Authors:  Jihyun F Kim; Haeyoung Jeong; Dong Su Yu; Sang-Haeng Choi; Cheol-Goo Hur; Myeong-Soo Park; Sung Ho Yoon; Dae-Won Kim; Geun Eog Ji; Hong-Seog Park; Tae Kwang Oh
Journal:  J Bacteriol       Date:  2008-11-14       Impact factor: 3.490

6.  Fast and accurate short read alignment with Burrows-Wheeler transform.

Authors:  Heng Li; Richard Durbin
Journal:  Bioinformatics       Date:  2009-05-18       Impact factor: 6.937

7.  A recalibrated molecular clock and independent origins for the cholera pandemic clones.

Authors:  Lu Feng; Peter R Reeves; Ruiting Lan; Yi Ren; Chunxu Gao; Zhemin Zhou; Yan Ren; Jiansong Cheng; Wei Wang; Jianmei Wang; Wubin Qian; Dan Li; Lei Wang
Journal:  PLoS One       Date:  2008-12-30       Impact factor: 3.240

8.  Accurate whole human genome sequencing using reversible terminator chemistry.

Authors:  David R Bentley; Shankar Balasubramanian; Harold P Swerdlow; Geoffrey P Smith; John Milton; Clive G Brown; Kevin P Hall; Dirk J Evers; Colin L Barnes; Helen R Bignell; Jonathan M Boutell; Jason Bryant; Richard J Carter; R Keira Cheetham; Anthony J Cox; Darren J Ellis; Michael R Flatbush; Niall A Gormley; Sean J Humphray; Leslie J Irving; Mirian S Karbelashvili; Scott M Kirk; Heng Li; Xiaohai Liu; Klaus S Maisinger; Lisa J Murray; Bojan Obradovic; Tobias Ost; Michael L Parkinson; Mark R Pratt; Isabelle M J Rasolonjatovo; Mark T Reed; Roberto Rigatti; Chiara Rodighiero; Mark T Ross; Andrea Sabot; Subramanian V Sankar; Aylwyn Scally; Gary P Schroth; Mark E Smith; Vincent P Smith; Anastassia Spiridou; Peta E Torrance; Svilen S Tzonev; Eric H Vermaas; Klaudia Walter; Xiaolin Wu; Lu Zhang; Mohammed D Alam; Carole Anastasi; Ify C Aniebo; David M D Bailey; Iain R Bancarz; Saibal Banerjee; Selena G Barbour; Primo A Baybayan; Vincent A Benoit; Kevin F Benson; Claire Bevis; Phillip J Black; Asha Boodhun; Joe S Brennan; John A Bridgham; Rob C Brown; Andrew A Brown; Dale H Buermann; Abass A Bundu; James C Burrows; Nigel P Carter; Nestor Castillo; Maria Chiara E Catenazzi; Simon Chang; R Neil Cooley; Natasha R Crake; Olubunmi O Dada; Konstantinos D Diakoumakos; Belen Dominguez-Fernandez; David J Earnshaw; Ugonna C Egbujor; David W Elmore; Sergey S Etchin; Mark R Ewan; Milan Fedurco; Louise J Fraser; Karin V Fuentes Fajardo; W Scott Furey; David George; Kimberley J Gietzen; Colin P Goddard; George S Golda; Philip A Granieri; David E Green; David L Gustafson; Nancy F Hansen; Kevin Harnish; Christian D Haudenschild; Narinder I Heyer; Matthew M Hims; Johnny T Ho; Adrian M Horgan; Katya Hoschler; Steve Hurwitz; Denis V Ivanov; Maria Q Johnson; Terena James; T A Huw Jones; Gyoung-Dong Kang; Tzvetana H Kerelska; Alan D Kersey; Irina Khrebtukova; Alex P Kindwall; Zoya Kingsbury; Paula I Kokko-Gonzales; Anil Kumar; Marc A Laurent; Cynthia T Lawley; Sarah E Lee; Xavier Lee; Arnold K Liao; Jennifer A Loch; Mitch Lok; Shujun Luo; Radhika M Mammen; John W Martin; Patrick G McCauley; Paul McNitt; Parul Mehta; Keith W Moon; Joe W Mullens; Taksina Newington; Zemin Ning; Bee Ling Ng; Sonia M Novo; Michael J O'Neill; Mark A Osborne; Andrew Osnowski; Omead Ostadan; Lambros L Paraschos; Lea Pickering; Andrew C Pike; Alger C Pike; D Chris Pinkard; Daniel P Pliskin; Joe Podhasky; Victor J Quijano; Come Raczy; Vicki H Rae; Stephen R Rawlings; Ana Chiva Rodriguez; Phyllida M Roe; John Rogers; Maria C Rogert Bacigalupo; Nikolai Romanov; Anthony Romieu; Rithy K Roth; Natalie J Rourke; Silke T Ruediger; Eli Rusman; Raquel M Sanches-Kuiper; Martin R Schenker; Josefina M Seoane; Richard J Shaw; Mitch K Shiver; Steven W Short; Ning L Sizto; Johannes P Sluis; Melanie A Smith; Jean Ernest Sohna Sohna; Eric J Spence; Kim Stevens; Neil Sutton; Lukasz Szajkowski; Carolyn L Tregidgo; Gerardo Turcatti; Stephanie Vandevondele; Yuli Verhovsky; Selene M Virk; Suzanne Wakelin; Gregory C Walcott; Jingwen Wang; Graham J Worsley; Juying Yan; Ling Yau; Mike Zuerlein; Jane Rogers; James C Mullikin; Matthew E Hurles; Nick J McCooke; John S West; Frank L Oaks; Peter L Lundberg; David Klenerman; Richard Durbin; Anthony J Smith
Journal:  Nature       Date:  2008-11-06       Impact factor: 49.962

  8 in total
  11 in total

Review 1.  Phylogenetic framework and molecular signatures for the main clades of the phylum Actinobacteria.

Authors:  Beile Gao; Radhey S Gupta
Journal:  Microbiol Mol Biol Rev       Date:  2012-03       Impact factor: 11.056

2.  Selection of a Bifidobacterium animalis subsp. lactis strain with a decreased ability to produce acetic acid.

Authors:  Abelardo Margolles; Borja Sánchez
Journal:  Appl Environ Microbiol       Date:  2012-03-02       Impact factor: 4.792

3.  Bifidobacterium animalis subsp. lactis ATCC 27673 is a genomically unique strain within its conserved subspecies.

Authors:  Joseph R Loquasto; Rodolphe Barrangou; Edward G Dudley; Buffy Stahl; Chun Chen; Robert F Roberts
Journal:  Appl Environ Microbiol       Date:  2013-08-30       Impact factor: 4.792

4.  Genome sequence of the probiotic strain Bifidobacterium animalis subsp. lactis CNCM I-2494.

Authors:  Christian Chervaux; Christine Grimaldi; Alexander Bolotin; Benoit Quinquis; Sophie Legrain-Raspaud; Johan E T van Hylckama Vlieg; Gerard Denariaz; Tamara Smokvina
Journal:  J Bacteriol       Date:  2011-10       Impact factor: 3.490

5.  Complete genome sequences of probiotic strains Bifidobacterium animalis subsp. lactis B420 and Bi-07.

Authors:  Buffy Stahl; Rodolphe Barrangou
Journal:  J Bacteriol       Date:  2012-08       Impact factor: 3.490

6.  Complete genome sequence of Bifidobacterium animalis subsp. lactis BLC1.

Authors:  Francesca Bottacini; Fabio Dal Bello; Francesca Turroni; Christian Milani; Sabrina Duranti; Elena Foroni; Alice Viappiani; Francesco Strati; Diego Mora; Douwe van Sinderen; Marco Ventura
Journal:  J Bacteriol       Date:  2011-11       Impact factor: 3.490

7.  Transcription analysis of a lantibiotic gene cluster from Bifidobacterium longum DJO10A.

Authors:  Ju-Hoon Lee; Xiulan Li; Daniel J O'Sullivan
Journal:  Appl Environ Microbiol       Date:  2011-07-08       Impact factor: 4.792

8.  Comparative genomics of Bifidobacterium animalis subsp. lactis reveals a strict monophyletic bifidobacterial taxon.

Authors:  Christian Milani; Sabrina Duranti; Gabriele Andrea Lugli; Francesca Bottacini; Francesco Strati; Stefania Arioli; Elena Foroni; Francesca Turroni; Douwe van Sinderen; Marco Ventura
Journal:  Appl Environ Microbiol       Date:  2013-05-03       Impact factor: 4.792

9.  Oral Administration of Compound Probiotics Improved Canine Feed Intake, Weight Gain, Immunity and Intestinal Microbiota.

Authors:  Haiyan Xu; Weiqiang Huang; Qiangchuan Hou; Lai-Yu Kwok; Wuri Laga; Yanjie Wang; Huimin Ma; Zhihong Sun; Heping Zhang
Journal:  Front Immunol       Date:  2019-04-02       Impact factor: 7.561

10.  Modulation of gut mucosal microbiota as a mechanism of probiotics-based adjunctive therapy for ulcerative colitis.

Authors:  Ping Chen; Haiyan Xu; Hai Tang; Feiyan Zhao; Chengcong Yang; Lai-Yu Kwok; Chunli Cong; YanFang Wu; Wenyi Zhang; XiaoFeng Zhou; Heping Zhang
Journal:  Microb Biotechnol       Date:  2020-09-23       Impact factor: 5.813

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