Literature DB >> 22815448

Complete genome sequences of probiotic strains Bifidobacterium animalis subsp. lactis B420 and Bi-07.

Buffy Stahl1, Rodolphe Barrangou.   

Abstract

We present the complete genomes of Bifidobacterium animalis subsp. lactis B420 and Bi-07. Comparative genomic analysis with the type strain DSMZ10140 revealed 40 to 55 single nucleotide polymorphisms (SNPs) and an indel in a clustered regularly interspaced short palindromic repeat (CRISPR) locus. These genetic differences provide a molecular basis for strain typing within the two main phylogenetic groups of this monomorphic species.

Entities:  

Mesh：

Substances：

Year:  2012        PMID： 22815448      PMCID： PMC3416519          DOI： 10.1128/JB.00766-12

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


  16 in total

1.  Genome sequencing in microfabricated high-density picolitre reactors.

Authors:  Marcel Margulies; Michael Egholm; William E Altman; Said Attiya; Joel S Bader; Lisa A Bemben; Jan Berka; Michael S Braverman; Yi-Ju Chen; Zhoutao Chen; Scott B Dewell; Lei Du; Joseph M Fierro; Xavier V Gomes; Brian C Godwin; Wen He; Scott Helgesen; Chun Heen Ho; Chun He Ho; Gerard P Irzyk; Szilveszter C Jando; Maria L I Alenquer; Thomas P Jarvie; Kshama B Jirage; Jong-Bum Kim; James R Knight; Janna R Lanza; John H Leamon; Steven M Lefkowitz; Ming Lei; Jing Li; Kenton L Lohman; Hong Lu; Vinod B Makhijani; Keith E McDade; Michael P McKenna; Eugene W Myers; Elizabeth Nickerson; John R Nobile; Ramona Plant; Bernard P Puc; Michael T Ronan; George T Roth; Gary J Sarkis; Jan Fredrik Simons; John W Simpson; Maithreyan Srinivasan; Karrie R Tartaro; Alexander Tomasz; Kari A Vogt; Greg A Volkmer; Shally H Wang; Yong Wang; Michael P Weiner; Pengguang Yu; Richard F Begley; Jonathan M Rothberg
Journal:  Nature       Date:  2005-07-31       Impact factor: 49.962

2.  Complete genome sequence of Bifidobacterium animalis subsp. lactis BB-12, a widely consumed probiotic strain.

Authors:  Christel Garrigues; Eric Johansen; Martin B Pedersen
Journal:  J Bacteriol       Date:  2010-02-26       Impact factor: 3.490

3.  Genetic basis of tetracycline resistance in Bifidobacterium animalis subsp. lactis.

Authors:  Miguel Gueimonde; Ana Belén Flórez; Angela H A M van Hoek; Birgitte Stuer-Lauridsen; Per Strøman; Clara G de los Reyes-Gavilán; Abelardo Margolles
Journal:  Appl Environ Microbiol       Date:  2010-03-26       Impact factor: 4.792

4.  The effect of probiotics on faecal microbiota and genotoxic activity of faecal water in patients with atopic dermatitis: a randomized, placebo-controlled study.

Authors:  A Roessler; S D Forssten; M Glei; A C Ouwehand; G Jahreis
Journal:  Clin Nutr       Date:  2011-10-02       Impact factor: 7.324

5.  Comparison of the complete genome sequences of Bifidobacterium animalis subsp. lactis DSM 10140 and Bl-04.

Authors:  Rodolphe Barrangou; Elizabeth P Briczinski; Lindsay L Traeger; Joseph R Loquasto; Melissa Richards; Philippe Horvath; Anne-Claire Coûté-Monvoisin; Gregory Leyer; Snjezana Rendulic; James L Steele; Jeffery R Broadbent; Taylor Oberg; Edward G Dudley; Stephan Schuster; Dennis A Romero; Robert F Roberts
Journal:  J Bacteriol       Date:  2009-04-17       Impact factor: 3.490

6.  Analysis of tetracycline resistance tet(W) genes and their flanking sequences in intestinal Bifidobacterium species.

Authors:  Mohammed Salim Ammor; Ana Belén Flórez; Pablo Alvarez-Martín; Abelardo Margolles; Baltasar Mayo
Journal:  J Antimicrob Chemother       Date:  2008-07-08       Impact factor: 5.790

7.  Probiotic effects on cold and influenza-like symptom incidence and duration in children.

Authors:  Gregory J Leyer; Shuguang Li; Mohamed E Mubasher; Cheryl Reifer; Arthur C Ouwehand
Journal:  Pediatrics       Date:  2009-07-27       Impact factor: 7.124

8.  Genome sequence of the probiotic bacterium Bifidobacterium animalis subsp. lactis AD011.

Authors:  Jihyun F Kim; Haeyoung Jeong; Dong Su Yu; Sang-Haeng Choi; Cheol-Goo Hur; Myeong-Soo Park; Sung Ho Yoon; Dae-Won Kim; Geun Eog Ji; Hong-Seog Park; Tae Kwang Oh
Journal:  J Bacteriol       Date:  2008-11-14       Impact factor: 3.490

9.  Strain-specific genotyping of Bifidobacterium animalis subsp. lactis by using single-nucleotide polymorphisms, insertions, and deletions.

Authors:  Elizabeth P Briczinski; Joseph R Loquasto; Rodolphe Barrangou; Edward G Dudley; Anastasia M Roberts; Robert F Roberts
Journal:  Appl Environ Microbiol       Date:  2009-10-02       Impact factor: 4.792

10.  The RAST Server: rapid annotations using subsystems technology.

Authors:  Ramy K Aziz; Daniela Bartels; Aaron A Best; Matthew DeJongh; Terrence Disz; Robert A Edwards; Kevin Formsma; Svetlana Gerdes; Elizabeth M Glass; Michael Kubal; Folker Meyer; Gary J Olsen; Robert Olson; Andrei L Osterman; Ross A Overbeek; Leslie K McNeil; Daniel Paarmann; Tobias Paczian; Bruce Parrello; Gordon D Pusch; Claudia Reich; Rick Stevens; Olga Vassieva; Veronika Vonstein; Andreas Wilke; Olga Zagnitko
Journal:  BMC Genomics       Date:  2008-02-08       Impact factor: 3.969
View more
  9 in total

1.  Bifidobacterium animalis subsp. lactis ATCC 27673 is a genomically unique strain within its conserved subspecies.

Authors:  Joseph R Loquasto; Rodolphe Barrangou; Edward G Dudley; Buffy Stahl; Chun Chen; Robert F Roberts
Journal:  Appl Environ Microbiol       Date:  2013-08-30       Impact factor: 4.792

2.  An adaptable and non-invasive method for tracking Bifidobacterium animalis subspecies lactis 420 in the mouse gut.

Authors:  Marissa A Lopez-Pier; Matthew P Koppinger; Preston R Harris; Danielle K Cannon; Rinku S Skaria; Bonnie L Hurwitz; George Watts; Shravan Aras; Marvin J Slepian; John P Konhilas
Journal:  J Microbiol Methods       Date:  2021-08-13       Impact factor: 2.622

3.  The Probiotic Strain Bifidobacterium animalis ssp. lactis HY8002 Potentially Improves the Mucosal Integrity of an Altered Intestinal Microbial Environment.

Authors:  Joo Yun Kim; So-Jung Bang; Ju-Yeon Kim; Eun Jung Choi; Keon Heo; Jae-Jung Shim; Jung-Lyoul Lee
Journal:  Front Microbiol       Date:  2022-04-29       Impact factor: 6.064

4.  Dissecting the Evolutionary Development of the Species Bifidobacterium animalis through Comparative Genomics Analyses.

Authors:  Gabriele Andrea Lugli; Walter Mancino; Christian Milani; Sabrina Duranti; Leonardo Mancabelli; Stefania Napoli; Marta Mangifesta; Alice Viappiani; Rosaria Anzalone; Giulia Longhi; Douwe van Sinderen; Marco Ventura; Francesca Turroni
Journal:  Appl Environ Microbiol       Date:  2019-03-22       Impact factor: 4.792

5.  Comparative genomics of Bifidobacterium animalis subsp. lactis reveals a strict monophyletic bifidobacterial taxon.

Authors:  Christian Milani; Sabrina Duranti; Gabriele Andrea Lugli; Francesca Bottacini; Francesco Strati; Stefania Arioli; Elena Foroni; Francesca Turroni; Douwe van Sinderen; Marco Ventura
Journal:  Appl Environ Microbiol       Date:  2013-05-03       Impact factor: 4.792

6.  Whole-genome analysis of probiotic product isolates reveals the presence of genes related to antimicrobial resistance, virulence factors, and toxic metabolites, posing potential health risks.

Authors:  Ying Wang; Qian Liang; Bian Lu; Hong Shen; Shuyan Liu; Ya Shi; Sebastian Leptihn; Hong Li; Jin Wei; Chengzhi Liu; Hailong Xiao; Xiaoling Zheng; Chao Liu; Huan Chen
Journal:  BMC Genomics       Date:  2021-03-24       Impact factor: 3.969

7.  Locked Nucleic Acid Hydrolysis Probes for the Specific Identification of Probiotic Strains Bifidobacterium animalis subsp. lactis DSM 15954 and Bi-07™.

Authors:  Hanan R Shehata; Anthony Kiefer; Wesley Morovic; Steven G Newmaster
Journal:  Front Microbiol       Date:  2021-12-23       Impact factor: 5.640

8.  Exploration of Survival Traits, Probiotic Determinants, Host Interactions, and Functional Evolution of Bifidobacterial Genomes Using Comparative Genomics.

Authors:  Vikas Sharma; Fauzul Mobeen; Tulika Prakash
Journal:  Genes (Basel)       Date:  2018-10-01       Impact factor: 4.096

Review 9.  Bifidobacterium animalis subsp. lactis 420 for Metabolic Health: Review of the Research.

Authors:  Henna-Maria Uusitupa; Pia Rasinkangas; Markus J Lehtinen; Sanna M Mäkelä; Kaisa Airaksinen; Heli Anglenius; Arthur C Ouwehand; Johanna Maukonen
Journal:  Nutrients       Date:  2020-03-25       Impact factor: 5.717
  9 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.