Literature DB >> 21914878

Genome sequence of the probiotic strain Bifidobacterium animalis subsp. lactis CNCM I-2494.

Christian Chervaux1, Christine Grimaldi, Alexander Bolotin, Benoit Quinquis, Sophie Legrain-Raspaud, Johan E T van Hylckama Vlieg, Gerard Denariaz, Tamara Smokvina.   

Abstract

Bifidobacterium animalis subsp. lactis CNCM I-2494 is part of a commercialized fermented dairy product with documented health benefits revealed by multiple randomized placebo-controlled clinical trials. Here we report the complete genome sequence of this strain, which has a circular genome of 1,943,113 bp with 1,660 open reading frames and 4 ribosomal operons.

Entities:  

Mesh：

Year:  2011        PMID： 21914878      PMCID： PMC3187456          DOI： 10.1128/JB.05716-11

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


  13 in total

1.  Bifidobacterium animalis subsp. lactis fermented milk product reduces inflammation by altering a niche for colitogenic microbes.

Authors:  Patrick Veiga; Carey Ann Gallini; Chloé Beal; Monia Michaud; Mary L Delaney; Andrea DuBois; Artem Khlebnikov; Johan E T van Hylckama Vlieg; Shivesh Punit; Jonathan N Glickman; Andrew Onderdonk; Laurie H Glimcher; Wendy S Garrett
Journal:  Proc Natl Acad Sci U S A       Date:  2010-10-04       Impact factor: 11.205

2.  The ERGO genome analysis and discovery system.

Authors:  Ross Overbeek; Niels Larsen; Theresa Walunas; Mark D'Souza; Gordon Pusch; Eugene Selkov; Konstantinos Liolios; Viktor Joukov; Denis Kaznadzey; Iain Anderson; Anamitra Bhattacharyya; Henry Burd; Warren Gardner; Paul Hanke; Vinayak Kapatral; Natalia Mikhailova; Olga Vasieva; Andrei Osterman; Veronika Vonstein; Michael Fonstein; Natalia Ivanova; Nikos Kyrpides
Journal:  Nucleic Acids Res       Date:  2003-01-01       Impact factor: 16.971

3.  Complete genome sequence of probiotic Bifidobacterium animalis subsp. lactis strain V9.

Authors:  Zhihong Sun; Xia Chen; Jicheng Wang; Pengfei Gao; Zhemin Zhou; Yi Ren; Tiansong Sun; Lei Wang; He Meng; Wei Chen; Heping Zhang
Journal:  J Bacteriol       Date:  2010-05-28       Impact factor: 3.490

4.  PSORTb v.2.0: expanded prediction of bacterial protein subcellular localization and insights gained from comparative proteome analysis.

Authors:  J L Gardy; M R Laird; F Chen; S Rey; C J Walsh; M Ester; F S L Brinkman
Journal:  Bioinformatics       Date:  2004-10-22       Impact factor: 6.937

5.  Clinical trial: the effects of a fermented milk product containing Bifidobacterium lactis DN-173 010 on abdominal distension and gastrointestinal transit in irritable bowel syndrome with constipation.

Authors:  A Agrawal; L A Houghton; J Morris; B Reilly; D Guyonnet; N Goupil Feuillerat; A Schlumberger; S Jakob; P J Whorwell
Journal:  Aliment Pharmacol Ther       Date:  2008-09-17       Impact factor: 8.171

6.  Complete genome sequence of Bifidobacterium animalis subsp. lactis BB-12, a widely consumed probiotic strain.

Authors:  Christel Garrigues; Eric Johansen; Martin B Pedersen
Journal:  J Bacteriol       Date:  2010-02-26       Impact factor: 3.490

7.  Isolation and characterization of a collagen binding domain in human von Willebrand factor.

Authors:  F I Pareti; Y Fujimura; J A Dent; L Z Holland; T S Zimmerman; Z M Ruggeri
Journal:  J Biol Chem       Date:  1986-11-15       Impact factor: 5.157

8.  Fermented milk containing Bifidobacterium lactis DN-173 010 improves gastrointestinal well-being and digestive symptoms in women reporting minor digestive symptoms: a randomised, double-blind, parallel, controlled study.

Authors:  Denis Guyonnet; Armelle Schlumberger; Leila Mhamdi; Stefan Jakob; Olivier Chassany
Journal:  Br J Nutr       Date:  2009-07-22       Impact factor: 3.718

Review 9.  Human gut microbiota and bifidobacteria: from composition to functionality.

Authors:  Francesca Turroni; Angela Ribbera; Elena Foroni; Douwe van Sinderen; Marco Ventura
Journal:  Antonie Van Leeuwenhoek       Date:  2008-03-13       Impact factor: 2.271

10.  Species delineation and clonal diversity in four Bifidobacterium species as revealed by multilocus sequencing.

Authors:  Alexis Delétoile; Virginie Passet; Julio Aires; Isabelle Chambaud; Marie-José Butel; Tamara Smokvina; Sylvain Brisse
Journal:  Res Microbiol       Date:  2010-01-11       Impact factor: 3.992
View more
  12 in total

1.  Selection of a Bifidobacterium animalis subsp. lactis strain with a decreased ability to produce acetic acid.

Authors:  Abelardo Margolles; Borja Sánchez
Journal:  Appl Environ Microbiol       Date:  2012-03-02       Impact factor: 4.792

2.  Bifidobacterium animalis subsp. lactis ATCC 27673 is a genomically unique strain within its conserved subspecies.

Authors:  Joseph R Loquasto; Rodolphe Barrangou; Edward G Dudley; Buffy Stahl; Chun Chen; Robert F Roberts
Journal:  Appl Environ Microbiol       Date:  2013-08-30       Impact factor: 4.792

3.  Complete genome sequences of probiotic strains Bifidobacterium animalis subsp. lactis B420 and Bi-07.

Authors:  Buffy Stahl; Rodolphe Barrangou
Journal:  J Bacteriol       Date:  2012-08       Impact factor: 3.490

4.  Identification and assembly of genomes and genetic elements in complex metagenomic samples without using reference genomes.

Authors:  H Bjørn Nielsen; Mathieu Almeida; Agnieszka Sierakowska Juncker; Simon Rasmussen; Junhua Li; Shinichi Sunagawa; Damian R Plichta; Laurent Gautier; Anders G Pedersen; Emmanuelle Le Chatelier; Eric Pelletier; Ida Bonde; Trine Nielsen; Chaysavanh Manichanh; Manimozhiyan Arumugam; Jean-Michel Batto; Marcelo B Quintanilha Dos Santos; Nikolaj Blom; Natalia Borruel; Kristoffer S Burgdorf; Fouad Boumezbeur; Francesc Casellas; Joël Doré; Piotr Dworzynski; Francisco Guarner; Torben Hansen; Falk Hildebrand; Rolf S Kaas; Sean Kennedy; Karsten Kristiansen; Jens Roat Kultima; Pierre Léonard; Florence Levenez; Ole Lund; Bouziane Moumen; Denis Le Paslier; Nicolas Pons; Oluf Pedersen; Edi Prifti; Junjie Qin; Jeroen Raes; Søren Sørensen; Julien Tap; Sebastian Tims; David W Ussery; Takuji Yamada; Pierre Renault; Thomas Sicheritz-Ponten; Peer Bork; Jun Wang; Søren Brunak; S Dusko Ehrlich
Journal:  Nat Biotechnol       Date:  2014-07-06       Impact factor: 54.908

5.  Dissecting the Evolutionary Development of the Species Bifidobacterium animalis through Comparative Genomics Analyses.

Authors:  Gabriele Andrea Lugli; Walter Mancino; Christian Milani; Sabrina Duranti; Leonardo Mancabelli; Stefania Napoli; Marta Mangifesta; Alice Viappiani; Rosaria Anzalone; Giulia Longhi; Douwe van Sinderen; Marco Ventura; Francesca Turroni
Journal:  Appl Environ Microbiol       Date:  2019-03-22       Impact factor: 4.792

6.  Comparative genomics of Bifidobacterium animalis subsp. lactis reveals a strict monophyletic bifidobacterial taxon.

Authors:  Christian Milani; Sabrina Duranti; Gabriele Andrea Lugli; Francesca Bottacini; Francesco Strati; Stefania Arioli; Elena Foroni; Francesca Turroni; Douwe van Sinderen; Marco Ventura
Journal:  Appl Environ Microbiol       Date:  2013-05-03       Impact factor: 4.792

7.  Identification of restriction-modification systems of Bifidobacterium animalis subsp. lactis CNCM I-2494 by SMRT sequencing and associated methylome analysis.

Authors:  Mary O' Connell Motherway; Debbie Watson; Francesca Bottacini; Tyson A Clark; Richard J Roberts; Jonas Korlach; Peggy Garault; Christian Chervaux; Johan E T van Hylckama Vlieg; Tamara Smokvina; Douwe van Sinderen
Journal:  PLoS One       Date:  2014-04-17       Impact factor: 3.240

8.  Changes of the human gut microbiome induced by a fermented milk product.

Authors:  Patrick Veiga; Nicolas Pons; Anurag Agrawal; Raish Oozeer; Denis Guyonnet; Rémi Brazeilles; Jean-Michel Faurie; Johan E T van Hylckama Vlieg; Lesley A Houghton; Peter J Whorwell; S Dusko Ehrlich; Sean P Kennedy
Journal:  Sci Rep       Date:  2014-09-11       Impact factor: 4.379

9.  Bifidobacterium animalis ssp. lactis CNCM-I2494 Restores Gut Barrier Permeability in Chronically Low-Grade Inflamed Mice.

Authors:  Rebeca Martín; Laure Laval; Florian Chain; Sylvie Miquel; Jane Natividad; Claire Cherbuy; Harry Sokol; Elena F Verdu; Johan van Hylckama Vlieg; Luis G Bermudez-Humaran; Tamara Smokvina; Philippe Langella
Journal:  Front Microbiol       Date:  2016-05-06       Impact factor: 5.640

10.  Exploration of Survival Traits, Probiotic Determinants, Host Interactions, and Functional Evolution of Bifidobacterial Genomes Using Comparative Genomics.

Authors:  Vikas Sharma; Fauzul Mobeen; Tulika Prakash
Journal:  Genes (Basel)       Date:  2018-10-01       Impact factor: 4.096
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.