Literature DB >> 2038341

Template-directed primer extension catalyzed by the Tetrahymena ribozyme.

D P Bartel1, J A Doudna, N Usman, J W Szostak.   

Abstract

The Tetrahymena ribozyme has been shown to catalyze an RNA polymerase-like reaction in which an RNA primer is extended by the sequential addition of pN nucleotides derived from GpN dinucleotides, where N = A, C, or U. Here, we show that this reaction is influenced by the presence of a template; bases that can form Watson-Crick base pairs with a template add as much as 25-fold more efficiently than mismatched bases. A mutant enzyme with an altered guanosine binding site can catalyze template-directed primer extension with all four bases when supplied with dinucleotides of the form 2-aminopurine-pN.

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Year:  1991        PMID: 2038341      PMCID: PMC360195          DOI: 10.1128/mcb.11.6.3390-3394.1991

Source DB:  PubMed          Journal:  Mol Cell Biol        ISSN: 0270-7306            Impact factor:   4.272


  24 in total

1.  Chemical synthesis of oligoribonucleotides containing 2-aminopurine: substrates for the investigation of ribozyme function.

Authors:  J A Doudna; J W Szostak; A Rich; N Usman
Journal:  J Org Chem       Date:  1990-10-12       Impact factor: 4.354

2.  STUDIES OF THE RIBONUCLEIC ACID POLYMERASE FROM ESCHERICHIA COLI. IV. EFFECT OF OLIGONUCLEOTIDES ON THE RIBONUCLEIC ACID POLYMERASE REACTION WITH SYNTHETIC POLYRIBONUCLEOTIDES AS TEMPLATES.

Authors:  S K NIYOGI; A STEVENS
Journal:  J Biol Chem       Date:  1965-06       Impact factor: 5.157

3.  RNA-catalysed synthesis of complementary-strand RNA.

Authors:  J A Doudna; J W Szostak
Journal:  Nature       Date:  1989-06-15       Impact factor: 49.962

4.  The guanosine binding site of the Tetrahymena ribozyme.

Authors:  F Michel; M Hanna; R Green; D P Bartel; J W Szostak
Journal:  Nature       Date:  1989-11-23       Impact factor: 49.962

Review 5.  RNA structure prediction.

Authors:  D H Turner; N Sugimoto; S M Freier
Journal:  Annu Rev Biophys Biophys Chem       Date:  1988

6.  Modern metabolism as a palimpsest of the RNA world.

Authors:  S A Benner; A D Ellington; A Tauer
Journal:  Proc Natl Acad Sci U S A       Date:  1989-09       Impact factor: 11.205

7.  RNA evolution and the origins of life.

Authors:  G F Joyce
Journal:  Nature       Date:  1989-03-16       Impact factor: 49.962

8.  Processivity in early stages of transcription by T7 RNA polymerase.

Authors:  C T Martin; D K Muller; J E Coleman
Journal:  Biochemistry       Date:  1988-05-31       Impact factor: 3.162

9.  Specific synthesis of DNA in vitro via a polymerase-catalyzed chain reaction.

Authors:  K B Mullis; F A Faloona
Journal:  Methods Enzymol       Date:  1987       Impact factor: 1.600

10.  RNA as an RNA polymerase: net elongation of an RNA primer catalyzed by the Tetrahymena ribozyme.

Authors:  M D Been; T R Cech
Journal:  Science       Date:  1988-03-18       Impact factor: 47.728

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  12 in total

1.  The fidelity of template-directed oligonucleotide ligation and the inevitability of polymerase function.

Authors:  K D James; A D Ellington
Journal:  Orig Life Evol Biosph       Date:  1999-08       Impact factor: 1.950

2.  Templating efficiency of naked DNA.

Authors:  Eric Kervio; Annette Hochgesand; Ulrich E Steiner; Clemens Richert
Journal:  Proc Natl Acad Sci U S A       Date:  2010-06-16       Impact factor: 11.205

3.  New ligase-derived RNA polymerase ribozymes.

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4.  Selection of an improved RNA polymerase ribozyme with superior extension and fidelity.

Authors:  Hani S Zaher; Peter J Unrau
Journal:  RNA       Date:  2007-07       Impact factor: 4.942

5.  Characterization of the B6.61 polymerase ribozyme accessory domain.

Authors:  Qing S Wang; Leslie K L Cheng; Peter J Unrau
Journal:  RNA       Date:  2011-01-11       Impact factor: 4.942

6.  DNA polymerization catalysed by a group II intron RNA in vitro.

Authors:  M Hetzer; R J Schweyen; M W Mueller
Journal:  Nucleic Acids Res       Date:  1997-05-01       Impact factor: 16.971

7.  Novel system for analysis of group I 3' splice site reactions based on functional trans-interaction of the P1/P10 reaction helix with the ribozyme's catalytic core.

Authors:  B M Chowrira; A Berzal-Herranz; J M Burke
Journal:  Nucleic Acids Res       Date:  1995-03-11       Impact factor: 16.971

8.  The antibiotic viomycin as a model peptide for the origin of the co-evolution of RNA and proteins.

Authors:  H Wank; E Clodi; M G Wallis; R Schroeder
Journal:  Orig Life Evol Biosph       Date:  1999-08       Impact factor: 1.950

9.  Tailoring RNA modular units on a common scaffold: a modular ribozyme with a catalytic unit for beta-nicotinamide mononucleotide-activated RNA ligation.

Authors:  Yuki Fujita; Hiroyuki Furuta; Yoshiya Ikawa
Journal:  RNA       Date:  2009-03-23       Impact factor: 4.942

10.  Helicase-like functions in phosphate loop containing beta-alpha polypeptides.

Authors:  Pratik Vyas; Olena Trofimyuk; Liam M Longo; Fanindra Kumar Deshmukh; Michal Sharon; Dan S Tawfik
Journal:  Proc Natl Acad Sci U S A       Date:  2021-04-20       Impact factor: 11.205

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