Literature DB >> 20383027

Efficient UV detection of protein crystals enabled by fluorescence excitation at wavelengths longer than 300 nm.

Karsten Dierks1, Arne Meyer, Dominik Oberthür, Gert Rapp, Howard Einspahr, Christian Betzel.   

Abstract

It is well known that most proteins and many other biomolecules fluoresce when illuminated with UV radiation, but it is also commonly accepted that utilizing this property to detect protein crystals in crystallization setups is limited by the opacity of the materials used to contain and seal them. For proteins, this fluorescence property arises primarily from the presence of tryptophan residues in the sequence. Studies of protein crystallization results in a variety of setup configurations show that the opacity of the containment hardware can be overcome at longer excitation wavelengths, where typical hardware materials are more transparent in the UV, by the use of a powerful UV-light source that is effective in excitation even though not at the maximum of the excitation response. The results show that under these circumstances UV evaluation of crystallization trials and detection of biomolecular crystals in them is not limited by the hardware used. It is similarly true that a deficiency in tryptophan or another fluorescent component that limits the use of UV light for these purposes can be effectively overcome by the addition of fluorescent prostheses that bind to the biomolecule under study. The measurements for these studies were made with a device consisting of a potent UV-light source and a detection system specially adapted (i) to be tunable via a motorized and software-controlled absorption-filter system and (ii) to convey the excitation light to the droplet or capillary hosting the crystallization experiment by quartz-fibre light guides.

Entities:  

Mesh:

Substances:

Year:  2010        PMID: 20383027      PMCID: PMC2852349          DOI: 10.1107/S1744309110007153

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  13 in total

Review 1.  High-throughput protein crystallization.

Authors:  R C Stevens
Journal:  Curr Opin Struct Biol       Date:  2000-10       Impact factor: 6.809

2.  Protein crystallization for genomics: towards high-throughput optimization techniques.

Authors:  Naomi E Chayen; Emmanuel Saridakis
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2002-05-29

Review 3.  High-throughput protein crystallization.

Authors:  Raymond Hui; Aled Edwards
Journal:  J Struct Biol       Date:  2003-04       Impact factor: 2.867

Review 4.  High-throughput crystallography for lead discovery in drug design.

Authors:  Tom L Blundell; Harren Jhoti; Chris Abell
Journal:  Nat Rev Drug Discov       Date:  2002-01       Impact factor: 84.694

5.  Assessing crystallization droplets using birefringence.

Authors:  A Echalier; R L Glazer; V Fülöp; M A Geday
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2004-03-23

6.  An ultraviolet fluorescence-based method for identifying and distinguishing protein crystals.

Authors:  Russell A Judge; Kerry Swift; Carlos González
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2004-12-17

7.  Fluorescence detection of nucleic acids and proteins in multi-component crystals.

Authors:  Hubert Kettenberger; Patrick Cramer
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2006-01-18

8.  Neurotransmitter imaging in living cells based on native fluorescence detection.

Authors:  W Tan; V Parpura; P G Haydon; E S Yeung
Journal:  Anal Chem       Date:  1995-08-01       Impact factor: 6.986

9.  Evaluating the efficacy of tryptophan fluorescence and absorbance as a selection tool for identifying protein crystals.

Authors:  Harindarpal S Gill
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2010-02-27

10.  Sequence-specific cleavage of small-subunit (SSU) rRNA with oligonucleotides and RNase H: a rapid and simple approach to SSU rRNA-based quantitative detection of microorganisms.

Authors:  Yutaka Uyeno; Yuji Sekiguchi; Akiko Sunaga; Hiroki Yoshida; Yoichi Kamagata
Journal:  Appl Environ Microbiol       Date:  2004-06       Impact factor: 4.792

View more
  17 in total

1.  Trial by fire: are the crystals macromolecules?

Authors:  Kannan Raghunathan; Paul T Harris; Dennis N Arvidson
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2010-04-29

2.  Characterization of salt interferences in second-harmonic generation detection of protein crystals.

Authors:  R G Closser; E J Gualtieri; J A Newman; G J Simpson
Journal:  J Appl Crystallogr       Date:  2013-11-15       Impact factor: 3.304

3.  Two-photon excited UV fluorescence for protein crystal detection.

Authors:  Jeremy T Madden; Emma L DeWalt; Garth J Simpson
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2011-09-08

4.  Approaches to automated protein crystal harvesting.

Authors:  Marc C Deller; Bernhard Rupp
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2014-01-28       Impact factor: 1.056

5.  Recombinant production, purification and crystallization of the Toxoplasma gondii coronin WD40 domain.

Authors:  Juha Pekka Kallio; Inari Kursula
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2014-03-25       Impact factor: 1.056

6.  Automation in biological crystallization.

Authors:  Patrick Shaw Stewart; Jochen Mueller-Dieckmann
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2014-05-28       Impact factor: 1.056

Review 7.  Introduction to protein crystallization.

Authors:  Alexander McPherson; Jose A Gavira
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2013-12-24       Impact factor: 1.056

8.  Imaging of protein crystals with two-photon microscopy.

Authors:  Pius Padayatti; Grazyna Palczewska; Wenyu Sun; Krzysztof Palczewski; David Salom
Journal:  Biochemistry       Date:  2012-02-16       Impact factor: 3.162

9.  Improved protein-crystal identification by using 2,2,2-trichloroethanol as a fluorescence enhancer.

Authors:  Christian Pichlo; Christine Toelzer; Konrad Chojnacki; Sinan Öcal; Matthias Uthoff; Sabine Ruegenberg; Thomas Hermanns; Magdalena Schacherl; Martin S Denzel; Kay Hofmann; Karsten Niefind; Ulrich Baumann
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2018-04-24       Impact factor: 1.056

10.  Some practical guidelines for UV imaging in the protein crystallization laboratory.

Authors:  Sebastien Desbois; Shane A Seabrook; Janet Newman
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2013-01-26
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.