Literature DB >> 29717999

Improved protein-crystal identification by using 2,2,2-trichloroethanol as a fluorescence enhancer.

Christian Pichlo1, Christine Toelzer1, Konrad Chojnacki1, Sinan Öcal1, Matthias Uthoff1, Sabine Ruegenberg2, Thomas Hermanns3, Magdalena Schacherl4, Martin S Denzel2, Kay Hofmann3, Karsten Niefind1, Ulrich Baumann1.   

Abstract

The identification of initial lead conditions for successful protein crystallization is crucial for structural studies using X-ray crystallography. In order to reduce the number of false-negative conditions, an emerging number of fluorescence-based methods have been developed which allow more efficient identification of protein crystals and help to distinguish them from salt crystals. Detection of the native tryptophan fluorescence of protein crystals is one of the most widely used methods. However, this method can fail owing to the properties of the crystallized protein or the chemical composition of the crystallization trials. Here, a simple, fast and cost-efficient method employing 2,2,2-trichloroethanol (TCE) has been developed. It can be performed with a standard UV-light microscope and can be applied to cases in which detection of native tryptophan fluorescence fails. In four test cases this method had no effect on the diffraction properties of the crystals and no structural changes were observed. Further evidence is provided that TCE can be added to crystallization trials during their preparation, making this method compatible with high-throughput approaches.

Entities:  

Keywords:  2,2,2-trichloroethanol; PPEP-1; protein-crystal identification; tryptophan fluorescence

Mesh:

Substances:

Year:  2018        PMID: 29717999      PMCID: PMC5931144          DOI: 10.1107/S2053230X18005253

Source DB:  PubMed          Journal:  Acta Crystallogr F Struct Biol Commun        ISSN: 2053-230X            Impact factor:   1.056


  22 in total

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Authors:  Nigel W Moriarty; Ralf W Grosse-Kunstleve; Paul D Adams
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5.  Evaluating the efficacy of tryptophan fluorescence and absorbance as a selection tool for identifying protein crystals.

Authors:  Harindarpal S Gill
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2010-02-27

6.  The light-induced reactions of tryptophan with halocompounds.

Authors:  Robert A Edwards; Glen Jickling; Raymond J Turner
Journal:  Photochem Photobiol       Date:  2002-04       Impact factor: 3.421

7.  Molecular basis for the action of the collagen-specific chaperone Hsp47/SERPINH1 and its structure-specific client recognition.

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8.  Visible fluorescent detection of proteins in polyacrylamide gels without staining.

Authors:  Carol L Ladner; Jing Yang; Raymond J Turner; Robert A Edwards
Journal:  Anal Biochem       Date:  2004-03-01       Impact factor: 3.365

9.  Towards automated crystallographic structure refinement with phenix.refine.

Authors:  Pavel V Afonine; Ralf W Grosse-Kunstleve; Nathaniel Echols; Jeffrey J Headd; Nigel W Moriarty; Marat Mustyakimov; Thomas C Terwilliger; Alexandre Urzhumtsev; Peter H Zwart; Paul D Adams
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2012-03-16

10.  Some practical guidelines for UV imaging in the protein crystallization laboratory.

Authors:  Sebastien Desbois; Shane A Seabrook; Janet Newman
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2013-01-26
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  1 in total

1.  Protein quantification and visualization via ultraviolet-dependent labeling with 2,2,2-trichloroethanol.

Authors:  Anand Chopra; William G Willmore; Kyle K Biggar
Journal:  Sci Rep       Date:  2019-09-26       Impact factor: 4.379

  1 in total

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