Literature DB >> 24419610

Introduction to protein crystallization.

Alexander McPherson1, Jose A Gavira2.   

Abstract

Protein crystallization was discovered by chance about 150 years ago and was developed in the late 19th century as a powerful purification tool and as a demonstration of chemical purity. The crystallization of proteins, nucleic acids and large biological complexes, such as viruses, depends on the creation of a solution that is supersaturated in the macromolecule but exhibits conditions that do not significantly perturb its natural state. Supersaturation is produced through the addition of mild precipitating agents such as neutral salts or polymers, and by the manipulation of various parameters that include temperature, ionic strength and pH. Also important in the crystallization process are factors that can affect the structural state of the macromolecule, such as metal ions, inhibitors, cofactors or other conventional small molecules. A variety of approaches have been developed that combine the spectrum of factors that effect and promote crystallization, and among the most widely used are vapor diffusion, dialysis, batch and liquid-liquid diffusion. Successes in macromolecular crystallization have multiplied rapidly in recent years owing to the advent of practical, easy-to-use screening kits and the application of laboratory robotics. A brief review will be given here of the most popular methods, some guiding principles and an overview of current technologies.

Entities:  

Keywords:  IYCr; crystallization; proteins

Mesh:

Substances:

Year:  2013        PMID: 24419610      PMCID: PMC3943105          DOI: 10.1107/S2053230X13033141

Source DB:  PubMed          Journal:  Acta Crystallogr F Struct Biol Commun        ISSN: 2053-230X            Impact factor:   1.056


  55 in total

Review 1.  Membrane protein structural biology: the high throughput challenge.

Authors:  Patrick J Loll
Journal:  J Struct Biol       Date:  2003-04       Impact factor: 2.867

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Authors:  R Giegé; B Lorber; A Théobald-Dietrich
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1994-07-01

3.  Effects of naturally occurring osmolytes on protein stability and solubility: issues important in protein crystallization.

Authors:  D W Bolen
Journal:  Methods       Date:  2004-11       Impact factor: 3.608

4.  Observations on the Crystallization of Animal Proteids.

Authors:  F G Hopkins; S N Pinkus
Journal:  J Physiol       Date:  1898-06-10       Impact factor: 5.182

5.  Evaluating the efficacy of tryptophan fluorescence and absorbance as a selection tool for identifying protein crystals.

Authors:  Harindarpal S Gill
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2010-02-27

6.  Detergents: an overview.

Authors:  J M Neugebauer
Journal:  Methods Enzymol       Date:  1990       Impact factor: 1.600

7.  Precipitation of proteins with polyethylene glycol.

Authors:  K C Ingham
Journal:  Methods Enzymol       Date:  1990       Impact factor: 1.600

Review 8.  The Hofmeister effect and the behaviour of water at interfaces.

Authors:  K D Collins; M W Washabaugh
Journal:  Q Rev Biophys       Date:  1985-11       Impact factor: 5.318

9.  Ab initio crystallographic structure determination of insulin from protein to electron density without crystal handling.

Authors:  José A Gavira; Diana Toh; Javier Lopéz-Jaramillo; Juan M García-Ruíz; Joseph D Ng
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2002-06-20

10.  Mechanisms of growth for protein and virus crystals.

Authors:  A J Malkin; T A Land; J J DeYoreo; A McPherson
Journal:  Nat Struct Biol       Date:  1995-11
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  47 in total

1.  Hyperstabilization of a thermophile bacterial laccase and its application for industrial dyes degradation.

Authors:  Julián E Gianolini; Claudia N Britos; Carlos B Mulreedy; Jorge A Trelles
Journal:  3 Biotech       Date:  2020-06-03       Impact factor: 2.406

2.  Droplet motions fill a periodic table.

Authors:  Paul H Steen; Chun-Ti Chang; Joshua B Bostwick
Journal:  Proc Natl Acad Sci U S A       Date:  2019-02-21       Impact factor: 11.205

3.  Searching for conditions of protein self-assembly by protein crystallization screening method.

Authors:  Tuo-Di Zhang; Liang-Liang Chen; Wen-Juan Lin; Wen-Pu Shi; Jia-Qi Wang; Chen-Yan Zhang; Wei-Hong Guo; Xudong Deng; Da-Chuan Yin
Journal:  Appl Microbiol Biotechnol       Date:  2021-03-08       Impact factor: 4.813

4.  DNA-Directed Protein Packing within Single Crystals.

Authors:  Peter H Winegar; Oliver G Hayes; Janet R McMillan; C Adrian Figg; Pamela J Focia; Chad A Mirkin
Journal:  Chem       Date:  2020-03-23       Impact factor: 22.804

5.  Super-Thresholding: Supervised Thresholding of Protein Crystal Images.

Authors:  Imren Dinc; Semih Dinc; Madhav Sigdel; Madhu S Sigdel; Marc L Pusey; Ramazan S Aygun
Journal:  IEEE/ACM Trans Comput Biol Bioinform       Date:  2016-03-16       Impact factor: 3.710

Review 6.  Therapeutic protein aggregation: mechanisms, design, and control.

Authors:  Christopher J Roberts
Journal:  Trends Biotechnol       Date:  2014-06-04       Impact factor: 19.536

Review 7.  Mass Spectrometry-Based Protein Footprinting for Higher-Order Structure Analysis: Fundamentals and Applications.

Authors:  Xiaoran Roger Liu; Mengru Mira Zhang; Michael L Gross
Journal:  Chem Rev       Date:  2020-04-22       Impact factor: 60.622

8.  Plasticity of Aminoglycoside Binding to Antibiotic Kinase APH(2″)-Ia.

Authors:  Shane J Caldwell; Albert M Berghuis
Journal:  Antimicrob Agents Chemother       Date:  2018-06-26       Impact factor: 5.191

9.  Optimizing Associative Experimental Design for Protein Crystallization Screening.

Authors:  Imren Dinc; Marc L Pusey; Ramazan S Aygun
Journal:  IEEE Trans Nanobioscience       Date:  2016-02-29       Impact factor: 2.935

Review 10.  Protein aggregation and its impact on product quality.

Authors:  Christopher J Roberts
Journal:  Curr Opin Biotechnol       Date:  2014-08-28       Impact factor: 9.740

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