Literature DB >> 20369858

Observation of pyridine aggregation in aqueous solution using neutron scattering experiments and MD simulations.

Philip E Mason1, George W Neilson, Christopher E Dempsey, David L Price, Marie-Louise Saboungi, John W Brady.   

Abstract

Neutron diffraction with isotopic substitution (NDIS) experiments have been used to examine the structuring of aqueous solutions of pyridine. A new method is described for extracting the structure factors relating to intermolecular correlations from neutron scattering experiments on liquid solutions of complex molecular species. This approach performs experiments at different concentrations and exploits the intramolecular coordination number concentration invariance (ICNCI) to separate the internal and intermolecular contributions to the total intensities. The ability of this method to deconvolute molecular and intermolecular correlations is tested and demonstrated using simulated neutron scattering results predicted from molecular dynamics simulations of aqueous solutions of the polyatomic solute n class="Chemical">pyridine in which the inter- and intramolecular terms are known. The method is then implemented using neutron scattering measurements on solutions of pyridine. The results confirm that pyridine shows a significant propensity to aggregate in solution and demonstrate the prospects for the future application of the ICNCI approach to the study of large polyatomic solutes using next-generation neutron sources and detectors.

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Year:  2010        PMID: 20369858      PMCID: PMC3168782          DOI: 10.1021/jp9097827

Source DB:  PubMed          Journal:  J Phys Chem B        ISSN: 1520-5207            Impact factor:   2.991


  14 in total

1.  Neutron diffraction and simulation studies of CsNO3 and Cs2CO3 solutions.

Authors:  Philip E Mason; George W Neilson; Christopher E Dempsey; John W Brady
Journal:  J Am Chem Soc       Date:  2006-11-29       Impact factor: 15.419

2.  Ion solvation and water structure in potassium halide aqueous solutions.

Authors:  Alan K Soper; Kristian Weckström
Journal:  Biophys Chem       Date:  2006-05-15       Impact factor: 2.352

3.  Nanometer-scale ion aggregates in aqueous electrolyte solutions: guanidinium sulfate and guanidinium thiocyanate.

Authors:  P E Mason; C E Dempsey; G W Neilson; J W Brady
Journal:  J Phys Chem B       Date:  2005-12-22       Impact factor: 2.991

4.  Hydration of sodium, potassium, and chloride ions in solution and the concept of structure maker/breaker.

Authors:  R Mancinelli; A Botti; F Bruni; M A Ricci; A K Soper
Journal:  J Phys Chem B       Date:  2007-11-08       Impact factor: 2.991

5.  Charge-based interactions between peptides observed as the dominant force for association in aqueous solution.

Authors:  Sylvia E McLain; Alan K Soper; Isabella Daidone; Jeremy C Smith; Anthony Watts
Journal:  Angew Chem Int Ed Engl       Date:  2008       Impact factor: 15.336

6.  Neutron diffraction and simulation studies of the exocyclic hydroxymethyl conformation of glucose.

Authors:  Philip E Mason; George W Neilson; John E Enderby; Marie-Louise Saboungi; Gabriel Cuello; John W Brady
Journal:  J Chem Phys       Date:  2006-12-14       Impact factor: 3.488

7.  Structure of liquid PEO-LiTFSI electrolyte

Authors: 
Journal:  Phys Rev Lett       Date:  2000-06-12       Impact factor: 9.161

8.  Molecular segregation observed in a concentrated alcohol-water solution.

Authors:  S Dixit; J Crain; W C K Poon; J L Finney; A K Soper
Journal:  Nature       Date:  2002-04-25       Impact factor: 49.962

9.  Determination of a hydroxyl conformation in aqueous xylose using neutron scattering and molecular dynamics.

Authors:  Philip E Mason; George W Neilson; John E Enderby; Marie-Louise Saboungi; John W Brady
Journal:  J Phys Chem B       Date:  2006-02-23       Impact factor: 2.991

10.  The structure of aqueous guanidinium chloride solutions.

Authors:  Philip E Mason; George W Neilson; John E Enderby; Marie-Louise Saboungi; Christopher E Dempsey; Alexander D MacKerell; John W Brady
Journal:  J Am Chem Soc       Date:  2004-09-22       Impact factor: 15.419

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  6 in total

Review 1.  Weakly hydrated surfaces and the binding interactions of small biological solutes.

Authors:  John W Brady; Letizia Tavagnacco; Laurent Ehrlich; Mo Chen; Udo Schnupf; Michael E Himmel; Marie-Louise Saboungi; Attilio Cesàro
Journal:  Eur Biophys J       Date:  2011-11-29       Impact factor: 1.733

2.  Molecular dynamics simulation studies of caffeine aggregation in aqueous solution.

Authors:  Letizia Tavagnacco; Udo Schnupf; Philip E Mason; Marie-Louise Saboungi; Attilio Cesàro; John W Brady
Journal:  J Phys Chem B       Date:  2011-08-30       Impact factor: 2.991

3.  Alteration of water structure by peptide clusters revealed by neutron scattering in the small-angle region (below 1 Å(-1)).

Authors:  Isabella Daidone; Claudio Iacobucci; Sylvia E McLain; Jeremy C Smith
Journal:  Biophys J       Date:  2012-10-02       Impact factor: 4.033

4.  Simulation and Neutron Diffraction Studies of Small Biomolecules in Water.

Authors:  Philip E Mason; George W Neilson; David Price; Marie-Louise Saboungi; John W Brady
Journal:  Food Biophys       Date:  2011-06       Impact factor: 3.114

5.  A new structural technique for examining ion-neutral association in aqueous solution.

Authors:  Philip E Mason; George W Neilson; David L Price; Marie-Louise Saboungi; John W Brady
Journal:  Faraday Discuss       Date:  2013       Impact factor: 4.008

6.  Electronic absorption spectra of pyridine and nicotine in aqueous solution with a combined molecular dynamics and polarizable QM/MM approach.

Authors:  Marco Pagliai; Giordano Mancini; Ivan Carnimeo; Nicola De Mitri; Vincenzo Barone
Journal:  J Comput Chem       Date:  2016-12-02       Impact factor: 3.376

  6 in total

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