Literature DB >> 15366892

The structure of aqueous guanidinium chloride solutions.

Philip E Mason1, George W Neilson, John E Enderby, Marie-Louise Saboungi, Christopher E Dempsey, Alexander D MacKerell, John W Brady.   

Abstract

The combination of neutron diffraction with isotopic substitution (NDIS) experiments and molecular dynamics (MD) simulations to characterize the structuring in an aqueous solution of the denaturant guanidinium chloride is described. The simulations and experiments were carried out at a concentration of 3 m at room temperature, allowing for an examination of any propensity for ion association in a realistic solution environment. The simulations satisfactorily reproduced the principal features of the neutron scattering and indicate a bimodal hydration of the guanidinium ions, with the N-H groups making well-ordered hydrogen bonds in the molecular plane, but with the planar faces relatively deficient in interactions with water. The most striking feature of these solutions is the rich ion-ion ordering observed around the guanidinium ion in the simulations. The marked tendency of the guanidinium ions to stack parallel to their water-deficient surfaces indicates that the efficiency of this ion as a denaturant is due to its ability to simultaneously interact favorably with both water and hydrophobic side chains of proteins.

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Year:  2004        PMID: 15366892     DOI: 10.1021/ja040034x

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  42 in total

Review 1.  Weakly hydrated surfaces and the binding interactions of small biological solutes.

Authors:  John W Brady; Letizia Tavagnacco; Laurent Ehrlich; Mo Chen; Udo Schnupf; Michael E Himmel; Marie-Louise Saboungi; Attilio Cesàro
Journal:  Eur Biophys J       Date:  2011-11-29       Impact factor: 1.733

2.  The interaction of guanidinium ions with a model peptide.

Authors:  Philip E Mason; John W Brady; George W Neilson; Christopher E Dempsey
Journal:  Biophys J       Date:  2007-04-20       Impact factor: 4.033

3.  Molecular dynamics simulation studies of caffeine aggregation in aqueous solution.

Authors:  Letizia Tavagnacco; Udo Schnupf; Philip E Mason; Marie-Louise Saboungi; Attilio Cesàro; John W Brady
Journal:  J Phys Chem B       Date:  2011-08-30       Impact factor: 2.991

4.  Amino acid contribution to protein solubility: Asp, Glu, and Ser contribute more favorably than the other hydrophilic amino acids in RNase Sa.

Authors:  Saul R Trevino; J Martin Scholtz; C Nick Pace
Journal:  J Mol Biol       Date:  2006-10-13       Impact factor: 5.469

5.  Solvation counteracts coulombic repulsion in the binding of two cations to a model hexapeptide.

Authors:  Hongqi Ai; Chong Zhang; Wei He; Kwaichow Chan; Qiang Li
Journal:  J Mol Model       Date:  2011-03-29       Impact factor: 1.810

6.  Protein folding, protein collapse, and tanford's transfer model: lessons from single-molecule FRET.

Authors:  Guy Ziv; Gilad Haran
Journal:  J Am Chem Soc       Date:  2009-03-04       Impact factor: 15.419

7.  Water structuring above solutes with planar hydrophobic surfaces.

Authors:  Udo Schnupf; John W Brady
Journal:  Phys Chem Chem Phys       Date:  2017-05-17       Impact factor: 3.676

Review 8.  New tricks for old dogs: improving the accuracy of biomolecular force fields by pair-specific corrections to non-bonded interactions.

Authors:  Jejoong Yoo; Aleksei Aksimentiev
Journal:  Phys Chem Chem Phys       Date:  2018-03-28       Impact factor: 3.676

9.  Polyarginine Interacts More Strongly and Cooperatively than Polylysine with Phospholipid Bilayers.

Authors:  Aaron D Robison; Simou Sun; Matthew F Poyton; Gregory A Johnson; Jean-Philippe Pellois; Pavel Jungwirth; Mario Vazdar; Paul S Cremer
Journal:  J Phys Chem B       Date:  2016-08-29       Impact factor: 2.991

10.  Ultrafast vibrational spectroscopy of a degenerate mode of guanidinium chloride.

Authors:  Dmitriy Yu Vorobyev; Chun-Hung Kuo; Jian-Xin Chen; Daniel G Kuroda; J Nathan Scott; Jane M Vanderkooi; Robin M Hochstrasser
Journal:  J Phys Chem B       Date:  2009-11-19       Impact factor: 2.991

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