Literature DB >> 20349983

Sensitivity enhancement of separated local field experiments: application to membrane proteins.

T Gopinath1, Raffaello Verardi, Nathaniel J Traaseth, Gianluigi Veglia.   

Abstract

Separated local field (SLF) experiments have been used for almost three decades to obtain structural information in solid-state NMR. These experiments resolve chemical shift anisotropy (CSA) from dipole-dipole interactions (dipolar couplings, DC) in isolated spin systems. Both CSA and DC data can be converted into orientational constraints to elucidate the secondary structure and topology of membrane proteins in oriented lipid bilayers. Here, we propose a new suite of sensitivity enhanced SLF pulse sequences to measure CSA and DC for aligned membrane proteins and liquid crystalline molecules that will decrease the time needed for data acquisition. We demonstrate the efficacy of these new sensitivity enhanced experiments using both a single crystal of N-acetyl leucine and a single pass membrane protein sarcolipin reconstituted in aligned lipid bicelles. These results lay the groundwork for the routine application of this methodology for studying the structure and topology of membrane proteins.

Entities:  

Mesh:

Substances:

Year:  2010        PMID: 20349983      PMCID: PMC2861489          DOI: 10.1021/jp909778a

Source DB:  PubMed          Journal:  J Phys Chem B        ISSN: 1520-5207            Impact factor:   2.991


  49 in total

1.  Complete cross-validation and R-factor calculation of a solid-state NMR derived structure.

Authors:  S Kim; J R Quine; T A Cross
Journal:  J Am Chem Soc       Date:  2001-08-01       Impact factor: 15.419

2.  13C NMR of liquid crystals with different proton homonuclear dipolar decoupling methods

Authors: 
Journal:  J Magn Reson       Date:  1999-05       Impact factor: 2.229

3.  14N Polarization Inversion Spin Exchange at Magic Angle (PISEMA).

Authors:  Chunqi Qian; Riqiang Fu; Peter Gor'kov; William W Brey; Timothy A Cross; Zhehong Gan
Journal:  J Magn Reson       Date:  2008-10-17       Impact factor: 2.229

4.  Spectroscopic validation of the pentameric structure of phospholamban.

Authors:  Nathaniel J Traaseth; Raffaello Verardi; Kurt D Torgersen; Christine B Karim; David D Thomas; Gianluigi Veglia
Journal:  Proc Natl Acad Sci U S A       Date:  2007-09-05       Impact factor: 11.205

5.  High-resolution conformation of gramicidin A in a lipid bilayer by solid-state NMR.

Authors:  R R Ketchem; W Hu; T A Cross
Journal:  Science       Date:  1993-09-10       Impact factor: 47.728

6.  High-resolution polypeptide structure in a lamellar phase lipid environment from solid state NMR derived orientational constraints.

Authors:  R Ketchem; B Roux; T Cross
Journal:  Structure       Date:  1997-12-15       Impact factor: 5.006

7.  Two-dimensional solid-state NMR reveals two topologies of sarcolipin in oriented lipid bilayers.

Authors:  Jarrod J Buffy; Nathaniel J Traaseth; Alessandro Mascioni; Peter L Gor'kov; Eduard Y Chekmenev; William W Brey; Gianluigi Veglia
Journal:  Biochemistry       Date:  2006-09-12       Impact factor: 3.162

8.  Structure of the coat protein in Pf1 bacteriophage determined by solid-state NMR spectroscopy.

Authors:  David S Thiriot; Alexander A Nevzorov; Lena Zagyanskiy; Chin H Wu; Stanley J Opella
Journal:  J Mol Biol       Date:  2004-08-13       Impact factor: 5.469

9.  Characterization of magnetically orientable bilayers in mixtures of dihexanoylphosphatidylcholine and dimyristoylphosphatidylcholine by solid-state NMR.

Authors:  C R Sanders; J P Schwonek
Journal:  Biochemistry       Date:  1992-09-22       Impact factor: 3.162

Review 10.  Structural and dynamic basis of phospholamban and sarcolipin inhibition of Ca(2+)-ATPase.

Authors:  Nathaniel J Traaseth; Kim N Ha; Raffaello Verardi; Lei Shi; Jarrod J Buffy; Larry R Masterson; Gianluigi Veglia
Journal:  Biochemistry       Date:  2007-12-15       Impact factor: 3.162

View more
  18 in total

1.  Multidimensional oriented solid-state NMR experiments enable the sequential assignment of uniformly 15N labeled integral membrane proteins in magnetically aligned lipid bilayers.

Authors:  Kaustubh R Mote; T Gopinath; Nathaniel J Traaseth; Jason Kitchen; Peter L Gor'kov; William W Brey; Gianluigi Veglia
Journal:  J Biomol NMR       Date:  2011-11       Impact factor: 2.835

2.  Dual acquisition magic-angle spinning solid-state NMR-spectroscopy: simultaneous acquisition of multidimensional spectra of biomacromolecules.

Authors:  T Gopinath; Gianluigi Veglia
Journal:  Angew Chem Int Ed Engl       Date:  2012-02-06       Impact factor: 15.336

3.  Proton evolved local field solid-state nuclear magnetic resonance using Hadamard encoding: theory and application to membrane proteins.

Authors:  T Gopinath; Kaustubh R Mote; Gianluigi Veglia
Journal:  J Chem Phys       Date:  2011-08-21       Impact factor: 3.488

4.  Improving the quality of oriented membrane protein spectra using heat-compensated separated local field experiments.

Authors:  Songlin Wang; T Gopinath; Gianluigi Veglia
Journal:  J Biomol NMR       Date:  2019-08-28       Impact factor: 2.835

5.  Orphan spin operators enable the acquisition of multiple 2D and 3D magic angle spinning solid-state NMR spectra.

Authors:  T Gopinath; Gianluigi Veglia
Journal:  J Chem Phys       Date:  2013-05-14       Impact factor: 3.488

6.  Application of paramagnetic relaxation enhancements to accelerate the acquisition of 2D and 3D solid-state NMR spectra of oriented membrane proteins.

Authors:  Songlin Wang; T Gopinath; Gianluigi Veglia
Journal:  Methods       Date:  2017-12-22       Impact factor: 3.608

7.  Simultaneous acquisition of 2D and 3D solid-state NMR experiments for sequential assignment of oriented membrane protein samples.

Authors:  T Gopinath; Kaustubh R Mote; Gianluigi Veglia
Journal:  J Biomol NMR       Date:  2015-03-07       Impact factor: 2.835

8.  Solid state NMR strategy for characterizing native membrane protein structures.

Authors:  Dylan T Murray; Nabanita Das; Timothy A Cross
Journal:  Acc Chem Res       Date:  2013-03-07       Impact factor: 22.384

Review 9.  Spatial reorientation experiments for NMR of solids and partially oriented liquids.

Authors:  Rachel W Martin; John E Kelly; Kelsey A Collier
Journal:  Prog Nucl Magn Reson Spectrosc       Date:  2015-10-23       Impact factor: 9.795

10.  Identifying inter-residue resonances in crowded 2D (13)C- (13)C chemical shift correlation spectra of membrane proteins by solid-state MAS NMR difference spectroscopy.

Authors:  Yimin Miao; Timothy A Cross; Riqiang Fu
Journal:  J Biomol NMR       Date:  2013-05-25       Impact factor: 2.835

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.