Literature DB >> 29274874

Application of paramagnetic relaxation enhancements to accelerate the acquisition of 2D and 3D solid-state NMR spectra of oriented membrane proteins.

Songlin Wang1, T Gopinath1, Gianluigi Veglia2.   

Abstract

Oriented sample solid-state NMR (OS-ssNMR) spectroscopy is uniquely suited to determine membrane protein topology at the atomic resolution in liquid crystalline bilayers under physiological temperature. However, the inherent low sensitivity of this technique has hindered the throughput of multidimensional experiments necessary for resonance assignments and structure determination. In this work, we show that doping membrane protein bicelle preparations with paramagnetic ion chelated lipids and exploiting paramagnetic relaxation effects it is possible to accelerate the acquisition of both 2D and 3D multidimensional experiments with significant saving in time. We demonstrate the efficacy of this method for a small membrane protein, sarcolipin, reconstituted in DMPC/POPC/DHPC oriented bicelles. In particular, using Cu2+-DMPE-DTPA as a dopant, we observed a decrease of 1H T1 of sarcolipin by 2/3, allowing us to reduce the recycle delay up to 3 times. We anticipate that these new developments will enable the routine acquisition of multidimensional OS-ssNMR experiments.
Copyright © 2017 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Oriented sample solid-state NMR; Paramagnetic relaxation enhancements; Sensitivity enhancement; Separated local fields

Mesh:

Substances:

Year:  2017        PMID: 29274874      PMCID: PMC5984106          DOI: 10.1016/j.ymeth.2017.12.017

Source DB:  PubMed          Journal:  Methods        ISSN: 1046-2023            Impact factor:   3.608


  66 in total

Review 1.  Oligomeric structure, dynamics, and orientation of membrane proteins from solid-state NMR.

Authors:  Mei Hong
Journal:  Structure       Date:  2006-12       Impact factor: 5.006

2.  Bioinspired, Size-Tunable Self-Assembly of Polymer-Lipid Bilayer Nanodiscs.

Authors:  Thirupathi Ravula; Sudheer Kumar Ramadugu; Giacomo Di Mauro; Ayyalusamy Ramamoorthy
Journal:  Angew Chem Int Ed Engl       Date:  2017-08-10       Impact factor: 15.336

3.  Probing water accessibility in HET-s(218-289) amyloid fibrils by solid-state NMR.

Authors:  Hélène Van Melckebeke; Paul Schanda; Julia Gath; Christian Wasmer; René Verel; Adam Lange; Beat H Meier; Anja Böckmann
Journal:  J Mol Biol       Date:  2010-11-19       Impact factor: 5.469

4.  Line-Broadening in Low-Temperature Solid-State NMR Spectra of Fibrils.

Authors:  Thomas Bauer; Claudio Dotta; Livia Balacescu; Julia Gath; Andreas Hunkeler; Anja Böckmann; Beat H Meier
Journal:  J Biomol NMR       Date:  2017-02-04       Impact factor: 2.835

5.  Quantitative analysis of the water occupancy around the selectivity filter of a K+ channel in different gating modes.

Authors:  Markus Weingarth; Elwin A W van der Cruijsen; Jared Ostmeyer; Sylke Lievestro; Benoît Roux; Marc Baldus
Journal:  J Am Chem Soc       Date:  2014-01-22       Impact factor: 15.419

6.  NMR detection of pH-dependent histidine-water proton exchange reveals the conduction mechanism of a transmembrane proton channel.

Authors:  Fanghao Hu; Klaus Schmidt-Rohr; Mei Hong
Journal:  J Am Chem Soc       Date:  2011-10-21       Impact factor: 15.419

Review 7.  Sarcolipin and phospholamban as regulators of cardiac sarcoplasmic reticulum Ca2+ ATPase.

Authors:  Poornima Bhupathy; Gopal J Babu; Muthu Periasamy
Journal:  J Mol Cell Cardiol       Date:  2007-03-12       Impact factor: 5.000

Review 8.  Sensitivity and resolution enhancement of oriented solid-state NMR: application to membrane proteins.

Authors:  T Gopinath; Kaustubh R Mote; Gianluigi Veglia
Journal:  Prog Nucl Magn Reson Spectrosc       Date:  2013-08-12       Impact factor: 9.795

Review 9.  Structural and dynamic basis of phospholamban and sarcolipin inhibition of Ca(2+)-ATPase.

Authors:  Nathaniel J Traaseth; Kim N Ha; Raffaello Verardi; Lei Shi; Jarrod J Buffy; Larry R Masterson; Gianluigi Veglia
Journal:  Biochemistry       Date:  2007-12-15       Impact factor: 3.162

10.  Solid-state NMR (31)P paramagnetic relaxation enhancement membrane protein immersion depth measurements.

Authors:  Sergey Maltsev; Stephen M Hudson; Indra D Sahu; Lishan Liu; Gary A Lorigan
Journal:  J Phys Chem B       Date:  2014-04-11       Impact factor: 2.991

View more
  5 in total

1.  Improving the quality of oriented membrane protein spectra using heat-compensated separated local field experiments.

Authors:  Songlin Wang; T Gopinath; Gianluigi Veglia
Journal:  J Biomol NMR       Date:  2019-08-28       Impact factor: 2.835

Review 2.  Use of paramagnetic systems to speed-up NMR data acquisition and for structural and dynamic studies.

Authors:  Vojč Kocman; Giacomo M Di Mauro; Gianluigi Veglia; Ayyalusamy Ramamoorthy
Journal:  Solid State Nucl Magn Reson       Date:  2019-07-12       Impact factor: 2.293

3.  A theoretical assessment of structure determination of multi-span membrane proteins by oriented sample solid-state NMR spectroscopy.

Authors:  Daniel K Weber; Gianluigi Veglia
Journal:  Aust J Chem       Date:  2019-09-20       Impact factor: 1.321

4.  Structural basis for sarcolipin's regulation of muscle thermogenesis by the sarcoplasmic reticulum Ca2+-ATPase.

Authors:  Songlin Wang; Tata Gopinath; Erik K Larsen; Daniel K Weber; Caitlin Walker; Venkateswara Reddy Uddigiri; Kaustubh R Mote; Sanjaya K Sahoo; Muthu Periasamy; Gianluigi Veglia
Journal:  Sci Adv       Date:  2021-11-26       Impact factor: 14.136

5.  Gadolinium Complexes as Contrast Agent for Cellular NMR Spectroscopy.

Authors:  Nat Sakol; Ayako Egawa; Toshimichi Fujiwara
Journal:  Int J Mol Sci       Date:  2020-06-05       Impact factor: 5.923

  5 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.