Literature DB >> 20300089

Chromatin structure and the inheritance of epigenetic information.

Raphaël Margueron1, Danny Reinberg.   

Abstract

Although it is widely accepted that the regulation of the chromatin landscape is pivotal to conveying the epigenetic program, it is still unclear how a defined chromatin domain is reproduced following DNA replication and transmitted from one cell generation to the next. Here, we review the multiple mechanisms that potentially affect the inheritance of epigenetic information in somatic cells. We consider models of how histones might be recycled following replication, and discuss the importance of positive-feedback loops, long-range gene interactions and the complex network of trans-acting factors in the transmission of chromatin states.

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Year:  2010        PMID: 20300089      PMCID: PMC3760772          DOI: 10.1038/nrg2752

Source DB:  PubMed          Journal:  Nat Rev Genet        ISSN: 1471-0056            Impact factor:   53.242


  142 in total

1.  A targeting sequence directs DNA methyltransferase to sites of DNA replication in mammalian nuclei.

Authors:  H Leonhardt; A W Page; H U Weier; T H Bestor
Journal:  Cell       Date:  1992-11-27       Impact factor: 41.582

Review 2.  Chromatin modifications and their function.

Authors:  Tony Kouzarides
Journal:  Cell       Date:  2007-02-23       Impact factor: 41.582

3.  Analysis of the H19ICR insulator.

Authors:  Young Soo Yoon; Sangkyun Jeong; Qi Rong; Kye-Yoon Park; Jae Hoon Chung; Karl Pfeifer
Journal:  Mol Cell Biol       Date:  2007-03-05       Impact factor: 4.272

4.  SWI/SNF is required for transcriptional memory at the yeast GAL gene cluster.

Authors:  Sharmistha Kundu; Peter J Horn; Craig L Peterson
Journal:  Genes Dev       Date:  2007-04-15       Impact factor: 11.361

5.  Long noncoding RNAs in mouse embryonic stem cell pluripotency and differentiation.

Authors:  Marcel E Dinger; Paulo P Amaral; Tim R Mercer; Ken C Pang; Stephen J Bruce; Brooke B Gardiner; Marjan E Askarian-Amiri; Kelin Ru; Giulia Soldà; Cas Simons; Susan M Sunkin; Mark L Crowe; Sean M Grimmond; Andrew C Perkins; John S Mattick
Journal:  Genome Res       Date:  2008-06-18       Impact factor: 9.043

6.  RNA interference guides histone modification during the S phase of chromosomal replication.

Authors:  Anna Kloc; Mikel Zaratiegui; Elphege Nora; Rob Martienssen
Journal:  Curr Biol       Date:  2008-04-08       Impact factor: 10.834

7.  Conservation of deposition-related acetylation sites in newly synthesized histones H3 and H4.

Authors:  R E Sobel; R G Cook; C A Perry; A T Annunziato; C D Allis
Journal:  Proc Natl Acad Sci U S A       Date:  1995-02-14       Impact factor: 11.205

8.  Relationship between histone H3 lysine 9 methylation, transcription repression, and heterochromatin protein 1 recruitment.

Authors:  M David Stewart; Jiwen Li; Jiemin Wong
Journal:  Mol Cell Biol       Date:  2005-04       Impact factor: 4.272

9.  RNAi-dependent H3K27 methylation is required for heterochromatin formation and DNA elimination in Tetrahymena.

Authors:  Yifan Liu; Sean D Taverna; Tara L Muratore; Jeffrey Shabanowitz; Donald F Hunt; C David Allis
Journal:  Genes Dev       Date:  2007-06-15       Impact factor: 11.361

10.  The Air noncoding RNA epigenetically silences transcription by targeting G9a to chromatin.

Authors:  Takashi Nagano; Jennifer A Mitchell; Lionel A Sanz; Florian M Pauler; Anne C Ferguson-Smith; Robert Feil; Peter Fraser
Journal:  Science       Date:  2008-11-06       Impact factor: 47.728

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  316 in total

Review 1.  In utero oxidative stress epigenetically programs antioxidant defense capacity and adulthood diseases.

Authors:  Rita S Strakovsky; Yuan-Xiang Pan
Journal:  Antioxid Redox Signal       Date:  2012-01-11       Impact factor: 8.401

Review 2.  Linking DNA replication to heterochromatin silencing and epigenetic inheritance.

Authors:  Qing Li; Zhiguo Zhang
Journal:  Acta Biochim Biophys Sin (Shanghai)       Date:  2012-01       Impact factor: 3.848

Review 3.  Early progress in epigenetic regulation of endothelin pathway genes.

Authors:  A K Welch; M E Jacobs; C S Wingo; B D Cain
Journal:  Br J Pharmacol       Date:  2013-01       Impact factor: 8.739

Review 4.  Polycomb group complexes mediate developmental transitions in plants.

Authors:  Sarah Holec; Frédéric Berger
Journal:  Plant Physiol       Date:  2011-11-15       Impact factor: 8.340

5.  A model for mitotic inheritance of histone lysine methylation.

Authors:  Mo Xu; Weixiang Wang; She Chen; Bing Zhu
Journal:  EMBO Rep       Date:  2011-12-23       Impact factor: 8.807

Review 6.  Chromatin replication and epigenome maintenance.

Authors:  Constance Alabert; Anja Groth
Journal:  Nat Rev Mol Cell Biol       Date:  2012-02-23       Impact factor: 94.444

7.  Epigenomics: Catching nucleosomes in action.

Authors:  Mary Muers
Journal:  Nat Rev Genet       Date:  2010-07       Impact factor: 53.242

8.  The evolution of epitype.

Authors:  Richard B Meagher
Journal:  Plant Cell       Date:  2010-06-15       Impact factor: 11.277

Review 9.  Epigenetic plasticity and the hallmarks of cancer.

Authors:  William A Flavahan; Elizabeth Gaskell; Bradley E Bernstein
Journal:  Science       Date:  2017-07-21       Impact factor: 47.728

10.  Widespread Mitotic Bookmarking by Histone Marks and Transcription Factors in Pluripotent Stem Cells.

Authors:  Yiyuan Liu; Bobbie Pelham-Webb; Dafne Campigli Di Giammartino; Jiexi Li; Daleum Kim; Katsuhiro Kita; Nestor Saiz; Vidur Garg; Ashley Doane; Paraskevi Giannakakou; Anna-Katerina Hadjantonakis; Olivier Elemento; Effie Apostolou
Journal:  Cell Rep       Date:  2017-05-16       Impact factor: 9.423

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