Literature DB >> 22358331

Chromatin replication and epigenome maintenance.

Constance Alabert1, Anja Groth.   

Abstract

Stability and function of eukaryotic genomes are closely linked to chromatin structure and organization. During cell division the entire genome must be accurately replicated and the chromatin landscape reproduced on new DNA. Chromatin and nuclear structure influence where and when DNA replication initiates, whereas the replication process itself disrupts chromatin and challenges established patterns of genome regulation. Specialized replication-coupled mechanisms assemble new DNA into chromatin, but epigenome maintenance is a continuous process taking place throughout the cell cycle. If DNA synthesis is perturbed, cells can suffer loss of both genome and epigenome integrity with severe consequences for the organism.

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Year:  2012        PMID: 22358331     DOI: 10.1038/nrm3288

Source DB:  PubMed          Journal:  Nat Rev Mol Cell Biol        ISSN: 1471-0072            Impact factor:   94.444


  197 in total

1.  Methyl-CpG binding protein MBD1 couples histone H3 methylation at lysine 9 by SETDB1 to DNA replication and chromatin assembly.

Authors:  Shireen A Sarraf; Irina Stancheva
Journal:  Mol Cell       Date:  2004-08-27       Impact factor: 17.970

2.  A role for cell-cycle-regulated histone H3 lysine 56 acetylation in the DNA damage response.

Authors:  Hiroshi Masumoto; David Hawke; Ryuji Kobayashi; Alain Verreault
Journal:  Nature       Date:  2005-07-14       Impact factor: 49.962

3.  Excess MCM proteins protect human cells from replicative stress by licensing backup origins of replication.

Authors:  Arkaitz Ibarra; Etienne Schwob; Juan Méndez
Journal:  Proc Natl Acad Sci U S A       Date:  2008-06-25       Impact factor: 11.205

Review 4.  How dormant origins promote complete genome replication.

Authors:  J Julian Blow; Xin Quan Ge; Dean A Jackson
Journal:  Trends Biochem Sci       Date:  2011-06-07       Impact factor: 13.807

Review 5.  The role of the DNA sliding clamp in Okazaki fragment maturation in archaea and eukaryotes.

Authors:  Thomas R Beattie; Stephen D Bell
Journal:  Biochem Soc Trans       Date:  2011-01       Impact factor: 5.407

6.  Proliferating cell nuclear antigen associates with histone deacetylase activity, integrating DNA replication and chromatin modification.

Authors:  Snezana Milutinovic; Qianli Zhuang; Moshe Szyf
Journal:  J Biol Chem       Date:  2002-04-02       Impact factor: 5.157

7.  Structure of a CENP-A-histone H4 heterodimer in complex with chaperone HJURP.

Authors:  Hao Hu; Yang Liu; Mingzhu Wang; Junnan Fang; Hongda Huang; Na Yang; Yanbo Li; Jianyu Wang; Xuebiao Yao; Yunyu Shi; Guohong Li; Rui-Ming Xu
Journal:  Genes Dev       Date:  2011-04-08       Impact factor: 11.361

8.  Saccharomyces cerevisiae chromatin-assembly factors that act during DNA replication function in the maintenance of genome stability.

Authors:  Kyungjae Myung; Vincent Pennaneach; Ellen S Kats; Richard D Kolodner
Journal:  Proc Natl Acad Sci U S A       Date:  2003-05-15       Impact factor: 11.205

9.  Increased methylation variation in epigenetic domains across cancer types.

Authors:  Kasper Daniel Hansen; Winston Timp; Héctor Corrada Bravo; Sarven Sabunciyan; Benjamin Langmead; Oliver G McDonald; Bo Wen; Hao Wu; Yun Liu; Dinh Diep; Eirikur Briem; Kun Zhang; Rafael A Irizarry; Andrew P Feinberg
Journal:  Nat Genet       Date:  2011-06-26       Impact factor: 38.330

10.  Dynamics of Dnmt1 interaction with the replication machinery and its role in postreplicative maintenance of DNA methylation.

Authors:  Lothar Schermelleh; Andrea Haemmer; Fabio Spada; Nicole Rösing; Daniela Meilinger; Ulrich Rothbauer; M Cristina Cardoso; Heinrich Leonhardt
Journal:  Nucleic Acids Res       Date:  2007-06-18       Impact factor: 16.971

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  205 in total

Review 1.  Breaking Symmetry - Asymmetric Histone Inheritance in Stem Cells.

Authors:  Jing Xie; Matthew Wooten; Vuong Tran; Xin Chen
Journal:  Trends Cell Biol       Date:  2017-03-06       Impact factor: 20.808

2.  Totipotency in the absence of CAF-I: unhindered choices when the chaperone is out.

Authors:  Krassimir Yankulov
Journal:  Nucleus       Date:  2015-12-28       Impact factor: 4.197

3.  HBO1 (KAT7) Does Not Have an Essential Role in Cell Proliferation, DNA Replication, or Histone 4 Acetylation in Human Cells.

Authors:  Anne K Voss; Tim Thomas; Andrew J Kueh; Samantha Eccles; Leonie Tang; Alexandra L Garnham; Rose E May; Marco J Herold; Gordon K Smyth
Journal:  Mol Cell Biol       Date:  2020-01-30       Impact factor: 4.272

4.  Adenovirus E1A oncogene induces rereplication of cellular DNA and alters DNA replication dynamics.

Authors:  Ghata Singhal; Elisabetta Leo; Saayi Krushna Gadham Setty; Yves Pommier; Bayar Thimmapaya
Journal:  J Virol       Date:  2013-06-05       Impact factor: 5.103

Review 5.  Environmental epigenetics and its implication on disease risk and health outcomes.

Authors:  Shuk-Mei Ho; Abby Johnson; Pheruza Tarapore; Vinothini Janakiram; Xiang Zhang; Yuet-Kin Leung
Journal:  ILAR J       Date:  2012

6.  Transcriptional response to stress in the dynamic chromatin environment of cycling and mitotic cells.

Authors:  Anniina Vihervaara; Christian Sergelius; Jenni Vasara; Malin A H Blom; Alexandra N Elsing; Pia Roos-Mattjus; Lea Sistonen
Journal:  Proc Natl Acad Sci U S A       Date:  2013-08-19       Impact factor: 11.205

Review 7.  Long non-coding RNAs: modulators of nuclear structure and function.

Authors:  Jan H Bergmann; David L Spector
Journal:  Curr Opin Cell Biol       Date:  2013-09-20       Impact factor: 8.382

8.  Holliday junction recognition protein interacts with and specifies the centromeric assembly of CENP-T.

Authors:  Mingrui Ding; Jiying Jiang; Fengrui Yang; Fan Zheng; Jingwen Fang; Qian Wang; Jianyu Wang; William Yao; Xu Liu; Xinjiao Gao; McKay Mullen; Ping He; Cathy Rono; Xia Ding; Jingjun Hong; Chuanhai Fu; Xing Liu; Xuebiao Yao
Journal:  J Biol Chem       Date:  2018-11-20       Impact factor: 5.157

Review 9.  The control of histone methylation and gene expression by oxidative stress, hypoxia, and metals.

Authors:  Yana Chervona; Max Costa
Journal:  Free Radic Biol Med       Date:  2012-07-25       Impact factor: 7.376

10.  Multiplexed data independent acquisition (MSX-DIA) applied by high resolution mass spectrometry improves quantification quality for the analysis of histone peptides.

Authors:  Simone Sidoli; Rina Fujiwara; Benjamin A Garcia
Journal:  Proteomics       Date:  2016-06-08       Impact factor: 3.984

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