Literature DB >> 22056817

A model for mitotic inheritance of histone lysine methylation.

Mo Xu1, Weixiang Wang, She Chen, Bing Zhu.   

Abstract

Histone lysine methylation has been implicated in epigenetic regulation of transcription. Using stable-isotope labelling and quantitative mass spectrometry, we analysed the dynamics of histone lysine methylation. Here we report that histone methylation levels are transiently reduced during S phase and are gradually re-established during subsequent cell cycle stages. However, despite the recovery of overall methylation levels before the next S phase, the methylation levels of parental and newly incorporated histones differ significantly. In addition, histone methylation levels are maintained at steady states by both restriction of methyltransferase activity and the active turnover of methyl groups in cells undergoing an extended G1/S phase arrest. Finally, we propose a 'buffer model' that unifies the imprecise inheritance of histone methylation and the faithful maintenance of underlying gene silencing.

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Year:  2011        PMID: 22056817      PMCID: PMC3246248          DOI: 10.1038/embor.2011.206

Source DB:  PubMed          Journal:  EMBO Rep        ISSN: 1469-221X            Impact factor:   8.807


  39 in total

1.  Histone methyltransferase activity of a Drosophila Polycomb group repressor complex.

Authors:  Jürg Müller; Craig M Hart; Nicole J Francis; Marcus L Vargas; Aditya Sengupta; Brigitte Wild; Ellen L Miller; Michael B O'Connor; Robert E Kingston; Jeffrey A Simon
Journal:  Cell       Date:  2002-10-18       Impact factor: 41.582

2.  Role of histone H3 lysine 27 methylation in Polycomb-group silencing.

Authors:  Ru Cao; Liangjun Wang; Hengbin Wang; Li Xia; Hediye Erdjument-Bromage; Paul Tempst; Richard S Jones; Yi Zhang
Journal:  Science       Date:  2002-09-26       Impact factor: 47.728

3.  Polycomb complexes repress developmental regulators in murine embryonic stem cells.

Authors:  Laurie A Boyer; Kathrin Plath; Julia Zeitlinger; Tobias Brambrink; Lea A Medeiros; Tong Ihn Lee; Stuart S Levine; Marius Wernig; Adriana Tajonar; Mridula K Ray; George W Bell; Arie P Otte; Miguel Vidal; David K Gifford; Richard A Young; Rudolf Jaenisch
Journal:  Nature       Date:  2006-04-19       Impact factor: 49.962

4.  Control of developmental regulators by Polycomb in human embryonic stem cells.

Authors:  Tong Ihn Lee; Richard G Jenner; Laurie A Boyer; Matthew G Guenther; Stuart S Levine; Roshan M Kumar; Brett Chevalier; Sarah E Johnstone; Megan F Cole; Kyo-ichi Isono; Haruhiko Koseki; Takuya Fuchikami; Kuniya Abe; Heather L Murray; Jacob P Zucker; Bingbing Yuan; George W Bell; Elizabeth Herbolsheimer; Nancy M Hannett; Kaiming Sun; Duncan T Odom; Arie P Otte; Thomas L Volkert; David P Bartel; Douglas A Melton; David K Gifford; Rudolf Jaenisch; Richard A Young
Journal:  Cell       Date:  2006-04-21       Impact factor: 41.582

Review 5.  Chromatin modifications by methylation and ubiquitination: implications in the regulation of gene expression.

Authors:  Ali Shilatifard
Journal:  Annu Rev Biochem       Date:  2006       Impact factor: 23.643

6.  Direct interaction between DNMT1 and G9a coordinates DNA and histone methylation during replication.

Authors:  Pierre-Olivier Estève; Hang Gyeong Chin; Andrea Smallwood; George R Feehery; Omkaram Gangisetty; Adam R Karpf; Michael F Carey; Sriharsa Pradhan
Journal:  Genes Dev       Date:  2006-11-03       Impact factor: 11.361

7.  PTMs on H3 variants before chromatin assembly potentiate their final epigenetic state.

Authors:  Alejandra Loyola; Tiziana Bonaldi; Danièle Roche; Axel Imhof; Geneviève Almouzni
Journal:  Mol Cell       Date:  2006-10-20       Impact factor: 17.970

8.  Chemical derivatization of histones for facilitated analysis by mass spectrometry.

Authors:  Benjamin A Garcia; Sahana Mollah; Beatrix M Ueberheide; Scott A Busby; Tara L Muratore; Jeffrey Shabanowitz; Donald F Hunt
Journal:  Nat Protoc       Date:  2007       Impact factor: 13.491

9.  Cell cycle-dependent colocalization of BARD1 and BRCA1 proteins in discrete nuclear domains.

Authors:  Y Jin; X L Xu; M C Yang; F Wei; T C Ayi; A M Bowcock; R Baer
Journal:  Proc Natl Acad Sci U S A       Date:  1997-10-28       Impact factor: 11.205

10.  Genome-wide analysis of Polycomb targets in Drosophila melanogaster.

Authors:  Yuri B Schwartz; Tatyana G Kahn; David A Nix; Xiao-Yong Li; Richard Bourgon; Mark Biggin; Vincenzo Pirrotta
Journal:  Nat Genet       Date:  2006-05-28       Impact factor: 38.330

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  50 in total

1.  Origins and formation of histone methylation across the human cell cycle.

Authors:  Barry M Zee; Laura-Mae P Britton; Daniel Wolle; Devorah M Haberman; Benjamin A Garcia
Journal:  Mol Cell Biol       Date:  2012-04-30       Impact factor: 4.272

Review 2.  Histone variants on the move: substrates for chromatin dynamics.

Authors:  Paul B Talbert; Steven Henikoff
Journal:  Nat Rev Mol Cell Biol       Date:  2016-12-07       Impact factor: 94.444

3.  Causal role for inheritance of H3K27me3 in maintaining the OFF state of a Drosophila HOX gene.

Authors:  Rory T Coleman; Gary Struhl
Journal:  Science       Date:  2017-03-16       Impact factor: 47.728

Review 4.  Epigenetic inheritance mediated by histone lysine methylation: maintaining transcriptional states without the precise restoration of marks?

Authors:  Chang Huang; Mo Xu; Bing Zhu
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2013-01-05       Impact factor: 6.237

5.  Multivalent di-nucleosome recognition enables the Rpd3S histone deacetylase complex to tolerate decreased H3K36 methylation levels.

Authors:  Jae-Wan Huh; Jun Wu; Chul-Hwan Lee; Miyong Yun; Daniel Gilada; Chad A Brautigam; Bing Li
Journal:  EMBO J       Date:  2012-08-03       Impact factor: 11.598

6.  FBXO44 promotes DNA replication-coupled repetitive element silencing in cancer cells.

Authors:  Jia Z Shen; Zhixin Qiu; Qiulian Wu; Darren Finlay; Guillermina Garcia; Dahui Sun; Juha Rantala; William Barshop; Jennifer L Hope; Ryan C Gimple; Olle Sangfelt; Linda M Bradley; James Wohlschlegel; Jeremy N Rich; Charles Spruck
Journal:  Cell       Date:  2020-12-23       Impact factor: 41.582

Review 7.  Mechanisms of epigenetic memory and addiction.

Authors:  Luis M Tuesta; Yi Zhang
Journal:  EMBO J       Date:  2014-04-28       Impact factor: 11.598

8.  Increased H3K9 methylation and impaired expression of Protocadherins are associated with the cognitive dysfunctions of the Kleefstra syndrome.

Authors:  Giovanni Iacono; Aline Dubos; Hamid Méziane; Marco Benevento; Ehsan Habibi; Amit Mandoli; Fabrice Riet; Mohammed Selloum; Robert Feil; Huiqing Zhou; Tjitske Kleefstra; Nael Nadif Kasri; Hans van Bokhoven; Yann Herault; Hendrik G Stunnenberg
Journal:  Nucleic Acids Res       Date:  2018-06-01       Impact factor: 16.971

Review 9.  Epigenetics: the link between nature and nurture.

Authors:  Stephanie A Tammen; Simonetta Friso; Sang-Woon Choi
Journal:  Mol Aspects Med       Date:  2012-08-10

10.  Quantitative proteomics reveals that the specific methyltransferases Txr1p and Ezl2p differentially affect the mono-, di- and trimethylation states of histone H3 lysine 27 (H3K27).

Authors:  Chunchao Zhang; Anthony J Molascon; Shan Gao; Yifan Liu; Philip C Andrews
Journal:  Mol Cell Proteomics       Date:  2012-11-13       Impact factor: 5.911

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