Literature DB >> 20210311

Insights into heterocyclization from two highly similar enzymes.

John A McIntosh1, Mohamed S Donia, Eric W Schmidt.   

Abstract

The cyanobactin biosynthetic pathways pat and tru, isolated from metagenomes of marine animals, lead to diverse natural products containing heterocycles derived from Cys, Ser, and Thr. Previous work has shown that PatD and TruD are extremely broad-substrate heterocyclase enzymes. These enzymes are virtually identical in their N-terminal putative catalytic domains, but only approximately 77% identical in their C-terminal putative substrate-binding domains. Here, we show that these differences allow the enzymes to control regioselectivity of posttranslational modifications, helping to control product chemistry in this hypervariable family of marine natural products.

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Year:  2010        PMID: 20210311      PMCID: PMC2862276          DOI: 10.1021/ja9107116

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  15 in total

1.  Molecular biological access to the chemistry of unknown soil microbes: a new frontier for natural products.

Authors:  J Handelsman; M R Rondon; S F Brady; J Clardy; R M Goodman
Journal:  Chem Biol       Date:  1998-10

2.  From peptide precursors to oxazole and thiazole-containing peptide antibiotics: microcin B17 synthase.

Authors:  Y M Li; J C Milne; L L Madison; R Kolter; C T Walsh
Journal:  Science       Date:  1996-11-15       Impact factor: 47.728

3.  Characterization of uncultivated prokaryotes: isolation and analysis of a 40-kilobase-pair genome fragment from a planktonic marine archaeon.

Authors:  J L Stein; T L Marsh; K Y Wu; H Shizuya; E F DeLong
Journal:  J Bacteriol       Date:  1996-02       Impact factor: 3.490

4.  Patellamide A and C biosynthesis by a microcin-like pathway in Prochloron didemni, the cyanobacterial symbiont of Lissoclinum patella.

Authors:  Eric W Schmidt; James T Nelson; David A Rasko; Sebastian Sudek; Jonathan A Eisen; Margo G Haygood; Jacques Ravel
Journal:  Proc Natl Acad Sci U S A       Date:  2005-05-09       Impact factor: 11.205

5.  Synthesis and structural properties of patellamide A derivatives and their copper(II) compounds.

Authors:  Paul V Bernhardt; Peter Comba; David P Fairlie; Lawrence R Gahan; Graeme R Hanson; Lutz Lötzbeyer
Journal:  Chemistry       Date:  2002-04-02       Impact factor: 5.236

6.  Cofactor requirements and reconstitution of microcin B17 synthetase: a multienzyme complex that catalyzes the formation of oxazoles and thiazoles in the antibiotic microcin B17.

Authors:  J C Milne; R S Roy; A C Eliot; N L Kelleher; A Wokhlu; B Nickels; C T Walsh
Journal:  Biochemistry       Date:  1999-04-13       Impact factor: 3.162

7.  Small-subunit rRNA genes and in situ hybridization with oligonucleotides specific for the bacterial symbionts in the larvae of the bryozoan Bugula neritina and proposal of "Candidatus endobugula sertula".

Authors:  M G Haygood; S K Davidson
Journal:  Appl Environ Microbiol       Date:  1997-11       Impact factor: 4.792

8.  Using marine natural products to discover a protease that catalyzes peptide macrocyclization of diverse substrates.

Authors:  Jaeheon Lee; John McIntosh; Brian J Hathaway; Eric W Schmidt
Journal:  J Am Chem Soc       Date:  2009-02-18       Impact factor: 15.419

9.  Kinetics and regioselectivity of peptide-to-heterocycle conversions by microcin B17 synthetase.

Authors:  P J Belshaw; R S Roy; N L Kelleher; C T Walsh
Journal:  Chem Biol       Date:  1998-07

10.  Spontaneity in the patellamide biosynthetic pathway.

Authors:  Bruce F Milne; Paul F Long; Antonio Starcevic; Daslav Hranueli; Marcel Jaspars
Journal:  Org Biomol Chem       Date:  2006-01-09       Impact factor: 3.876

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  43 in total

1.  Selectivity, directionality, and promiscuity in peptide processing from a Bacillus sp. Al Hakam cyclodehydratase.

Authors:  Joel O Melby; Kyle L Dunbar; Nhat Q Trinh; Douglas A Mitchell
Journal:  J Am Chem Soc       Date:  2012-03-08       Impact factor: 15.419

2.  Linking chemistry and genetics in the growing cyanobactin natural products family.

Authors:  Mohamed S Donia; Eric W Schmidt
Journal:  Chem Biol       Date:  2011-04-22

3.  Metabolic model for diversity-generating biosynthesis.

Authors:  Ma Diarey Tianero; Elizabeth Pierce; Shrinivasan Raghuraman; Debosmita Sardar; John A McIntosh; John R Heemstra; Zachary Schonrock; Brett C Covington; J Alan Maschek; James E Cox; Brian O Bachmann; Baldomero M Olivera; Duane E Ruffner; Eric W Schmidt
Journal:  Proc Natl Acad Sci U S A       Date:  2016-02-01       Impact factor: 11.205

4.  Post-Translational Tyrosine Geranylation in Cyanobactin Biosynthesis.

Authors:  Maho Morita; Yue Hao; Jouni K Jokela; Debosmita Sardar; Zhenjian Lin; Kaarina Sivonen; Satish K Nair; Eric W Schmidt
Journal:  J Am Chem Soc       Date:  2018-05-01       Impact factor: 15.419

5.  Directing Biosynthesis: Practical Supply of Natural and Unnatural Cyanobactins.

Authors:  D Sardar; M D Tianero; E W Schmidt
Journal:  Methods Enzymol       Date:  2016-03-16       Impact factor: 1.600

Review 6.  Life in cellulose houses: symbiotic bacterial biosynthesis of ascidian drugs and drug leads.

Authors:  Eric W Schmidt; Mohamed S Donia
Journal:  Curr Opin Biotechnol       Date:  2010-11-01       Impact factor: 9.740

7.  Enzymatic basis of ribosomal peptide prenylation in cyanobacteria.

Authors:  John A McIntosh; Mohamed S Donia; Satish K Nair; Eric W Schmidt
Journal:  J Am Chem Soc       Date:  2011-08-04       Impact factor: 15.419

8.  Ribosomal route to small-molecule diversity.

Authors:  Ma Diarey B Tianero; Mohamed S Donia; Travis S Young; Peter G Schultz; Eric W Schmidt
Journal:  J Am Chem Soc       Date:  2011-12-22       Impact factor: 15.419

9.  Orchestration of enzymatic processing by thiazole/oxazole-modified microcin dehydrogenases.

Authors:  Joel O Melby; Xiangpo Li; Douglas A Mitchell
Journal:  Biochemistry       Date:  2014-01-07       Impact factor: 3.162

Review 10.  Revealing nature's synthetic potential through the study of ribosomal natural product biosynthesis.

Authors:  Kyle L Dunbar; Douglas A Mitchell
Journal:  ACS Chem Biol       Date:  2013-01-08       Impact factor: 5.100

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