Literature DB >> 19166292

Using marine natural products to discover a protease that catalyzes peptide macrocyclization of diverse substrates.

Jaeheon Lee1, John McIntosh, Brian J Hathaway, Eric W Schmidt.   

Abstract

Small N-C terminally cyclic ribosomal peptides are common in nature, yet the mechanisms underlying their biosyntheses remain largely unknown. We recently identified candidate peptide cyclase genes in the metagenomes of marine animals. Here we report that PatG, a protease discovered in this analysis, cleaves variables, short peptides out of a precursor protein, and cyclizes these peptides in vivo and in vitro.

Entities:  

Mesh:

Substances:

Year:  2009        PMID: 19166292      PMCID: PMC2645028          DOI: 10.1021/ja8092168

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  14 in total

1.  Production of cyclic peptides and proteins in vivo.

Authors:  C P Scott; E Abel-Santos; M Wall; D C Wahnon; S J Benkovic
Journal:  Proc Natl Acad Sci U S A       Date:  1999-11-23       Impact factor: 11.205

Review 2.  Circular proteins--no end in sight.

Authors:  Manuela Trabi; David J Craik
Journal:  Trends Biochem Sci       Date:  2002-03       Impact factor: 13.807

3.  Enzymatic cyclization of a potent bowman-birk protease inhibitor, sunflower trypsin inhibitor-1, and solution structure of an acyclic precursor peptide.

Authors:  Ute C Marx; Michael L J Korsinczky; Horst Joachim Schirra; Alun Jones; Barrie Condie; Laszlo Otvos; David J Craik
Journal:  J Biol Chem       Date:  2003-03-05       Impact factor: 5.157

4.  Structure of trichamide, a cyclic peptide from the bloom-forming cyanobacterium Trichodesmium erythraeum, predicted from the genome sequence.

Authors:  Sebastian Sudek; Margo G Haygood; Diaa T A Youssef; Eric W Schmidt
Journal:  Appl Environ Microbiol       Date:  2006-06       Impact factor: 4.792

5.  Evolution of prokaryotic subtilases: genome-wide analysis reveals novel subfamilies with different catalytic residues.

Authors:  Roland J Siezen; Bernadet Renckens; Jos Boekhorst
Journal:  Proteins       Date:  2007-05-15

Review 6.  Development of eptifibatide.

Authors:  R M Scarborough
Journal:  Am Heart J       Date:  1999-12       Impact factor: 4.749

7.  Patellamide A and C biosynthesis by a microcin-like pathway in Prochloron didemni, the cyanobacterial symbiont of Lissoclinum patella.

Authors:  Eric W Schmidt; James T Nelson; David A Rasko; Sebastian Sudek; Jonathan A Eisen; Margo G Haygood; Jacques Ravel
Journal:  Proc Natl Acad Sci U S A       Date:  2005-05-09       Impact factor: 11.205

8.  Maturation of IncP pilin precursors resembles the catalytic Dyad-like mechanism of leader peptidases.

Authors:  R Eisenbrandt; M Kalkum; R Lurz; E Lanka
Journal:  J Bacteriol       Date:  2000-12       Impact factor: 3.490

9.  Natural combinatorial peptide libraries in cyanobacterial symbionts of marine ascidians.

Authors:  Mohamed S Donia; Brian J Hathaway; Sebastian Sudek; Margo G Haygood; M J Rosovitz; Jacques Ravel; Eric W Schmidt
Journal:  Nat Chem Biol       Date:  2006-11-05       Impact factor: 15.040

10.  A global assembly line for cyanobactins.

Authors:  Mohamed S Donia; Jacques Ravel; Eric W Schmidt
Journal:  Nat Chem Biol       Date:  2008-04-20       Impact factor: 15.040

View more
  69 in total

1.  Linking chemistry and genetics in the growing cyanobactin natural products family.

Authors:  Mohamed S Donia; Eric W Schmidt
Journal:  Chem Biol       Date:  2011-04-22

2.  Metabolic model for diversity-generating biosynthesis.

Authors:  Ma Diarey Tianero; Elizabeth Pierce; Shrinivasan Raghuraman; Debosmita Sardar; John A McIntosh; John R Heemstra; Zachary Schonrock; Brett C Covington; J Alan Maschek; James E Cox; Brian O Bachmann; Baldomero M Olivera; Duane E Ruffner; Eric W Schmidt
Journal:  Proc Natl Acad Sci U S A       Date:  2016-02-01       Impact factor: 11.205

3.  Progress toward sourcing plants for new bioconjugation tools: a screening evaluation of a model peptide ligase using a synthetic precursor.

Authors:  Tunjung Mahatmanto; Isyatul Azizah; Alex Buchberger; Nicholas Stephanopoulos
Journal:  3 Biotech       Date:  2019-11-09       Impact factor: 2.406

4.  Post-Translational Tyrosine Geranylation in Cyanobactin Biosynthesis.

Authors:  Maho Morita; Yue Hao; Jouni K Jokela; Debosmita Sardar; Zhenjian Lin; Kaarina Sivonen; Satish K Nair; Eric W Schmidt
Journal:  J Am Chem Soc       Date:  2018-05-01       Impact factor: 15.419

Review 5.  Metagenomic approaches to natural products from free-living and symbiotic organisms.

Authors:  Sean F Brady; Luke Simmons; Jeffrey H Kim; Eric W Schmidt
Journal:  Nat Prod Rep       Date:  2009-09-16       Impact factor: 13.423

Review 6.  Various mechanisms in cyclopeptide production from precursors synthesized independently of non-ribosomal peptide synthetases.

Authors:  Wenyan Xu; Liling Li; Liangcheng Du; Ninghua Tan
Journal:  Acta Biochim Biophys Sin (Shanghai)       Date:  2011-07-14       Impact factor: 3.848

7.  Characterization of the macrocyclase involved in the biosynthesis of RiPP cyclic peptides in plants.

Authors:  Jonathan R Chekan; Paola Estrada; Patrick S Covello; Satish K Nair
Journal:  Proc Natl Acad Sci U S A       Date:  2017-06-05       Impact factor: 11.205

8.  Peptide macrocyclization catalyzed by a prolyl oligopeptidase involved in α-amanitin biosynthesis.

Authors:  Hong Luo; Sung-Yong Hong; R Michael Sgambelluri; Evan Angelos; Xuan Li; Jonathan D Walton
Journal:  Chem Biol       Date:  2014-12-04

Review 9.  Biosynthetic Proteases That Catalyze the Macrocyclization of Ribosomally Synthesized Linear Peptides.

Authors:  Chayanid Ongpipattanakul; Satish K Nair
Journal:  Biochemistry       Date:  2018-03-27       Impact factor: 3.162

Review 10.  Cyanobactins-ribosomal cyclic peptides produced by cyanobacteria.

Authors:  Kaarina Sivonen; Niina Leikoski; David P Fewer; Jouni Jokela
Journal:  Appl Microbiol Biotechnol       Date:  2010-02-27       Impact factor: 4.813

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.