Literature DB >> 20036541

The transcription elongation factor NusA is required for stress-induced mutagenesis in Escherichia coli.

Susan E Cohen1, Graham C Walker.   

Abstract

Stress-induced mutagenesis describes the accumulation of mutations that occur in nongrowing cells, in contrast to mutagenesis that occurs in actively dividing populations, and has been referred to as stationary-phase or adaptive mutagenesis. The most widely studied system for stress-induced mutagenesis involves monitoring the appearance of Lac(+) revertants of the strain FC40 under starvation conditions in Escherichia coli. The SOS-inducible translesion DNA polymerase DinB plays an important role in this phenomenon. Loss of DinB (DNA pol IV) function results in a severe reduction of Lac(+) revertants. We previously reported that NusA, an essential component of elongating RNA polymerases, interacts with DinB. Here we report our unexpected observation that wild-type NusA function is required for stress-induced mutagenesis. We present evidence that this effect is unlikely to be due to defects in transcription of lac genes but rather is due to an inability to adapt and mutate in response to environmental stress. Furthermore, we extended our analysis to the formation of stress-induced mutants in response to antibiotic treatment, observing the same striking abolition of mutagenesis under entirely different conditions. Our results are the first to implicate NusA as a crucial participant in the phenomenon of stress-induced mutagenesis. Copyright 2010 Elsevier Ltd. All rights reserved.

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Year:  2009        PMID: 20036541      PMCID: PMC2822047          DOI: 10.1016/j.cub.2009.11.039

Source DB:  PubMed          Journal:  Curr Biol        ISSN: 0960-9822            Impact factor:   10.834


  37 in total

1.  Some features of the mutability of bacteria during nonlethal selection.

Authors:  V G Godoy; F S Gizatullin; M S Fox
Journal:  Genetics       Date:  2000-01       Impact factor: 4.562

Review 2.  Evolving responsively: adaptive mutation.

Authors:  S M Rosenberg
Journal:  Nat Rev Genet       Date:  2001-07       Impact factor: 53.242

3.  The Y-family of DNA polymerases.

Authors:  H Ohmori; E C Friedberg; R P Fuchs; M F Goodman; F Hanaoka; D Hinkle; T A Kunkel; C W Lawrence; Z Livneh; T Nohmi; L Prakash; S Prakash; T Todo; G C Walker; Z Wang; R Woodgate
Journal:  Mol Cell       Date:  2001-07       Impact factor: 17.970

Review 4.  Adaptive mutation in Escherichia coli.

Authors:  P L Foster
Journal:  Cold Spring Harb Symp Quant Biol       Date:  2000

5.  Error-prone DNA polymerase IV is controlled by the stress-response sigma factor, RpoS, in Escherichia coli.

Authors:  Jill C Layton; Patricia L Foster
Journal:  Mol Microbiol       Date:  2003-10       Impact factor: 3.501

6.  DinB upregulation is the sole role of the SOS response in stress-induced mutagenesis in Escherichia coli.

Authors:  Rodrigo S Galhardo; Robert Do; Masami Yamada; Errol C Friedberg; P J Hastings; Takehiko Nohmi; Susan M Rosenberg
Journal:  Genetics       Date:  2009-03-06       Impact factor: 4.562

7.  Roles of chromosomal and episomal dinB genes encoding DNA pol IV in targeted and untargeted mutagenesis in Escherichia coli.

Authors:  S R Kim; K Matsui; M Yamada; P Gruz; T Nohmi
Journal:  Mol Genet Genomics       Date:  2001-10       Impact factor: 3.291

8.  SOS mutator DNA polymerase IV functions in adaptive mutation and not adaptive amplification.

Authors:  G J McKenzie; P L Lee; M J Lombardo; P J Hastings; S M Rosenberg
Journal:  Mol Cell       Date:  2001-03       Impact factor: 17.970

9.  Fidelity and processivity of DNA synthesis by DNA polymerase kappa, the product of the human DINB1 gene.

Authors:  E Ohashi; K Bebenek; T Matsuda; W J Feaver; V L Gerlach; E C Friedberg; H Ohmori; T A Kunkel
Journal:  J Biol Chem       Date:  2000-12-15       Impact factor: 5.157

10.  Amplification-mutagenesis: evidence that "directed" adaptive mutation and general hypermutability result from growth with a selected gene amplification.

Authors:  Heather Hendrickson; E Susan Slechta; Ulfar Bergthorsson; Dan I Andersson; John R Roth
Journal:  Proc Natl Acad Sci U S A       Date:  2002-02-05       Impact factor: 11.205

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  38 in total

1.  Transcriptional de-repression and Mfd are mutagenic in stressed Bacillus subtilis cells.

Authors:  Holly Anne Martin; Mario Pedraza-Reyes; Ronald E Yasbin; Eduardo A Robleto
Journal:  J Mol Microbiol Biotechnol       Date:  2012-01-13

2.  Linking transcription with DNA repair, damage tolerance, and genome duplication.

Authors:  Peter McGlynn
Journal:  Proc Natl Acad Sci U S A       Date:  2010-08-23       Impact factor: 11.205

3.  Separate DNA Pol II- and Pol IV-dependent pathways of stress-induced mutation during double-strand-break repair in Escherichia coli are controlled by RpoS.

Authors:  Ryan L Frisch; Yang Su; P C Thornton; Janet L Gibson; Susan M Rosenberg; P J Hastings
Journal:  J Bacteriol       Date:  2010-07-16       Impact factor: 3.490

4.  Transcription-associated mutation in Bacillus subtilis cells under stress.

Authors:  Christine Pybus; Mario Pedraza-Reyes; Christian A Ross; Holly Martin; Katherine Ona; Ronald E Yasbin; Eduardo Robleto
Journal:  J Bacteriol       Date:  2010-04-30       Impact factor: 3.490

5.  RpoS, the stress response sigma factor, plays a dual role in the regulation of Escherichia coli's error-prone DNA polymerase IV.

Authors:  Kimberly A M Storvik; Patricia L Foster
Journal:  J Bacteriol       Date:  2010-05-14       Impact factor: 3.490

6.  The SMC-like protein complex SbcCD enhances DNA polymerase IV-dependent spontaneous mutation in Escherichia coli.

Authors:  Kimberly A M Storvik; Patricia L Foster
Journal:  J Bacteriol       Date:  2010-12-03       Impact factor: 3.490

7.  Ugp and PitA participate in the selection of PHO-constitutive mutants.

Authors:  Henrique Iglesias Neves; Tuanny Fernanda Pereira; Ezra Yagil; Beny Spira
Journal:  J Bacteriol       Date:  2015-02-02       Impact factor: 3.490

Review 8.  New discoveries linking transcription to DNA repair and damage tolerance pathways.

Authors:  Susan E Cohen; Graham C Walker
Journal:  Transcription       Date:  2011 Jan-Feb

Review 9.  Hypermutation and stress adaptation in bacteria.

Authors:  R Jayaraman
Journal:  J Genet       Date:  2011-08       Impact factor: 1.166

10.  Compromised factor-dependent transcription termination in a nusA mutant of Escherichia coli: spectrum of termination efficiencies generated by perturbations of Rho, NusG, NusA, and H-NS family proteins.

Authors:  Shivalika Saxena; J Gowrishankar
Journal:  J Bacteriol       Date:  2011-05-20       Impact factor: 3.490

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