Literature DB >> 11006276

Fidelity and processivity of DNA synthesis by DNA polymerase kappa, the product of the human DINB1 gene.

E Ohashi1, K Bebenek, T Matsuda, W J Feaver, V L Gerlach, E C Friedberg, H Ohmori, T A Kunkel.   

Abstract

Mammalian DNA polymerase kappa (pol kappa), a member of the UmuC/DinB nucleotidyl transferase superfamily, has been implicated in spontaneous mutagenesis. Here we show that human pol kappa copies undamaged DNA with average single-base substitution and deletion error rates of 7 x 10(-3) and 2 x 10(-3), respectively. These error rates are high when compared to those of most other DNA polymerases. pol kappa also has unusual error specificity, producing a high proportion of T.CMP mispairs and deleting and adding non-reiterated nucleotides at extraordinary rates. Unlike other members of the UmuC/DinB family, pol kappa can processively synthesize chains of 25 or more nucleotides. This moderate processivity may reflect a contribution of C-terminal residues, which include two zinc clusters. The very low fidelity and moderate processivity of pol kappa is novel in comparison to any previously studied DNA polymerase, and is consistent with a role in spontaneous mutagenesis.

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Year:  2000        PMID: 11006276     DOI: 10.1074/jbc.M005309200

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  79 in total

1.  Sulfolobus solfataricus P2 DNA polymerase IV (Dpo4): an archaeal DinB-like DNA polymerase with lesion-bypass properties akin to eukaryotic poleta.

Authors:  F Boudsocq; S Iwai; F Hanaoka; R Woodgate
Journal:  Nucleic Acids Res       Date:  2001-11-15       Impact factor: 16.971

Review 2.  Managing DNA polymerases: coordinating DNA replication, DNA repair, and DNA recombination.

Authors:  M D Sutton; G C Walker
Journal:  Proc Natl Acad Sci U S A       Date:  2001-07-17       Impact factor: 11.205

3.  Human DNA polymerase iota utilizes different nucleotide incorporation mechanisms dependent upon the template base.

Authors:  M Todd Washington; Robert E Johnson; Louise Prakash; Satya Prakash
Journal:  Mol Cell Biol       Date:  2004-01       Impact factor: 4.272

4.  Checkpoint activation regulates mutagenic translesion synthesis.

Authors:  Mihoko Kai; Teresa S-F Wang
Journal:  Genes Dev       Date:  2003-01-01       Impact factor: 11.361

5.  Structural basis for recruitment of translesion DNA polymerase Pol IV/DinB to the beta-clamp.

Authors:  Karen A Bunting; S Mark Roe; Laurence H Pearl
Journal:  EMBO J       Date:  2003-11-03       Impact factor: 11.598

6.  UmuD(2) inhibits a non-covalent step during DinB-mediated template slippage on homopolymeric nucleotide runs.

Authors:  James J Foti; Angela M Delucia; Catherine M Joyce; Graham C Walker
Journal:  J Biol Chem       Date:  2010-05-13       Impact factor: 5.157

7.  Bypass of N²-ethylguanine by human DNA polymerase κ.

Authors:  Matthew G Pence; Patrick Blans; Charles N Zink; James C Fishbein; Fred W Perrino
Journal:  DNA Repair (Amst)       Date:  2010-10-16

8.  Molecular dissection of the domain architecture and catalytic activities of human PrimPol.

Authors:  Benjamin A Keen; Stanislaw K Jozwiakowski; Laura J Bailey; Julie Bianchi; Aidan J Doherty
Journal:  Nucleic Acids Res       Date:  2014-03-20       Impact factor: 16.971

9.  Mutator alleles of yeast DNA polymerase zeta.

Authors:  Ayako N Sakamoto; Jana E Stone; Grace E Kissling; Scott D McCulloch; Youri I Pavlov; Thomas A Kunkel
Journal:  DNA Repair (Amst)       Date:  2007-08-21

10.  Biochemical analysis of active site mutations of human polymerase η.

Authors:  Samuel C Suarez; Renee A Beardslee; Shannon M Toffton; Scott D McCulloch
Journal:  Mutat Res       Date:  2013-03-13       Impact factor: 2.433

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