Literature DB >> 19270270

DinB upregulation is the sole role of the SOS response in stress-induced mutagenesis in Escherichia coli.

Rodrigo S Galhardo1, Robert Do, Masami Yamada, Errol C Friedberg, P J Hastings, Takehiko Nohmi, Susan M Rosenberg.   

Abstract

Stress-induced mutagenesis is a collection of mechanisms observed in bacterial, yeast, and human cells in which adverse conditions provoke mutagenesis, often under the control of stress responses. Control of mutagenesis by stress responses may accelerate evolution specifically when cells are maladapted to their environments, i.e., are stressed. It is therefore important to understand how stress responses increase mutagenesis. In the Escherichia coli Lac assay, stress-induced point mutagenesis requires induction of at least two stress responses: the RpoS-controlled general/starvation stress response and the SOS DNA-damage response, both of which upregulate DinB error-prone DNA polymerase, among other genes required for Lac mutagenesis. We show that upregulation of DinB is the only aspect of the SOS response needed for stress-induced mutagenesis. We constructed two dinB(o(c)) (operator-constitutive) mutants. Both produce SOS-induced levels of DinB constitutively. We find that both dinB(o(c)) alleles fully suppress the phenotype of constitutively SOS-"off" lexA(Ind(-)) mutant cells, restoring normal levels of stress-induced mutagenesis. Thus, dinB is the only SOS gene required at induced levels for stress-induced point mutagenesis. Furthermore, although spontaneous SOS induction has been observed to occur in only a small fraction of cells, upregulation of dinB by the dinB(o(c)) alleles in all cells does not promote a further increase in mutagenesis, implying that SOS induction of DinB, although necessary, is insufficient to differentiate cells into a hypermutable condition.

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Year:  2009        PMID: 19270270      PMCID: PMC2674841          DOI: 10.1534/genetics.109.100735

Source DB:  PubMed          Journal:  Genetics        ISSN: 0016-6731            Impact factor:   4.562


  69 in total

1.  The role of transient hypermutators in adaptive mutation in Escherichia coli.

Authors:  W A Rosche; P L Foster
Journal:  Proc Natl Acad Sci U S A       Date:  1999-06-08       Impact factor: 11.205

2.  Hypermutation in derepressed operons of Escherichia coli K12.

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Journal:  Proc Natl Acad Sci U S A       Date:  1999-04-27       Impact factor: 11.205

3.  UmuD and RecA directly modulate the mutagenic potential of the Y family DNA polymerase DinB.

Authors:  Veronica G Godoy; Daniel F Jarosz; Sharotka M Simon; Alexej Abyzov; Valentin Ilyin; Graham C Walker
Journal:  Mol Cell       Date:  2007-12-28       Impact factor: 17.970

4.  Spontaneous mutagenesis is elevated in protease-defective cells.

Authors:  Abu Amar M Al Mamun; M Zafri Humayun
Journal:  Mol Microbiol       Date:  2008-11-24       Impact factor: 3.501

5.  A DNA damage response in Escherichia coli involving the alternative sigma factor, RpoS.

Authors:  Houra Merrikh; Alexander E Ferrazzoli; Alexandre Bougdour; Anique Olivier-Mason; Susan T Lovett
Journal:  Proc Natl Acad Sci U S A       Date:  2009-01-05       Impact factor: 11.205

Review 6.  Transient and heritable mutators in adaptive evolution in the lab and in nature.

Authors:  S M Rosenberg; C Thulin; R S Harris
Journal:  Genetics       Date:  1998-04       Impact factor: 4.562

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Authors:  S M Rosenberg; S Longerich; P Gee; R S Harris
Journal:  Science       Date:  1994-07-15       Impact factor: 47.728

8.  Multiple pathways for SOS-induced mutagenesis in Escherichia coli: an overexpression of dinB/dinP results in strongly enhancing mutagenesis in the absence of any exogenous treatment to damage DNA.

Authors:  S R Kim; G Maenhaut-Michel; M Yamada; Y Yamamoto; K Matsui; T Sofuni; T Nohmi; H Ohmori
Journal:  Proc Natl Acad Sci U S A       Date:  1997-12-09       Impact factor: 11.205

9.  Genetic analysis of mutagenesis in aging Escherichia coli colonies.

Authors:  F Taddei; J A Halliday; I Matic; M Radman
Journal:  Mol Gen Genet       Date:  1997-10

Review 10.  Mutation as a stress response and the regulation of evolvability.

Authors:  Rodrigo S Galhardo; P J Hastings; Susan M Rosenberg
Journal:  Crit Rev Biochem Mol Biol       Date:  2007 Sep-Oct       Impact factor: 8.250

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  63 in total

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2.  Transcriptional de-repression and Mfd are mutagenic in stressed Bacillus subtilis cells.

Authors:  Holly Anne Martin; Mario Pedraza-Reyes; Ronald E Yasbin; Eduardo A Robleto
Journal:  J Mol Microbiol Biotechnol       Date:  2012-01-13

Review 3.  Stress-induced modulators of repeat instability and genome evolution.

Authors:  Natalie C Fonville; R Matthew Ward; David Mittelman
Journal:  J Mol Microbiol Biotechnol       Date:  2012-01-13

4.  Separate DNA Pol II- and Pol IV-dependent pathways of stress-induced mutation during double-strand-break repair in Escherichia coli are controlled by RpoS.

Authors:  Ryan L Frisch; Yang Su; P C Thornton; Janet L Gibson; Susan M Rosenberg; P J Hastings
Journal:  J Bacteriol       Date:  2010-07-16       Impact factor: 3.490

5.  Divergent roles for the two PolI-like organelle DNA polymerases of Arabidopsis.

Authors:  Jean-Sébastien Parent; Etienne Lepage; Normand Brisson
Journal:  Plant Physiol       Date:  2011-03-22       Impact factor: 8.340

6.  DNA polymerases are error-prone at RecA-mediated recombination intermediates.

Authors:  Richard T Pomerantz; Myron F Goodman; Michael E O'Donnell
Journal:  Cell Cycle       Date:  2013-07-29       Impact factor: 4.534

7.  An SOS-regulated type 2 toxin-antitoxin system.

Authors:  Larissa A Singletary; Janet L Gibson; Elizabeth J Tanner; Gregory J McKenzie; Peter L Lee; Caleb Gonzalez; Susan M Rosenberg
Journal:  J Bacteriol       Date:  2009-10-16       Impact factor: 3.490

8.  Selection-Enhanced Mutagenesis of lac Genes Is Due to Their Coamplification with dinB Encoding an Error-Prone DNA Polymerase.

Authors:  Itsugo Yamayoshi; Sophie Maisnier-Patin; John R Roth
Journal:  Genetics       Date:  2018-01-04       Impact factor: 4.562

9.  Stress-Induced Mutagenesis: Implications in Cancer and Drug Resistance.

Authors:  Devon M Fitzgerald; P J Hastings; Susan M Rosenberg
Journal:  Annu Rev Cancer Biol       Date:  2017-03

10.  Yeast Spontaneous Mutation Rate and Spectrum Vary with Environment.

Authors:  Haoxuan Liu; Jianzhi Zhang
Journal:  Curr Biol       Date:  2019-05-02       Impact factor: 10.834

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