Literature DB >> 20639336

Separate DNA Pol II- and Pol IV-dependent pathways of stress-induced mutation during double-strand-break repair in Escherichia coli are controlled by RpoS.

Ryan L Frisch1, Yang Su, P C Thornton, Janet L Gibson, Susan M Rosenberg, P J Hastings.   

Abstract

Previous work showed that about 85% of stress-induced mutations associated with DNA double-strand break repair in carbon-starved Escherichia coli result from error-prone DNA polymerase IV (Pol IV) (DinB) and that the mutagenesis is controlled by the RpoS stress response, which upregulates dinB. We report that the remaining mutagenesis requires high-fidelity Pol II, and that this component also requires RpoS. The results identify a second DNA polymerase contributing to stress-induced mutagenesis and show that RpoS promotes mutagenesis by more than the simple upregulation of dinB.

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Year:  2010        PMID: 20639336      PMCID: PMC2937414          DOI: 10.1128/JB.00570-10

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  49 in total

1.  A switch from high-fidelity to error-prone DNA double-strand break repair underlies stress-induced mutation.

Authors:  Rebecca G Ponder; Natalie C Fonville; Susan M Rosenberg
Journal:  Mol Cell       Date:  2005-09-16       Impact factor: 17.970

2.  Proofreading-defective DNA polymerase II increases adaptive mutation in Escherichia coli.

Authors:  P L Foster; G Gudmundsson; J M Trimarchi; H Cai; M F Goodman
Journal:  Proc Natl Acad Sci U S A       Date:  1995-08-15       Impact factor: 11.205

3.  Opposing roles of the holliday junction processing systems of Escherichia coli in recombination-dependent adaptive mutation.

Authors:  R S Harris; K J Ross; S M Rosenberg
Journal:  Genetics       Date:  1996-03       Impact factor: 4.562

Review 4.  Molecular handles on adaptive mutation.

Authors:  S M Rosenberg; R S Harris; J Torkelson
Journal:  Mol Microbiol       Date:  1995-10       Impact factor: 3.501

5.  Genome-wide hypermutation in a subpopulation of stationary-phase cells underlies recombination-dependent adaptive mutation.

Authors:  J Torkelson; R S Harris; M J Lombardo; J Nagendran; C Thulin; S M Rosenberg
Journal:  EMBO J       Date:  1997-06-02       Impact factor: 11.598

6.  Two enzymes, both of which process recombination intermediates, have opposite effects on adaptive mutation in Escherichia coli.

Authors:  P L Foster; J M Trimarchi; R A Maurer
Journal:  Genetics       Date:  1996-01       Impact factor: 4.562

7.  DNA polymerase II as a fidelity factor in chromosomal DNA synthesis in Escherichia coli.

Authors:  Magdalena Banach-Orlowska; Iwona J Fijalkowska; Roel M Schaaper; Piotr Jonczyk
Journal:  Mol Microbiol       Date:  2005-10       Impact factor: 3.501

8.  Comparative gene expression profiles following UV exposure in wild-type and SOS-deficient Escherichia coli.

Authors:  J Courcelle; A Khodursky; B Peter; P O Brown; P C Hanawalt
Journal:  Genetics       Date:  2001-05       Impact factor: 4.562

9.  Multiple pathways for SOS-induced mutagenesis in Escherichia coli: an overexpression of dinB/dinP results in strongly enhancing mutagenesis in the absence of any exogenous treatment to damage DNA.

Authors:  S R Kim; G Maenhaut-Michel; M Yamada; Y Yamamoto; K Matsui; T Sofuni; T Nohmi; H Ohmori
Journal:  Proc Natl Acad Sci U S A       Date:  1997-12-09       Impact factor: 11.205

10.  Adaptive amplification and point mutation are independent mechanisms: evidence for various stress-inducible mutation mechanisms.

Authors:  P J Hastings; Andrew Slack; Joseph F Petrosino; Susan M Rosenberg
Journal:  PLoS Biol       Date:  2004-11-23       Impact factor: 8.029

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  26 in total

Review 1.  Stress-induced modulators of repeat instability and genome evolution.

Authors:  Natalie C Fonville; R Matthew Ward; David Mittelman
Journal:  J Mol Microbiol Biotechnol       Date:  2012-01-13

2.  DNA polymerases are error-prone at RecA-mediated recombination intermediates.

Authors:  Richard T Pomerantz; Myron F Goodman; Michael E O'Donnell
Journal:  Cell Cycle       Date:  2013-07-29       Impact factor: 4.534

Review 3.  Hypermutation and stress adaptation in bacteria.

Authors:  R Jayaraman
Journal:  J Genet       Date:  2011-08       Impact factor: 1.166

Review 4.  Phenotypic heterogeneity in a bacteriophage population only appears as stress-induced mutagenesis.

Authors:  Ido Yosef; Rotem Edgar; Udi Qimron
Journal:  Curr Genet       Date:  2016-04-28       Impact factor: 3.886

5.  What limits the efficiency of double-strand break-dependent stress-induced mutation in Escherichia coli?

Authors:  Chandan Shee; Rebecca Ponder; Janet L Gibson; Susan M Rosenberg
Journal:  J Mol Microbiol Biotechnol       Date:  2012-01-13

Review 6.  Translesion DNA polymerases.

Authors:  Myron F Goodman; Roger Woodgate
Journal:  Cold Spring Harb Perspect Biol       Date:  2013-10-01       Impact factor: 10.005

7.  Impact of a stress-inducible switch to mutagenic repair of DNA breaks on mutation in Escherichia coli.

Authors:  Chandan Shee; Janet L Gibson; Michele C Darrow; Caleb Gonzalez; Susan M Rosenberg
Journal:  Proc Natl Acad Sci U S A       Date:  2011-08-01       Impact factor: 11.205

8.  Bacteria-to-Human Protein Networks Reveal Origins of Endogenous DNA Damage.

Authors:  Jun Xia; Li-Ya Chiu; Ralf B Nehring; María Angélica Bravo Núñez; Qian Mei; Mercedes Perez; Yin Zhai; Devon M Fitzgerald; John P Pribis; Yumeng Wang; Chenyue W Hu; Reid T Powell; Sandra A LaBonte; Ali Jalali; Meztli L Matadamas Guzmán; Alfred M Lentzsch; Adam T Szafran; Mohan C Joshi; Megan Richters; Janet L Gibson; Ryan L Frisch; P J Hastings; David Bates; Christine Queitsch; Susan G Hilsenbeck; Cristian Coarfa; James C Hu; Deborah A Siegele; Kenneth L Scott; Han Liang; Michael A Mancini; Christophe Herman; Kyle M Miller; Susan M Rosenberg
Journal:  Cell       Date:  2019-01-10       Impact factor: 41.582

9.  Antibiotic-induced DNA damage results in a controlled loss of pH homeostasis and genome instability.

Authors:  James Alexander Booth; Mário Špírek; Tekle Airgecho Lobie; Kirsten Skarstad; Lumir Krejci; Magnar Bjørås
Journal:  Sci Rep       Date:  2020-11-10       Impact factor: 4.379

10.  Stress-Induced Mutagenesis: Implications in Cancer and Drug Resistance.

Authors:  Devon M Fitzgerald; P J Hastings; Susan M Rosenberg
Journal:  Annu Rev Cancer Biol       Date:  2017-03
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