Literature DB >> 19924262

A Novel 5'-Iodonucleoside Allows Efficient Nonenzymatic Ligation of Single-stranded and Duplex DNAs.

Yanzheng Xu1, Eric T Kool.   

Abstract

A new iodothymidine phosphoramidite enables the placement of a 5'-iodide into oligonucleotides; the iodide is stable to ammonia deprotection and allows nonenzymatic ligations of DNA.

Entities:  

Year:  1997        PMID： 19924262      PMCID： PMC2778307          DOI： 10.1016/S0040-4039(97)01266-5

Source DB:  PubMed          Journal:  Tetrahedron Lett        ISSN： 0040-4039            Impact factor:   2.415


  11 in total

1.  Relative stabilities of triple helices composed of combinations of DNA, RNA and 2'-O-methyl-RNA backbones: chimeric circular oligonucleotides as probes.

Authors:  S Wang; E T Kool
Journal:  Nucleic Acids Res       Date:  1995-04-11       Impact factor: 16.971

2.  Regulation of inter- and intramolecular ligation with T4 DNA ligase in the presence of polyethylene glycol.

Authors:  K Hayashi; M Nakazawa; Y Ishizaki; N Hiraoka; A Obayashi
Journal:  Nucleic Acids Res       Date:  1986-10-10       Impact factor: 16.971

3.  Chemical synthesis of oligodeoxynucleotide dumbbells.

Authors:  G W Ashley; D M Kushlan
Journal:  Biochemistry       Date:  1991-03-19       Impact factor: 3.162

4.  The use of BrCN for assembling modified DNA duplexes and DNA-RNA hybrids; comparison with water-soluble carbodiimide.

Authors:  N G Dolinnaya; N I Sokolova; D T Ashirbekova; Z A Shabarova
Journal:  Nucleic Acids Res       Date:  1991-06-11       Impact factor: 16.971

5.  The chemical end-ligation of homopyrimidine oligodeoxyribonucleotides within a DNA triple helix.

Authors:  T Li; D S Weinstein; K Nicolaou
Journal:  Chem Biol       Date:  1997-03

6.  Template controlled coupling and recombination of oligonucleotide blocks containing thiophosphoryl groups.

Authors:  S M Gryaznov; R L Letsinger
Journal:  Nucleic Acids Res       Date:  1993-03-25       Impact factor: 16.971

7.  Halo sugar nucleosides. I. Iodination of the primary hydroxyl groups of nucleosides with methyltriphenoxyphosphonium iodide.

Authors:  J P Verheyden; J G Moffatt
Journal:  J Org Chem       Date:  1970-07       Impact factor: 4.354

8.  Specificity of the nick-closing activity of bacteriophage T4 DNA ligase.

Authors:  D Y Wu; R B Wallace
Journal:  Gene       Date:  1989       Impact factor: 3.688

9.  Oligonucleotide-directed mutagenesis using M13-derived vectors: an efficient and general procedure for the production of point mutations in any fragment of DNA.

Authors:  M J Zoller; M Smith
Journal:  Nucleic Acids Res       Date:  1982-10-25       Impact factor: 16.971

10.  Convergent DNA synthesis: a non-enzymatic dimerization approach to circular oligodeoxynucleotides.

Authors:  E Rubin; S Rumney; S Wang; E T Kool
Journal:  Nucleic Acids Res       Date:  1995-09-11       Impact factor: 16.971
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  11 in total

1.  Organometallic activation of a fluorogen for templated nucleic acid detection.

Authors:  Raphael M Franzini; Eric T Kool
Journal:  Org Lett       Date:  2008-06-13       Impact factor: 6.005

2.  Recognition of DNA, RNA, and Proteins by Circular Oligonucleotides.

Authors:  Eric T Kool
Journal:  Acc Chem Res       Date:  1998-08-18       Impact factor: 22.384

3.  Preparation of modified long-mer RNAs and analysis of FMN binding to the ypaA aptamer from B. subtilis.

Authors:  Jennifer Frommer; Robert Hieronymus; Tamil Selvi Arunachalam; Sabine Heeren; Maria Jenckel; Anne Strahl; Bettina Appel; Sabine Müller
Journal:  RNA Biol       Date:  2014-03-26       Impact factor: 4.652

Review 4.  In vitro circularization of RNA.

Authors:  Sabine Müller; Bettina Appel
Journal:  RNA Biol       Date:  2016-09-26       Impact factor: 4.652

5.  New chemically reactive dsDNAs containing single internucleotide monophosphoryldithio links: reactivity of 5'-mercapto-oligodeoxyribonucleotides.

Authors:  V G Metelev; O A Borisova; E M Volkov; T S Oretskaya; N G Dolinnaya
Journal:  Nucleic Acids Res       Date:  2001-10-01       Impact factor: 16.971

6.  Flow cytometric detection of specific RNAs in native human cells with quenched autoligating FRET probes.

Authors:  Hiroshi Abe; Eric T Kool
Journal:  Proc Natl Acad Sci U S A       Date:  2005-12-29       Impact factor: 11.205

7.  DNA-Scaffolded Synergistic Catalysis.

Authors:  Edward B Pimentel; Trenton M Peters-Clarke; Joshua J Coon; Jeffrey D Martell
Journal:  J Am Chem Soc       Date:  2021-12-13       Impact factor: 16.383

8.  7-Azidomethoxy-coumarins as profluorophores for templated nucleic acid detection.

Authors:  Raphael M Franzini; Eric T Kool
Journal:  Chembiochem       Date:  2008-12-15       Impact factor: 3.164

9.  Unveiling hidden catalytic contributions of the conserved His/Trp-III in tyrosine recombinases: assembly of a novel active site in Flp recombinase harboring alanine at this position.

Authors:  Chien-Hui Ma; Agnieszka Kwiatek; Swetha Bolusani; Yuri Voziyanov; Makkuni Jayaram
Journal:  J Mol Biol       Date:  2007-02-20       Impact factor: 5.469

10.  New, stronger nucleophiles for nucleic acid-templated chemistry: Synthesis and application in fluorescence detection of cellular RNA.

Authors:  Gregory P Miller; Adam P Silverman; Eric T Kool
Journal:  Bioorg Med Chem       Date:  2007-05-03       Impact factor: 3.641
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