Literature DB >> 19923484

Rapid detection of aac(6')-Ib-cr quinolone resistance gene by pyrosequencing.

Thomas Guillard1, Véronique Duval, Hélène Moret, Lucien Brasme, Véronique Vernet-Garnier, Christophe de Champs.   

Abstract

Pyrosequencing was used to rapidly detect aac(6')-Ib and aac(6')-Ib-cr genes. This plasmid-mediated quinolone resistance determinant is increasing in extended-spectrum beta-lactamase-producing Enterobacteriaceae. This method is faster and more cost-effective than the methods previously described. Sequences obtained with this pyrosequencing method showed 100% concordance with conventional sequencing.

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Year:  2009        PMID： 19923484      PMCID： PMC2812248          DOI： 10.1128/JCM.01498-09

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN： 0095-1137            Impact factor:   5.948


  23 in total

1.  Plasmid-mediated quinolone resistance pump QepA2 in an Escherichia coli isolate from France.

Authors:  Vincent Cattoir; Laurent Poirel; Patrice Nordmann
Journal:  Antimicrob Agents Chemother       Date:  2008-07-21       Impact factor: 5.191

2.  Fluoroquinolone-modifying enzyme: a new adaptation of a common aminoglycoside acetyltransferase.

Authors:  Ari Robicsek; Jacob Strahilevitz; George A Jacoby; Mark Macielag; Darren Abbanat; Chi Hye Park; Karen Bush; David C Hooper
Journal:  Nat Med       Date:  2005-12-20       Impact factor: 53.440

3.  Typing of SHV extended-spectrum beta-lactamases by pyrosequencing in Klebsiella pneumoniae strains with chromosomal SHV beta-lactamase.

Authors:  Marjo Haanperä; Sofia D Forssten; Pentti Huovinen; Jari Jalava
Journal:  Antimicrob Agents Chemother       Date:  2008-05-05       Impact factor: 5.191

Review 4.  The worldwide emergence of plasmid-mediated quinolone resistance.

Authors:  Ari Robicsek; George A Jacoby; David C Hooper
Journal:  Lancet Infect Dis       Date:  2006-10       Impact factor: 25.071

5.  Mechanism of plasmid-mediated quinolone resistance.

Authors:  John H Tran; George A Jacoby
Journal:  Proc Natl Acad Sci U S A       Date:  2002-04-09       Impact factor: 11.205

6.  Identification of CTX-M-type extended-spectrum-beta-lactamase genes using real-time PCR and pyrosequencing.

Authors:  Thierry Naas; Cynthia Oxacelay; Patrice Nordmann
Journal:  Antimicrob Agents Chemother       Date:  2006-11-06       Impact factor: 5.191

7.  Pyrosequencing for rapid identification of carbapenem-hydrolysing OXA-type beta-lactamases in Acinetobacter baumannii.

Authors:  T Naas; L Poirel; P Nordmann
Journal:  Clin Microbiol Infect       Date:  2006-12       Impact factor: 8.067

8.  Surveillance for plasmid-mediated quinolone resistance determinants in Enterobacteriaceae within the Calgary Health Region, Canada: the emergence of aac(6')-Ib-cr.

Authors:  Johann D D Pitout; Yi Wei; Deirdre L Church; Daniel B Gregson
Journal:  J Antimicrob Chemother       Date:  2008-02-21       Impact factor: 5.790

9.  DNA sequencing with chain-terminating inhibitors.

Authors:  F Sanger; S Nicklen; A R Coulson
Journal:  Proc Natl Acad Sci U S A       Date:  1977-12       Impact factor: 11.205

10.  qnrD, a novel gene conferring transferable quinolone resistance in Salmonella enterica serovar Kentucky and Bovismorbificans strains of human origin.

Authors:  L M Cavaco; H Hasman; S Xia; F M Aarestrup
Journal:  Antimicrob Agents Chemother       Date:  2008-11-24       Impact factor: 5.191
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  11 in total

1.  High-resolution melt curve analysis for identification of single nucleotide mutations in the quinolone resistance gene aac(6')-Ib-cr.

Authors:  Carlos Hidalgo-Grass; Jacob Strahilevitz
Journal:  Antimicrob Agents Chemother       Date:  2010-05-24       Impact factor: 5.191

2.  aac(6')-Ib-cr genotyping by simultaneous high-resolution melting analyses of an unlabeled probe and full-length amplicon.

Authors:  Jan M Bell; John D Turnidge; Patiyan Andersson
Journal:  Antimicrob Agents Chemother       Date:  2009-12-14       Impact factor: 5.191

3.  Practical disk-based method for detection of Escherichia coli clinical isolates producing the fluoroquinolone-modifying enzyme AAC(6')-Ib-cr.

Authors:  Jun-Ichi Wachino; Kunikazu Yamane; Yoshichika Arakawa
Journal:  J Clin Microbiol       Date:  2011-04-06       Impact factor: 5.948

Review 4.  Plasmid-mediated quinolone resistance.

Authors:  George A Jacoby; Jacob Strahilevitz; David C Hooper
Journal:  Microbiol Spectr       Date:  2014-10

5.  Ciprofloxacin treatment failure in a murine model of pyelonephritis due to an AAC(6')-Ib-cr-producing Escherichia coli strain susceptible to ciprofloxacin in vitro.

Authors:  T Guillard; E Cambau; F Chau; L Massias; C de Champs; B Fantin
Journal:  Antimicrob Agents Chemother       Date:  2013-09-09       Impact factor: 5.191

6.  Rapid detection of AAC(6')-Ib-cr production using a MALDI-TOF MS strategy.

Authors:  C-A Pardo; R N Tan; C Hennequin; R Beyrouthy; R Bonnet; F Robin
Journal:  Eur J Clin Microbiol Infect Dis       Date:  2016-08-24       Impact factor: 3.267

Review 7.  Non-phenotypic tests to detect and characterize antibiotic resistance mechanisms in Enterobacteriaceae.

Authors:  Agnese Lupo; Krisztina M Papp-Wallace; Parham Sendi; Robert A Bonomo; Andrea Endimiani
Journal:  Diagn Microbiol Infect Dis       Date:  2013-10-03       Impact factor: 2.803

8.  Molecular characterization of extraintestinal Escherichia coli isolates in Japan: relationship between sequence types and mutation patterns of quinolone resistance-determining regions analyzed by pyrosequencing.

Authors:  Nozomi Aoike; Tomoo Saga; Ryuji Sakata; Ayumi Yoshizumi; Soichiro Kimura; Morihiro Iwata; Sadako Yoshizawa; Yasuyuki Sugasawa; Yoshikazu Ishii; Keizo Yamaguchi; Kazuhiro Tateda
Journal:  J Clin Microbiol       Date:  2013-03-20       Impact factor: 5.948

9.  The co-selection of fluoroquinolone resistance genes in the gut flora of Vietnamese children.

Authors:  Le Thi Minh Vien; Ngo Ngoc Quang Minh; Tang Chi Thuong; Huynh Duy Khuong; Tran Vu Thieu Nga; Corinne Thompson; James I Campbell; Menno de Jong; Jeremy J Farrar; Constance Schultsz; H Rogier van Doorn; Stephen Baker
Journal:  PLoS One       Date:  2012-08-24       Impact factor: 3.240

10.  Fluoroquinolone Resistance Mechanisms and population structure of Enterobacter cloacae non-susceptible to Ertapenem in North-Eastern France.

Authors:  Thomas Guillard; Pascal Cholley; Anne Limelette; Didier Hocquet; Lucie Matton; Christophe Guyeux; Anne-Laure Lebreil; Odile Bajolet; Lucien Brasme; Janick Madoux; Véronique Vernet-Garnier; Coralie Barbe; Xavier Bertrand; Christophe de Champs On Behalf Of CarbaFrEst Group
Journal:  Front Microbiol       Date:  2015-10-23       Impact factor: 5.640
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