Literature DB >> 20008777

aac(6')-Ib-cr genotyping by simultaneous high-resolution melting analyses of an unlabeled probe and full-length amplicon.

Jan M Bell1, John D Turnidge, Patiyan Andersson.   

Abstract

We have developed a time- and cost-efficient one-step closed-tube assay for genotyping of aac(6')-Ib-cr that is capable of distinguishing between the two genetic aac(6')-Ib-cr variants. Our genotyping assay uses the combined information of simultaneously acquired high-resolution melting data from an unlabeled probe and the full-length amplicon.

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Year:  2009        PMID： 20008777      PMCID： PMC2825968          DOI： 10.1128/AAC.01476-09

Source DB:  PubMed          Journal:  Antimicrob Agents Chemother        ISSN： 0066-4804            Impact factor:   5.191


  12 in total

1.  Identification of a plasmid encoding SHV-12, TEM-1, and a variant of IMP-2 metallo-beta-lactamase, IMP-8, from a clinical isolate of Klebsiella pneumoniae.

Authors:  J J Yan; W C Ko; J J Wu
Journal:  Antimicrob Agents Chemother       Date:  2001-08       Impact factor: 5.191

2.  Prevalence in the United States of aac(6')-Ib-cr encoding a ciprofloxacin-modifying enzyme.

Authors:  Chi Hye Park; Ari Robicsek; George A Jacoby; Daniel Sahm; David C Hooper
Journal:  Antimicrob Agents Chemother       Date:  2006-09-05       Impact factor: 5.191

3.  High prevalence of plasmid-mediated quinolone resistance determinants qnr, aac(6')-Ib-cr, and qepA among ceftiofur-resistant Enterobacteriaceae isolates from companion and food-producing animals.

Authors:  Junying Ma; Zhenling Zeng; Zhangliu Chen; Xiaogang Xu; Xiaoying Wang; Yuting Deng; Dianhong Lü; Liangzong Huang; Yunyuan Zhang; Jianhua Liu; Minggui Wang
Journal:  Antimicrob Agents Chemother       Date:  2008-10-20       Impact factor: 5.191

4.  A Klebsiella pneumoniae sputum culture isolate from China carrying blaOXA-1, blaCTX-M-55 and aac(6')-Ib-cr.

Authors:  Weifeng Shi; Jianping Qin; Zuhuang Mi
Journal:  J Med Microbiol       Date:  2008-12       Impact factor: 2.472

5.  dfrA27, a new integron-associated trimethoprim resistance gene from Escherichia coli.

Authors:  Quhao Wei; Xiaofei Jiang; Zehua Yang; Nan Chen; Xiaoyun Chen; Gang Li; Yuan Lu
Journal:  J Antimicrob Chemother       Date:  2008-11-13       Impact factor: 5.790

6.  Fluoroquinolone-modifying enzyme: a new adaptation of a common aminoglycoside acetyltransferase.

Authors:  Ari Robicsek; Jacob Strahilevitz; George A Jacoby; Mark Macielag; Darren Abbanat; Chi Hye Park; Karen Bush; David C Hooper
Journal:  Nat Med       Date:  2005-12-20       Impact factor: 53.440

7.  Rapid detection of aac(6')-Ib-cr quinolone resistance gene by pyrosequencing.

Authors:  Thomas Guillard; Véronique Duval; Hélène Moret; Lucien Brasme; Véronique Vernet-Garnier; Christophe de Champs
Journal:  J Clin Microbiol       Date:  2009-11-18       Impact factor: 5.948

8.  Emergence of the quinolone resistance-mediating gene aac(6')-Ib-cr in extended-spectrum-beta-lactamase-producing Klebsiella isolates collected in Slovenia between 2000 and 2005.

Authors:  Jerneja Ambrozic Avgustin; Rok Keber; Katja Zerjavic; Toni Orazem; Miklavz Grabnar
Journal:  Antimicrob Agents Chemother       Date:  2007-09-10       Impact factor: 5.191

9.  Prevalence of aac(6')-Ib-cr encoding a ciprofloxacin-modifying enzyme among Enterobacteriaceae blood isolates in Korea.

Authors:  Eun Sil Kim; Jin-Yong Jeong; Jae-Bum Jun; Sang-Ho Choi; Sang-Oh Lee; Mi-Na Kim; Jun Hee Woo; Yang Soo Kim
Journal:  Antimicrob Agents Chemother       Date:  2009-03-16       Impact factor: 5.191

10.  Prevalence and diversity of qnr alleles in AmpC-producing Enterobacter cloacae, Enterobacter aerogenes, Citrobacter freundii and Serratia marcescens: a multicentre study from Korea.

Authors:  Yeon-Joon Park; Jin Kyung Yu; Seungok Lee; Eun-Jee Oh; Gun-Jo Woo
Journal:  J Antimicrob Chemother       Date:  2007-07-27       Impact factor: 5.790
View more
  9 in total

1.  High-resolution melt curve analysis for identification of single nucleotide mutations in the quinolone resistance gene aac(6')-Ib-cr.

Authors:  Carlos Hidalgo-Grass; Jacob Strahilevitz
Journal:  Antimicrob Agents Chemother       Date:  2010-05-24       Impact factor: 5.191

2.  Practical disk-based method for detection of Escherichia coli clinical isolates producing the fluoroquinolone-modifying enzyme AAC(6')-Ib-cr.

Authors:  Jun-Ichi Wachino; Kunikazu Yamane; Yoshichika Arakawa
Journal:  J Clin Microbiol       Date:  2011-04-06       Impact factor: 5.948

Review 3.  Plasmid-mediated quinolone resistance.

Authors:  George A Jacoby; Jacob Strahilevitz; David C Hooper
Journal:  Microbiol Spectr       Date:  2014-10

4.  Rapid detection and identification of Aspergillus from lower respiratory tract specimens by use of a combined probe-high-resolution melting analysis.

Authors:  María Alonso; Pilar Escribano; Jesus Guinea; Sandra Recio; Ainhoa Simon; Teresa Peláez; Emilio Bouza; Darío García de Viedma
Journal:  J Clin Microbiol       Date:  2012-07-25       Impact factor: 5.948

Review 5.  Aminoglycoside modifying enzymes.

Authors:  Maria S Ramirez; Marcelo E Tolmasky
Journal:  Drug Resist Updat       Date:  2010-09-15       Impact factor: 18.500

Review 6.  Non-phenotypic tests to detect and characterize antibiotic resistance mechanisms in Enterobacteriaceae.

Authors:  Agnese Lupo; Krisztina M Papp-Wallace; Parham Sendi; Robert A Bonomo; Andrea Endimiani
Journal:  Diagn Microbiol Infect Dis       Date:  2013-10-03       Impact factor: 2.803

7.  The co-selection of fluoroquinolone resistance genes in the gut flora of Vietnamese children.

Authors:  Le Thi Minh Vien; Ngo Ngoc Quang Minh; Tang Chi Thuong; Huynh Duy Khuong; Tran Vu Thieu Nga; Corinne Thompson; James I Campbell; Menno de Jong; Jeremy J Farrar; Constance Schultsz; H Rogier van Doorn; Stephen Baker
Journal:  PLoS One       Date:  2012-08-24       Impact factor: 3.240

8.  Development and inter-laboratory validation of unlabeled probe melting curve analysis for detection of JAK2 V617F mutation in polycythemia vera.

Authors:  Zhiyuan Wu; Hong Yuan; Xinju Zhang; Weiwei Liu; Jinhua Xu; Wei Zhang; Ming Guan
Journal:  PLoS One       Date:  2011-10-20       Impact factor: 3.240

9.  Minim typing--a rapid and low cost MLST based typing tool for Klebsiella pneumoniae.

Authors:  Patiyan Andersson; Steven Y C Tong; Jan M Bell; John D Turnidge; Philip M Giffard
Journal:  PLoS One       Date:  2012-03-12       Impact factor: 3.240
  9 in total

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