Literature DB >> 18458132

Typing of SHV extended-spectrum beta-lactamases by pyrosequencing in Klebsiella pneumoniae strains with chromosomal SHV beta-lactamase.

Marjo Haanperä1, Sofia D Forssten, Pentti Huovinen, Jari Jalava.   

Abstract

In Klebsiella pneumoniae, the cooccurrence of chromosomal and plasmid-mediated beta-lactamases can hinder their accurate molecular detection. We developed a fast and reliable method that allows the typing of isolates carrying more than one SHV gene. The method is based on pyrosequencing the DNA sequence corresponding to amino acid positions 35, 238, and 240.

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Year:  2008        PMID： 18458132      PMCID： PMC2443882          DOI： 10.1128/AAC.01259-07

Source DB:  PubMed          Journal:  Antimicrob Agents Chemother        ISSN： 0066-4804            Impact factor:   5.191


  20 in total

1.  A standard numbering scheme for the class A beta-lactamases.

Authors:  R P Ambler; A F Coulson; J M Frère; J M Ghuysen; B Joris; M Forsman; R C Levesque; G Tiraby; S G Waley
Journal:  Biochem J       Date:  1991-05-15       Impact factor: 3.857

2.  Detection and quantification of macrolide resistance mutations at positions 2058 and 2059 of the 23S rRNA gene by pyrosequencing.

Authors:  Marjo Haanperä; Pentti Huovinen; Jari Jalava
Journal:  Antimicrob Agents Chemother       Date:  2005-01       Impact factor: 5.191

3.  Application of minimal sequence quality values prevents misidentification of the blaSHV type in single bacterial isolates carrying different SHV extended-spectrum beta-lactamase genes.

Authors:  Nashwan Al Naiemi; Kim Schipper; Birgitta Duim; Aldert Bart
Journal:  J Clin Microbiol       Date:  2006-05       Impact factor: 5.948

4.  Klebsiella pneumoniae strains carrying the chromosomal SHV-11 beta-lactamase gene produce the plasmid-mediated SHV-12 extended-spectrum beta-lactamase more frequently than those carrying the chromosomal SHV-1 beta-lactamase gene.

Authors:  Yong Hwan Lee; Byungkyu Cho; Il Kwon Bae; Chulhun L Chang; Seok Hoon Jeong
Journal:  J Antimicrob Chemother       Date:  2006-04-04       Impact factor: 5.790

5.  Pyrosequencing as a rapid tool for identification of GES-type extended-spectrum beta-lactamases.

Authors:  Laurent Poirel; Thierry Naas; Patrice Nordmann
Journal:  J Clin Microbiol       Date:  2006-08       Impact factor: 5.948

6.  A sequencing method based on real-time pyrophosphate.

Authors:  M Ronaghi; M Uhlén; P Nyrén
Journal:  Science       Date:  1998-07-17       Impact factor: 47.728

7.  Role of Ser-238 and Lys-240 in the hydrolysis of third-generation cephalosporins by SHV-type beta-lactamases probed by site-directed mutagenesis and three-dimensional modeling.

Authors:  A Huletsky; J R Knox; R C Levesque
Journal:  J Biol Chem       Date:  1993-02-15       Impact factor: 5.157

8.  Identification of CTX-M-type extended-spectrum-beta-lactamase genes using real-time PCR and pyrosequencing.

Authors:  Thierry Naas; Cynthia Oxacelay; Patrice Nordmann
Journal:  Antimicrob Agents Chemother       Date:  2006-11-06       Impact factor: 5.191

9.  Pyrosequencing for rapid identification of carbapenem-hydrolysing OXA-type beta-lactamases in Acinetobacter baumannii.

Authors:  T Naas; L Poirel; P Nordmann
Journal:  Clin Microbiol Infect       Date:  2006-12       Impact factor: 8.067

10.  Effects of phenotype and genotype on methods for detection of extended-spectrum-beta-lactamase-producing clinical isolates of Escherichia coli and Klebsiella pneumoniae in Norway.

Authors:  Ståle Tofteland; Bjørg Haldorsen; Kristin H Dahl; Gunnar S Simonsen; Martin Steinbakk; Timothy R Walsh; Arnfinn Sundsfjord
Journal:  J Clin Microbiol       Date:  2006-11-01       Impact factor: 5.948
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  7 in total

1.  Rapid detection of aac(6')-Ib-cr quinolone resistance gene by pyrosequencing.

Authors:  Thomas Guillard; Véronique Duval; Hélène Moret; Lucien Brasme; Véronique Vernet-Garnier; Christophe de Champs
Journal:  J Clin Microbiol       Date:  2009-11-18       Impact factor: 5.948

2.  Pyrosequencing using the single-nucleotide polymorphism protocol for rapid determination of TEM- and SHV-type extended-spectrum beta-lactamases in clinical isolates and identification of the novel beta-lactamase genes blaSHV-48, blaSHV-105, and blaTEM-155.

Authors:  C Hal Jones; Alexey Ruzin; Margareta Tuckman; Melissa A Visalli; Peter J Petersen; Patricia A Bradford
Journal:  Antimicrob Agents Chemother       Date:  2008-12-15       Impact factor: 5.191

Review 3.  Non-phenotypic tests to detect and characterize antibiotic resistance mechanisms in Enterobacteriaceae.

Authors:  Agnese Lupo; Krisztina M Papp-Wallace; Parham Sendi; Robert A Bonomo; Andrea Endimiani
Journal:  Diagn Microbiol Infect Dis       Date:  2013-10-03       Impact factor: 2.803

4.  A qPCR and multiplex pyrosequencing assay combined with automated data processing for rapid and unambiguous detection of ESBL-producers Enterobacteriaceae.

Authors:  Yann Deccache; Leonid M Irenge; Jérôme Ambroise; Encho Savov; Dan Marinescu; Raphael B Chirimwami; Jean-Luc Gala
Journal:  AMB Express       Date:  2015-08-12       Impact factor: 3.298

5.  Phenotypic and Molecular Characterization of Antimicrobial Resistance in Klebsiella spp. Isolates from Companion Animals in Japan: Clonal Dissemination of Multidrug-Resistant Extended-Spectrum β-Lactamase-Producing Klebsiella pneumoniae.

Authors:  Kazuki Harada; Takae Shimizu; Yujiro Mukai; Ken Kuwajima; Tomomi Sato; Masaru Usui; Yutaka Tamura; Yui Kimura; Tadashi Miyamoto; Yuzo Tsuyuki; Asami Ohki; Yasushi Kataoka
Journal:  Front Microbiol       Date:  2016-06-29       Impact factor: 5.640

Review 6.  A Review of SHV Extended-Spectrum β-Lactamases: Neglected Yet Ubiquitous.

Authors:  Apostolos Liakopoulos; Dik Mevius; Daniela Ceccarelli
Journal:  Front Microbiol       Date:  2016-09-05       Impact factor: 5.640

7.  Sharing more than friendship - transmission of NDM-5 ST167 and CTX-M-9 ST69 Escherichia coli between dogs and humans in a family, Finland, 2015.

Authors:  Thomas Grönthal; Monica Österblad; Marjut Eklund; Jari Jalava; Suvi Nykäsenoja; Katariina Pekkanen; Merja Rantala
Journal:  Euro Surveill       Date:  2018-07
  7 in total

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