Literature DB >> 19906852

Non-genetic heterogeneity of cells in development: more than just noise.

Sui Huang1.   

Abstract

Cell-to-cell variability of gene expression in clonal populations of mammalian cells is ubiquitous. However, because molecular biologists habitually assume uniformity of the cell populations that serve as starting material for experimental analysis, attention to such non-genetic heterogeneity has been scant. As awareness of, and interest in, understanding its biological significance increases, this Primer attempts to clarify the confusing terminologies used in an emerging field that often conflates heterogeneity with noise, and provides a qualitative introduction to the fundamental dynamic principles that underlie heterogeneity. It thus aims to present a useful conceptual framework to organize, analyze and communicate observations made at the resolution of individual cells that indicate that heterogeneity of cell populations plays a biological role, such as in multipotency and cell fate decision.

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Year:  2009        PMID: 19906852      PMCID: PMC2778736          DOI: 10.1242/dev.035139

Source DB:  PubMed          Journal:  Development        ISSN: 0950-1991            Impact factor:   6.868


  76 in total

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3.  Absolute rate theories of epigenetic stability.

Authors:  Aleksandra M Walczak; José N Onuchic; Peter G Wolynes
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Review 4.  Epigenetics: a landscape takes shape.

Authors:  Aaron D Goldberg; C David Allis; Emily Bernstein
Journal:  Cell       Date:  2007-02-23       Impact factor: 41.582

5.  The energy landscapes and motions of proteins.

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Review 6.  Stem cell states, fates, and the rules of attraction.

Authors:  Tariq Enver; Martin Pera; Carsten Peterson; Peter W Andrews
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Review 7.  Heterogeneity of embryonic and adult stem cells.

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Journal:  Cell Stem Cell       Date:  2008-11-06       Impact factor: 24.633

Review 8.  A mutator phenotype in cancer.

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Journal:  Cancer Res       Date:  2001-04-15       Impact factor: 12.701

Review 9.  Nature, nurture, or chance: stochastic gene expression and its consequences.

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10.  Maintenance of multiplication rate stability by cell populations in the face of heterogeneity among individual cells.

Authors:  R Grundel; H Rubin
Journal:  J Cell Sci       Date:  1988-12       Impact factor: 5.285

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  167 in total

Review 1.  Dynamical systems approach to endothelial heterogeneity.

Authors:  Erzsébet Ravasz Regan; William C Aird
Journal:  Circ Res       Date:  2012-06-22       Impact factor: 17.367

2.  Transcript profiling of individual twin blastomeres derived by splitting two-cell stage murine embryos.

Authors:  R Michael Roberts; Mika Katayama; Scott R Magnuson; Michael T Falduto; Karen E O Torres
Journal:  Biol Reprod       Date:  2010-11-10       Impact factor: 4.285

3.  A metric and workflow for quality control in the analysis of heterogeneity in phenotypic profiles and screens.

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Journal:  Methods       Date:  2015-11-04       Impact factor: 3.608

4.  Dichotomous noise models of gene switches.

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5.  A dynamic picture of protein behavior in cells.

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Review 6.  Single-cell analysis of the transcriptome and its application in the characterization of stem cells and early embryos.

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Journal:  Cell Mol Life Sci       Date:  2014-03-21       Impact factor: 9.261

7.  RNA Sequencing and Analysis.

Authors:  Kimberly R Kukurba; Stephen B Montgomery
Journal:  Cold Spring Harb Protoc       Date:  2015-04-13

Review 8.  New mass spectrometry technologies contributing towards comprehensive and high throughput omics analyses of single cells.

Authors:  Sneha P Couvillion; Ying Zhu; Gabe Nagy; Joshua N Adkins; Charles Ansong; Ryan S Renslow; Paul D Piehowski; Yehia M Ibrahim; Ryan T Kelly; Thomas O Metz
Journal:  Analyst       Date:  2019-01-28       Impact factor: 4.616

Review 9.  Imaging flow cytometry: coping with heterogeneity in biological systems.

Authors:  Natasha S Barteneva; Elizaveta Fasler-Kan; Ivan A Vorobjev
Journal:  J Histochem Cytochem       Date:  2012-06-27       Impact factor: 2.479

10.  Populational heterogeneity vs. temporal fluctuation in Escherichia coli flagellar motor switching.

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Journal:  Biophys J       Date:  2013-11-05       Impact factor: 4.033

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