Literature DB >> 19856129

Production of membrane proteins for NMR studies using the condensed single protein (cSPP) production system.

Lili Mao1, Yuefeng Tang, S Thangminlal Vaiphei, Tsutomu Shimazu, Sung-Gun Kim, Rajeswari Mani, Elias Fakhoury, Eileen White, Gaetano T Montelione, Masayori Inouye.   

Abstract

In the Single Protein Production (SPP) method, all E. coli cellular mRNAs are eliminated by the induction of MazF, an ACA-specific mRNA interferase. When an mRNA for a membrane protein, engineered to have no ACA sequences without altering its amino acid sequence, is induced in the MazF-induced cells, E. coli is converted into a bioreactor producing only the targeted membrane protein. Here we demonstrate that three prokaryotic inner membrane proteins, two prokaryotic outer membrane proteins, and one human virus membrane protein can be produced at very high levels, and assembled in appropriate membrane fractions. The condensed SPP (cSPP) system was used to selectively produce isotope-enriched membrane proteins for NMR studies in up to 150-fold condensed culture without affecting protein yields, providing more than 99% cost saving for isotopes. As a novel application of the cSPP system for studies of membrane proteins prior to purification we also demonstrate, for the first time, fast detergent screening by microcoil NMR and well-resolved NMR spectra of several targeted integral membrane proteins obtained without purification.

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Year:  2009        PMID: 19856129      PMCID: PMC2923930          DOI: 10.1007/s10969-009-9072-0

Source DB:  PubMed          Journal:  J Struct Funct Genomics        ISSN: 1345-711X


  12 in total

1.  Structure of outer membrane protein A transmembrane domain by NMR spectroscopy.

Authors:  A Arora; F Abildgaard; J H Bushweller; L K Tamm
Journal:  Nat Struct Biol       Date:  2001-04

2.  An approach to membrane protein structure without crystals.

Authors:  Paul L Sorgen; Yonglin Hu; Lan Guan; H Ronald Kaback; Mark E Girvin
Journal:  Proc Natl Acad Sci U S A       Date:  2002-10-21       Impact factor: 11.205

3.  An evaluation of detergents for NMR structural studies of membrane proteins.

Authors:  Ray D Krueger-Koplin; Paul L Sorgen; Suzanne T Krueger-Koplin; Iván O Rivera-Torres; Sean M Cahill; David B Hicks; Leo Grinius; Terry A Krulwich; Mark E Girvin
Journal:  J Biomol NMR       Date:  2004-01       Impact factor: 2.835

4.  Single protein production (SPP) system in Escherichia coli.

Authors:  Motoo Suzuki; Lili Mao; Masayori Inouye
Journal:  Nat Protoc       Date:  2007       Impact factor: 13.491

5.  Microgram-scale protein structure determination by NMR.

Authors:  James M Aramini; Paolo Rossi; Clemens Anklin; Rong Xiao; Gaetano T Montelione
Journal:  Nat Methods       Date:  2007-05-13       Impact factor: 28.547

6.  Microscale NMR screening of new detergents for membrane protein structural biology.

Authors:  Qinghai Zhang; Reto Horst; Michael Geralt; Xingquan Ma; Wen-Xu Hong; M G Finn; Raymond C Stevens; Kurt Wüthrich
Journal:  J Am Chem Soc       Date:  2008-05-14       Impact factor: 15.419

7.  Bacterial bioreactors for high yield production of recombinant protein.

Authors:  Motoo Suzuki; Rohini Roy; Haiyan Zheng; Nancy Woychik; Masayori Inouye
Journal:  J Biol Chem       Date:  2006-10-04       Impact factor: 5.157

8.  NMRPipe: a multidimensional spectral processing system based on UNIX pipes.

Authors:  F Delaglio; S Grzesiek; G W Vuister; G Zhu; J Pfeifer; A Bax
Journal:  J Biomol NMR       Date:  1995-11       Impact factor: 2.835

9.  Attenuated T2 relaxation by mutual cancellation of dipole-dipole coupling and chemical shift anisotropy indicates an avenue to NMR structures of very large biological macromolecules in solution.

Authors:  K Pervushin; R Riek; G Wider; K Wüthrich
Journal:  Proc Natl Acad Sci U S A       Date:  1997-11-11       Impact factor: 11.205

10.  Cold-shock induced high-yield protein production in Escherichia coli.

Authors:  Guoliang Qing; Li-Chung Ma; Ahmad Khorchid; G V T Swapna; Tapas K Mal; Masanori Mitta Takayama; Bing Xia; Sangita Phadtare; Haiping Ke; Thomas Acton; Gaetano T Montelione; Mitsuhiko Ikura; Masayori Inouye
Journal:  Nat Biotechnol       Date:  2004-06-13       Impact factor: 54.908

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  13 in total

1.  Suppression of phospholipid biosynthesis by cerulenin in the condensed Single-Protein-Production (cSPP) system.

Authors:  Lili Mao; Koichi Inoue; Yisong Tao; Gaetano T Montelione; Ann E McDermott; Masayori Inouye
Journal:  J Biomol NMR       Date:  2011-01-30       Impact factor: 2.835

2.  Membrane proteins, magic-angle spinning, and in-cell NMR.

Authors:  Gary J Pielak; Fang Tian
Journal:  Proc Natl Acad Sci U S A       Date:  2012-03-12       Impact factor: 11.205

Review 3.  Regulation of growth and death in Escherichia coli by toxin-antitoxin systems.

Authors:  Yoshihiro Yamaguchi; Masayori Inouye
Journal:  Nat Rev Microbiol       Date:  2011-09-19       Impact factor: 60.633

Review 4.  Advances in protein NMR provided by the NIGMS Protein Structure Initiative: impact on drug discovery.

Authors:  Gaetano T Montelione; Thomas Szyperski
Journal:  Curr Opin Drug Discov Devel       Date:  2010-05

5.  Use of amino acids as inducers for high-level protein expression in the single-protein production system.

Authors:  S Thangminlal Vaiphei; Lili Mao; Tsutomu Shimazu; Jung-Ho Park; Masayori Inouye
Journal:  Appl Environ Microbiol       Date:  2010-07-23       Impact factor: 4.792

6.  Secretion of human superoxide dismutase in Escherichia coli using the condensed single-protein-production system.

Authors:  Lili Mao; Peter B Stathopulos; Mitsuhiko Ikura; Masayori Inouye
Journal:  Protein Sci       Date:  2010-12       Impact factor: 6.725

7.  In situ structural characterization of a recombinant protein in native Escherichia coli membranes with solid-state magic-angle-spinning NMR.

Authors:  Riqiang Fu; Xingsheng Wang; Conggang Li; Adriana N Santiago-Miranda; Gary J Pielak; Fang Tian
Journal:  J Am Chem Soc       Date:  2011-07-26       Impact factor: 15.419

8.  The E. coli single protein production system for production and structural analysis of membrane proteins.

Authors:  Lili Mao; S Thangminlal Vaiphei; Tsutomu Shimazu; William M Schneider; Yuefeng Tang; Rajeswari Mani; Monica J Roth; Gaetano T Montelione; Masayori Inouye
Journal:  J Struct Funct Genomics       Date:  2009-10-15

Review 9.  The quiet renaissance of protein nuclear magnetic resonance.

Authors:  Paul J Barrett; Jiang Chen; Min-Kyu Cho; Ji-Hun Kim; Zhenwei Lu; Sijo Mathew; Dungeng Peng; Yuanli Song; Wade D Van Horn; Tiandi Zhuang; Frank D Sönnichsen; Charles R Sanders
Journal:  Biochemistry       Date:  2013-02-12       Impact factor: 3.162

10.  A microscale protein NMR sample screening pipeline.

Authors:  Paolo Rossi; G V T Swapna; Yuanpeng J Huang; James M Aramini; Clemens Anklin; Kenith Conover; Keith Hamilton; Rong Xiao; Thomas B Acton; Asli Ertekin; John K Everett; Gaetano T Montelione
Journal:  J Biomol NMR       Date:  2009-11-14       Impact factor: 2.835

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