Literature DB >> 23368985

The quiet renaissance of protein nuclear magnetic resonance.

Paul J Barrett1, Jiang Chen, Min-Kyu Cho, Ji-Hun Kim, Zhenwei Lu, Sijo Mathew, Dungeng Peng, Yuanli Song, Wade D Van Horn, Tiandi Zhuang, Frank D Sönnichsen, Charles R Sanders.   

Abstract

From roughly 1985 through the start of the new millennium, the cutting edge of solution protein nuclear magnetic resonance (NMR) spectroscopy was to a significant extent driven by the aspiration to determine structures. Here we survey recent advances in protein NMR that herald a renaissance in which a number of its most important applications reflect the broad problem-solving capability displayed by this method during its classical era during the 1970s and early 1980s.

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Year:  2013        PMID: 23368985      PMCID: PMC3592982          DOI: 10.1021/bi4000436

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  163 in total

1.  Intrinsic disorder and protein function.

Authors:  A Keith Dunker; Celeste J Brown; J David Lawson; Lilia M Iakoucheva; Zoran Obradović
Journal:  Biochemistry       Date:  2002-05-28       Impact factor: 3.162

Review 2.  Insights into the structure and dynamics of unfolded proteins from nuclear magnetic resonance.

Authors:  H Jane Dyson; Peter E Wright
Journal:  Adv Protein Chem       Date:  2002

3.  NMR analysis of methyl groups at 100-500 kDa: model systems and Arp2/3 complex.

Authors:  Mara Kreishman-Deitrick; Coumaran Egile; David W Hoyt; Joseph J Ford; Rong Li; Michael K Rosen
Journal:  Biochemistry       Date:  2003-07-22       Impact factor: 3.162

Review 4.  Intrinsically unstructured proteins.

Authors:  Peter Tompa
Journal:  Trends Biochem Sci       Date:  2002-10       Impact factor: 13.807

5.  Ile, Leu, and Val methyl assignments of the 723-residue malate synthase G using a new labeling strategy and novel NMR methods.

Authors:  Vitali Tugarinov; Lewis E Kay
Journal:  J Am Chem Soc       Date:  2003-11-12       Impact factor: 15.419

Review 6.  Nuclear magnetic resonance spectroscopy of high-molecular-weight proteins.

Authors:  Vitali Tugarinov; Peter M Hwang; Lewis E Kay
Journal:  Annu Rev Biochem       Date:  2004       Impact factor: 23.643

7.  Biomolecular NMR using a microcoil NMR probe--new technique for the chemical shift assignment of aromatic side chains in proteins.

Authors:  Wolfgang Peti; James Norcross; Gary Eldridge; Mark O'Neil-Johnson
Journal:  J Am Chem Soc       Date:  2004-05-12       Impact factor: 15.419

Review 8.  Theory and applications of NMR-based screening in pharmaceutical research.

Authors:  Christopher A Lepre; Jonathan M Moore; Jeffrey W Peng
Journal:  Chem Rev       Date:  2004-08       Impact factor: 60.622

9.  Sulindac sulfide is a noncompetitive gamma-secretase inhibitor that preferentially reduces Abeta 42 generation.

Authors:  Yasuko Takahashi; Ikuo Hayashi; Yusuke Tominari; Kentaro Rikimaru; Yuichi Morohashi; Toshiyuki Kan; Hideaki Natsugari; Tohru Fukuyama; Taisuke Tomita; Takeshi Iwatsubo
Journal:  J Biol Chem       Date:  2003-03-10       Impact factor: 5.157

10.  Evidence that nonsteroidal anti-inflammatory drugs decrease amyloid beta 42 production by direct modulation of gamma-secretase activity.

Authors:  Sascha Weggen; Jason L Eriksen; Sarah A Sagi; Claus U Pietrzik; Victor Ozols; Abdul Fauq; Todd E Golde; Edward H Koo
Journal:  J Biol Chem       Date:  2003-06-12       Impact factor: 5.157

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  17 in total

Review 1.  Molecular basis of MAP kinase regulation.

Authors:  Wolfgang Peti; Rebecca Page
Journal:  Protein Sci       Date:  2013-10-19       Impact factor: 6.725

Review 2.  Nuclear magnetic resonance spectroscopy of the circadian clock of cyanobacteria.

Authors:  Yong-Gang Chang; Roger Tseng; Nai-Wei Kuo; Andy LiWang
Journal:  Integr Comp Biol       Date:  2013-05-10       Impact factor: 3.326

3.  RASP: rapid and robust backbone chemical shift assignments from protein structure.

Authors:  Christopher A MacRaild; Raymond S Norton
Journal:  J Biomol NMR       Date:  2014-01-21       Impact factor: 2.835

Review 4.  The dynamic duo: combining NMR and small angle scattering in structural biology.

Authors:  Janosch Hennig; Michael Sattler
Journal:  Protein Sci       Date:  2014-04-17       Impact factor: 6.725

5.  Structure of a CutA1 divalent-cation tolerance protein from Cryptosporidium parvum, the protozoal parasite responsible for cryptosporidiosis.

Authors:  Garry W Buchko; Jan Abendroth; Matthew C Clifton; Howard Robinson; Yanfeng Zhang; Stephen N Hewitt; Bart L Staker; Thomas E Edwards; Wesley C Van Voorhis; Peter J Myler
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2015-04-18       Impact factor: 1.056

6.  K-Ras G-domain binding with signaling lipid phosphatidylinositol (4,5)-phosphate (PIP2): membrane association, protein orientation, and function.

Authors:  Shufen Cao; Stacey Chung; SoonJeung Kim; Zhenlu Li; Danny Manor; Matthias Buck
Journal:  J Biol Chem       Date:  2019-02-21       Impact factor: 5.157

7.  Engineered solubility tag for solution NMR of proteins.

Authors:  Amy M Ruschak; Justine D Rose; Michael P Coughlin; Tomasz L Religa
Journal:  Protein Sci       Date:  2013-09-20       Impact factor: 6.725

Review 8.  Recent contributions of structure-based drug design to the development of antibacterial compounds.

Authors:  Bart L Staker; Garry W Buchko; Peter J Myler
Journal:  Curr Opin Microbiol       Date:  2015-10       Impact factor: 7.934

9.  Ligand-induced structural transitions combined with paramagnetic ions facilitate unambiguous NMR assignments of methyl groups in large proteins.

Authors:  Lars Mühlberg; Tuncay Alarcin; Thorben Maass; Robert Creutznacher; Richard Küchler; Alvaro Mallagaray
Journal:  J Biomol NMR       Date:  2022-04-10       Impact factor: 2.582

10.  Deconvolution of Complex 1D NMR Spectra Using Objective Model Selection.

Authors:  Travis S Hughes; Henry D Wilson; Ian Mitchelle S de Vera; Douglas J Kojetin
Journal:  PLoS One       Date:  2015-08-04       Impact factor: 3.240

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