Literature DB >> 22139510

May cyclic nucleotides be a source for abiotic RNA synthesis?

Giovanna Costanzo1, Samanta Pino, Giorgia Botta, Raffaele Saladino, Ernesto Di Mauro.   

Abstract

Nucleic bases are obtained by heating formamide in the presence of various catalysts. Formamide chemistry also allows the formation of acyclonucleosides and the phosphorylation of nucleosides in every possible position, also affording 2',3' and 3',5' cyclic forms. We have reported that 3',5' cyclic GMP and 3',5' cyclic AMP polymerize in abiotic conditions yielding short oligonucleotides. The characterization of this reaction is being pursued, several of its parameters have been determined and experimental caveats are reported. The yield of non-enzymatic polymerization of cyclic purine nucleotides is very low. Polymerization is strongly enhanced by the presence of base-complementary RNA sequences.

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Year:  2011        PMID: 22139510     DOI: 10.1007/s11084-011-9249-y

Source DB:  PubMed          Journal:  Orig Life Evol Biosph        ISSN: 0169-6149            Impact factor:   1.950


  15 in total

1.  Click Chemistry: Diverse Chemical Function from a Few Good Reactions.

Authors:  Hartmuth C. Kolb; M. G. Finn; K. Barry Sharpless
Journal:  Angew Chem Int Ed Engl       Date:  2001-06-01       Impact factor: 15.336

2.  Photocatalysis and the origin of life: synthesis of nucleoside bases from formamide on TiO2(001) single surfaces.

Authors:  S D Senanayake; H Idriss
Journal:  Proc Natl Acad Sci U S A       Date:  2006-01-19       Impact factor: 11.205

3.  Nonenzymatic RNA ligation in water.

Authors:  Samanta Pino; Fabiana Ciciriello; Giovanna Costanzo; Ernesto Di Mauro
Journal:  J Biol Chem       Date:  2008-10-31       Impact factor: 5.157

Review 4.  From formamide to RNA: the roles of formamide and water in the evolution of chemical information.

Authors:  Raffaele Saladino; Claudia Crestini; Fabiana Ciciriello; Samanta Pino; Giovanna Costanzo; Ernesto Di Mauro
Journal:  Res Microbiol       Date:  2009-06-25       Impact factor: 3.992

5.  Catalysts for the self-polymerization of adenosine cyclic 2', 3'-phosphate.

Authors:  M S Verlander; R Lohrmann; L E Orgel
Journal:  J Mol Evol       Date:  1973-11-27       Impact factor: 2.395

6.  The enthalpy of hydrolysis of various 3',5'-and 2',3'-cyclic nucleotides.

Authors:  S A Rudolph; E M Johnson; P Greengard
Journal:  J Biol Chem       Date:  1971-03-10       Impact factor: 5.157

7.  Synthesis of activated pyrimidine ribonucleotides in prebiotically plausible conditions.

Authors:  Matthew W Powner; Béatrice Gerland; John D Sutherland
Journal:  Nature       Date:  2009-05-14       Impact factor: 49.962

Review 8.  Formamide chemistry and the origin of informational polymers.

Authors:  Raffaele Saladino; Claudia Crestini; Fabiana Ciciriello; Giovanna Costanzo; Ernesto Di Mauro
Journal:  Chem Biodivers       Date:  2007-04       Impact factor: 2.408

9.  Generation of long RNA chains in water.

Authors:  Giovanna Costanzo; Samanta Pino; Fabiana Ciciriello; Ernesto Di Mauro
Journal:  J Biol Chem       Date:  2009-10-02       Impact factor: 5.157

10.  One-pot TiO2-catalyzed synthesis of nucleic bases and acyclonucleosides from formamide: implications for the origin of life.

Authors:  Raffaele Saladino; Umberto Ciambecchini; Claudia Crestini; Giovanna Costanzo; Rodolfo Negri; Ernesto Di Mauro
Journal:  Chembiochem       Date:  2003-06-06       Impact factor: 3.164

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  2 in total

1.  Potential pitfalls in MALDI-TOF MS analysis of abiotically synthesized RNA oligonucleotides.

Authors:  Bradley T Burcar; Lauren M Cassidy; Elizabeth M Moriarty; Prakash C Joshi; Kristin M Coari; Linda B McGown
Journal:  Orig Life Evol Biosph       Date:  2013-06-22       Impact factor: 1.950

2.  The role of energy in the emergence of biology from chemistry.

Authors:  Daria V Dibrova; Michail Y Chudetsky; Michael Y Galperin; Eugene V Koonin; Armen Y Mulkidjanian
Journal:  Orig Life Evol Biosph       Date:  2012-10       Impact factor: 1.950

  2 in total

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