Literature DB >> 19767438

Complete genome sequence of Robiginitalea biformata HTCC2501.

Hyun-Myung Oh1, Stephen J Giovannoni, Kiyoung Lee, Steve Ferriera, Justin Johnson, Jang-Cheon Cho.   

Abstract

Robiginitalea biformata HTCC2501, isolated from the Sargasso Sea by dilution-to-extinction culturing, has been known as an aerobic chemoheterotroph with carotenoid pigments and dimorphic growth phases. Here, we announce the complete sequence of the R. biformata HTCC2501 genome, which contains genes for carotenoid biosynthesis and several macromolecule-degrading enzymes.

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Year:  2009        PMID： 19767438      PMCID： PMC2772462          DOI： 10.1128/JB.01191-09

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


  15 in total

1.  Natural assemblages of marine proteobacteria and members of the Cytophaga-Flavobacter cluster consuming low- and high-molecular-weight dissolved organic matter.

Authors:  M T Cottrell; D L Kirchman
Journal:  Appl Environ Microbiol       Date:  2000-04       Impact factor: 4.792

2.  Bacterioplankton compositions of lakes and oceans: a first comparison based on fluorescence in situ hybridization.

Authors:  F O Glöckner; B M Fuchs; R Amann
Journal:  Appl Environ Microbiol       Date:  1999-08       Impact factor: 4.792

3.  GenDB--an open source genome annotation system for prokaryote genomes.

Authors:  Folker Meyer; Alexander Goesmann; Alice C McHardy; Daniela Bartels; Thomas Bekel; Jörn Clausen; Jörn Kalinowski; Burkhard Linke; Oliver Rupp; Robert Giegerich; Alfred Pühler
Journal:  Nucleic Acids Res       Date:  2003-04-15       Impact factor: 16.971

4.  Proposed minimal standards for describing new taxa of the family Flavobacteriaceae and emended description of the family.

Authors:  Jean-Francois Bernardet; Yasuyoshi Nakagawa; Barry Holmes
Journal:  Int J Syst Evol Microbiol       Date:  2002-05       Impact factor: 2.747

5.  Reannotation of Shewanella oneidensis genome.

Authors:  N Daraselia; D Dernovoy; Y Tian; M Borodovsky; R Tatusov; T Tatusova
Journal:  OMICS       Date:  2003

Review 6.  Life with carbon monoxide.

Authors:  Stephen W Ragsdale
Journal:  Crit Rev Biochem Mol Biol       Date:  2004 May-Jun       Impact factor: 8.250

7.  Culturability and In situ abundance of pelagic bacteria from the North Sea.

Authors:  H Eilers; J Pernthaler; F O Glöckner; R Amann
Journal:  Appl Environ Microbiol       Date:  2000-07       Impact factor: 4.792

8.  Light stimulates growth of proteorhodopsin-containing marine Flavobacteria.

Authors:  Laura Gómez-Consarnau; José M González; Montserrat Coll-Lladó; Pontus Gourdon; Torbjörn Pascher; Richard Neutze; Carlos Pedrós-Alió; Jarone Pinhassi
Journal:  Nature       Date:  2007-01-11       Impact factor: 49.962

9.  Robiginitalea biformata gen. nov., sp. nov., a novel marine bacterium in the family Flavobacteriaceae with a higher G+C content.

Authors:  Jang-Cheon Cho; Stephen J Giovannoni
Journal:  Int J Syst Evol Microbiol       Date:  2004-07       Impact factor: 2.747

10.  Phage_Finder: automated identification and classification of prophage regions in complete bacterial genome sequences.

Authors:  Derrick E Fouts
Journal:  Nucleic Acids Res       Date:  2006-10-24       Impact factor: 16.971
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  13 in total

1.  Genome sequence of the novel marine member of the Gammaproteobacteria strain HTCC5015.

Authors:  J Cameron Thrash; Ulrich Stingl; Jang-Cheon Cho; Steve Ferriera; Justin Johnson; Kevin L Vergin; Stephen J Giovannoni
Journal:  J Bacteriol       Date:  2010-05-14       Impact factor: 3.490

2.  Genome sequences of strains HTCC2148 and HTCC2080, belonging to the OM60/NOR5 clade of the Gammaproteobacteria.

Authors:  J Cameron Thrash; Jang-Cheon Cho; Steve Ferriera; Justin Johnson; Kevin L Vergin; Stephen J Giovannoni
Journal:  J Bacteriol       Date:  2010-05-14       Impact factor: 3.490

3.  Complete genome sequence of Algoriphagus sp. PR1, bacterial prey of a colony-forming choanoflagellate.

Authors:  Rosanna A Alegado; Steven Ferriera; Chad Nusbaum; Sarah K Young; Qian Zeng; Alma Imamovic; Stephen R Fairclough; Nicole King
Journal:  J Bacteriol       Date:  2010-12-23       Impact factor: 3.490

4.  Complete genome sequence of strain HTCC2503T of Parvularcula bermudensis, the type species of the order "Parvularculales" in the class Alphaproteobacteria.

Authors:  Hyun-Myung Oh; Ilnam Kang; Kevin L Vergin; Dongmin Kang; Kwang-Hyun Rhee; Stephen J Giovannoni; Jang-Cheon Cho
Journal:  J Bacteriol       Date:  2010-10-29       Impact factor: 3.490

5.  Complete genome sequence of strain IMCC9063, belonging to SAR11 subgroup 3, isolated from the Arctic Ocean.

Authors:  Hyun-Myung Oh; Ilnam Kang; Kiyoung Lee; Yoonra Jang; Seung-Il Lim; Jang-Cheon Cho
Journal:  J Bacteriol       Date:  2011-04-22       Impact factor: 3.490

6.  Draft genome sequence of the novel agar-digesting marine bacterium HQM9.

Authors:  Zongjun Du; Zhewen Zhang; Tingting Miao; Jiayan Wu; Guoqiang Lü; Jun Yu; Jingfa Xiao; Guanjun Chen
Journal:  J Bacteriol       Date:  2011-07-01       Impact factor: 3.490

7.  On the role, ecology, phylogeny, and structure of dual-family immunophilins.

Authors:  Sailen Barik
Journal:  Cell Stress Chaperones       Date:  2017-05-31       Impact factor: 3.667

8.  Genome sequence of Lentisphaera araneosa HTCC2155T, the type species of the order Lentisphaerales in the phylum Lentisphaerae.

Authors:  J Cameron Thrash; Jang-Cheon Cho; Kevin L Vergin; Robert M Morris; Stephen J Giovannoni
Journal:  J Bacteriol       Date:  2010-04-02       Impact factor: 3.490

9.  Complete genome sequence of Croceibacter atlanticus HTCC2559T.

Authors:  Hyun-Myung Oh; Ilnam Kang; Steve Ferriera; Stephen J Giovannoni; Jang-Cheon Cho
Journal:  J Bacteriol       Date:  2010-07-16       Impact factor: 3.490

10.  Gliding motility and Por secretion system genes are widespread among members of the phylum bacteroidetes.

Authors:  Mark J McBride; Yongtao Zhu
Journal:  J Bacteriol       Date:  2012-11-02       Impact factor: 3.490
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