Literature DB >> 20472793

Genome sequences of strains HTCC2148 and HTCC2080, belonging to the OM60/NOR5 clade of the Gammaproteobacteria.

J Cameron Thrash1, Jang-Cheon Cho, Steve Ferriera, Justin Johnson, Kevin L Vergin, Stephen J Giovannoni.   

Abstract

Organisms in the OM60/NOR5 clade of the Gammaproteobacteria are ubiquitous in the world's oceans and can make up as much as 11% of bacterial cells in certain areas. Isolated from coastal Oregon water, Gammaproteobacteria HTCC2148 and HTCC2080 are two members of this important clade. Here we present the genome sequences of the OM60 Gammaproteobacteria HTCC2148 and HTCC2080.

Mesh：

Year:  2010        PMID： 20472793      PMCID： PMC2897341          DOI： 10.1128/JB.00511-10

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


  14 in total

1.  GenDB--an open source genome annotation system for prokaryote genomes.

Authors:  Folker Meyer; Alexander Goesmann; Alice C McHardy; Daniela Bartels; Thomas Bekel; Jörn Clausen; Jörn Kalinowski; Burkhard Linke; Oliver Rupp; Robert Giegerich; Alfred Pühler
Journal:  Nucleic Acids Res       Date:  2003-04-15       Impact factor: 16.971

2.  Cultivation and growth characteristics of a diverse group of oligotrophic marine Gammaproteobacteria.

Authors:  Jang-Cheon Cho; Stephen J Giovannoni
Journal:  Appl Environ Microbiol       Date:  2004-01       Impact factor: 4.792

3.  High-throughput methods for culturing microorganisms in very-low-nutrient media yield diverse new marine isolates.

Authors:  Stephanie A Connon; Stephen J Giovannoni
Journal:  Appl Environ Microbiol       Date:  2002-08       Impact factor: 4.792

4.  Improved microbial gene identification with GLIMMER.

Authors:  A L Delcher; D Harmon; S Kasif; O White; S L Salzberg
Journal:  Nucleic Acids Res       Date:  1999-12-01       Impact factor: 16.971

5.  Improvements of high-throughput culturing yielded novel SAR11 strains and other abundant marine bacteria from the Oregon coast and the Bermuda Atlantic Time Series study site.

Authors:  Ulrich Stingl; Harry James Tripp; Stephen J Giovannoni
Journal:  ISME J       Date:  2007-07-05       Impact factor: 10.302

6.  Diurnal variation of cell proliferation in three bacterial taxa from coastal North Sea waters.

Authors:  Annelie Pernthaler; Jakob Pernthaler
Journal:  Appl Environ Microbiol       Date:  2005-08       Impact factor: 4.792

7.  Isolation of novel pelagic bacteria from the German bight and their seasonal contributions to surface picoplankton.

Authors:  H Eilers; J Pernthaler; J Peplies; F O Glöckner; G Gerdts; R Amann
Journal:  Appl Environ Microbiol       Date:  2001-11       Impact factor: 4.792

8.  Characterization of a marine gammaproteobacterium capable of aerobic anoxygenic photosynthesis.

Authors:  Bernhard M Fuchs; Stefan Spring; Hanno Teeling; Christian Quast; Jörg Wulf; Martha Schattenhofer; Shi Yan; Steve Ferriera; Justin Johnson; Frank Oliver Glöckner; Rudolf Amann
Journal:  Proc Natl Acad Sci U S A       Date:  2007-02-13       Impact factor: 11.205

9.  Complete genome sequence of Robiginitalea biformata HTCC2501.

Authors:  Hyun-Myung Oh; Stephen J Giovannoni; Kiyoung Lee; Steve Ferriera; Justin Johnson; Jang-Cheon Cho
Journal:  J Bacteriol       Date:  2009-09-18       Impact factor: 3.490

10.  Polyphyletic photosynthetic reaction centre genes in oligotrophic marine Gammaproteobacteria.

Authors:  Jang-Cheon Cho; Martha D Stapels; Robert M Morris; Kevin L Vergin; Michael S Schwalbach; Scott A Givan; Douglas F Barofsky; Stephen J Giovannoni
Journal:  Environ Microbiol       Date:  2007-06       Impact factor: 5.491
View more
  9 in total

1.  Genome sequence of strain HIMB55, a novel marine gammaproteobacterium of the OM60/NOR5 clade.

Authors:  Megan J Huggett; Michael S Rappé
Journal:  J Bacteriol       Date:  2012-05       Impact factor: 3.490

2.  Genome Reconstruction from Metagenomic Data Sets Reveals Novel Microbes in the Brackish Waters of the Caspian Sea.

Authors:  Maliheh Mehrshad; Mohammad Ali Amoozegar; Rohit Ghai; Seyed Abolhassan Shahzadeh Fazeli; Francisco Rodriguez-Valera
Journal:  Appl Environ Microbiol       Date:  2016-01-04       Impact factor: 4.792

3.  Genome sequence of strain IMCC3088, a proteorhodopsin-containing marine bacterium belonging to the OM60/NOR5 clade.

Authors:  Yoonra Jang; Hyun-Myung Oh; Ilnam Kang; Kiyoung Lee; Seung-Jo Yang; Jang-Cheon Cho
Journal:  J Bacteriol       Date:  2011-05-06       Impact factor: 3.490

4.  Coassimilation of organic substrates via the autotrophic 3-hydroxypropionate bi-cycle in Chloroflexus aurantiacus.

Authors:  Jan Zarzycki; Georg Fuchs
Journal:  Appl Environ Microbiol       Date:  2011-07-15       Impact factor: 4.792

Review 5.  Catabolism of dimethylsulphoniopropionate: microorganisms, enzymes and genes.

Authors:  Andrew R J Curson; Jonathan D Todd; Matthew J Sullivan; Andrew W B Johnston
Journal:  Nat Rev Microbiol       Date:  2011-10-11       Impact factor: 60.633

6.  Ubiquitous dissolved inorganic carbon assimilation by marine bacteria in the Pacific Northwest coastal ocean as determined by stable isotope probing.

Authors:  Suzanne DeLorenzo; Suzanna L Bräuer; Chelsea A Edgmont; Lydie Herfort; Bradley M Tebo; Peter Zuber
Journal:  PLoS One       Date:  2012-10-03       Impact factor: 3.240

7.  Phylogenetic distribution, biogeography and the effects of land management upon bacterial non-specific Acid phosphatase Gene diversity and abundance.

Authors:  Andrew L Neal; Martin Blackwell; Elsy Akkari; Cervin Guyomar; Ian Clark; Penny R Hirsch
Journal:  Plant Soil       Date:  2017-06-12       Impact factor: 4.192

8.  Diversity of tryptophan halogenases in sponges of the genus Aplysina.

Authors:  Johanna Gutleben; Jasper J Koehorst; Kyle McPherson; Shirley Pomponi; René H Wijffels; Hauke Smidt; Detmer Sipkema
Journal:  FEMS Microbiol Ecol       Date:  2019-08-01       Impact factor: 4.194

9.  Taxonomy and evolution of bacteriochlorophyll a-containing members of the OM60/NOR5 clade of marine gammaproteobacteria: description of Luminiphilus syltensis gen. nov., sp. nov., reclassification of Haliea rubra as Pseudohaliea rubra gen. nov., comb. nov., and emendation of Chromatocurvus halotolerans.

Authors:  Stefan Spring; Thomas Riedel; Cathrin Spröer; Shi Yan; Jens Harder; Bernhard M Fuchs
Journal:  BMC Microbiol       Date:  2013-05-24       Impact factor: 3.605
  9 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.