Literature DB >> 19751744

eIF1 controls multiple steps in start codon recognition during eukaryotic translation initiation.

Jagpreet S Nanda1, Yuen-Nei Cheung, Julie E Takacs, Pilar Martin-Marcos, Adesh K Saini, Alan G Hinnebusch, Jon R Lorsch.   

Abstract

Eukaryotic translation initiation factor (eIF) 1 is a central mediator of start codon recognition. Dissociation of eIF1 from the preinitiation complex (PIC) allows release of phosphate from the G-protein factor eIF2, triggering downstream events in initiation. Mutations that weaken binding of eIF1 to the PIC decrease the fidelity of start codon recognition (Sui(-) phenotype) by allowing increased eIF1 release at non-AUG codons. Consistent with this, overexpression of these mutant proteins suppresses their Sui(-) phenotypes. Here, we have examined mutations at the penultimate residue of eIF1, G107, that produce Sui(-) phenotypes without increasing the rate of eIF1 release. We provide evidence that, in addition to its role in gating phosphate release, dissociation of eIF1 triggers conversion from an open, scanning-competent state of the PIC to a stable, closed one. We also show that eIF5 antagonizes binding of eIF1 to the complex and that key interactions of eIF1 with its partners are modulated by the charge at and around G107. Our data indicate that eIF1 plays multiple roles in start codon recognition and suggest that prior to AUG recognition it prevents eIF5 from binding to a key site in the PIC required for triggering downstream events.

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Year:  2009        PMID: 19751744      PMCID: PMC2783965          DOI: 10.1016/j.jmb.2009.09.017

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  40 in total

1.  A multifactor complex of eukaryotic initiation factors, eIF1, eIF2, eIF3, eIF5, and initiator tRNA(Met) is an important translation initiation intermediate in vivo.

Authors:  K Asano; J Clayton; A Shalev; A G Hinnebusch
Journal:  Genes Dev       Date:  2000-10-01       Impact factor: 11.361

2.  The yeast eIF3 subunits TIF32/a, NIP1/c, and eIF5 make critical connections with the 40S ribosome in vivo.

Authors:  Leos Valásek; Amy A Mathew; Byung-Sik Shin; Klaus H Nielsen; Béla Szamecz; Alan G Hinnebusch
Journal:  Genes Dev       Date:  2003-03-15       Impact factor: 11.361

3.  Communication between eukaryotic translation initiation factors 1 and 1A on the yeast small ribosomal subunit.

Authors:  David Maag; Jon R Lorsch
Journal:  J Mol Biol       Date:  2003-07-25       Impact factor: 5.469

4.  Development and characterization of a reconstituted yeast translation initiation system.

Authors:  Mikkel A Algire; David Maag; Peter Savio; Michael G Acker; Salvador Z Tarun; Alan B Sachs; Katsura Asano; Klaus H Nielsen; Deanne S Olsen; Lon Phan; Alan G Hinnebusch; Jon R Lorsch
Journal:  RNA       Date:  2002-03       Impact factor: 4.942

5.  The activity of eukaryotic initiation factor eIF-2 in ternary complex formation with GTP and Met-tRNA.

Authors:  R Benne; H Amesz; J W Hershey; H O Voorma
Journal:  J Biol Chem       Date:  1979-05-10       Impact factor: 5.157

6.  The roles of individual eukaryotic translation initiation factors in ribosomal scanning and initiation codon selection.

Authors:  Tatyana V Pestova; Victoria G Kolupaeva
Journal:  Genes Dev       Date:  2002-11-15       Impact factor: 11.361

7.  Interactions of eukaryotic translation initiation factor 3 (eIF3) subunit NIP1/c with eIF1 and eIF5 promote preinitiation complex assembly and regulate start codon selection.

Authors:  Leos Valásek; Klaus H Nielsen; Fan Zhang; Christie A Fekete; Alan G Hinnebusch
Journal:  Mol Cell Biol       Date:  2004-11       Impact factor: 4.272

8.  Import of proteins into mitochondria. Yeast cells grown in the presence of carbonyl cyanide m-chlorophenylhydrazone accumulate massive amounts of some mitochondrial precursor polypeptides.

Authors:  G A Reid; G Schatz
Journal:  J Biol Chem       Date:  1982-11-10       Impact factor: 5.157

9.  Efficient incorporation of eukaryotic initiation factor 1 into the multifactor complex is critical for formation of functional ribosomal preinitiation complexes in vivo.

Authors:  Chingakham Ranjit Singh; Hui He; Miki Ii; Yasufumi Yamamoto; Katsura Asano
Journal:  J Biol Chem       Date:  2004-05-15       Impact factor: 5.157

10.  Kinetic analysis of late steps of eukaryotic translation initiation.

Authors:  Michael G Acker; Byung-Sik Shin; Jagpreet S Nanda; Adesh K Saini; Thomas E Dever; Jon R Lorsch
Journal:  J Mol Biol       Date:  2008-10-19       Impact factor: 5.469

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  67 in total

1.  Initiation context modulates autoregulation of eukaryotic translation initiation factor 1 (eIF1).

Authors:  Ivaylo P Ivanov; Gary Loughran; Matthew S Sachs; John F Atkins
Journal:  Proc Natl Acad Sci U S A       Date:  2010-10-04       Impact factor: 11.205

2.  Functional elements in initiation factors 1, 1A, and 2β discriminate against poor AUG context and non-AUG start codons.

Authors:  Pilar Martin-Marcos; Yuen-Nei Cheung; Alan G Hinnebusch
Journal:  Mol Cell Biol       Date:  2011-09-19       Impact factor: 4.272

Review 3.  A mechanistic overview of translation initiation in eukaryotes.

Authors:  Colin Echeverría Aitken; Jon R Lorsch
Journal:  Nat Struct Mol Biol       Date:  2012-06-05       Impact factor: 15.369

Review 4.  Molecular view of 43 S complex formation and start site selection in eukaryotic translation initiation.

Authors:  Jon R Lorsch; Thomas E Dever
Journal:  J Biol Chem       Date:  2010-05-05       Impact factor: 5.157

5.  The C-terminal region of eukaryotic translation initiation factor 3a (eIF3a) promotes mRNA recruitment, scanning, and, together with eIF3j and the eIF3b RNA recognition motif, selection of AUG start codons.

Authors:  Wen-Ling Chiu; Susan Wagner; Anna Herrmannová; Laxminarayana Burela; Fan Zhang; Adesh K Saini; Leos Valásek; Alan G Hinnebusch
Journal:  Mol Cell Biol       Date:  2010-06-28       Impact factor: 4.272

6.  Multiple elements in the eIF4G1 N-terminus promote assembly of eIF4G1•PABP mRNPs in vivo.

Authors:  Eun-Hee Park; Sarah E Walker; Joseph M Lee; Stefan Rothenburg; Jon R Lorsch; Alan G Hinnebusch
Journal:  EMBO J       Date:  2010-12-07       Impact factor: 11.598

7.  Rli1/ABCE1 Recycles Terminating Ribosomes and Controls Translation Reinitiation in 3'UTRs In Vivo.

Authors:  David J Young; Nicholas R Guydosh; Fan Zhang; Alan G Hinnebusch; Rachel Green
Journal:  Cell       Date:  2015-08-13       Impact factor: 41.582

8.  β-Hairpin loop of eukaryotic initiation factor 1 (eIF1) mediates 40 S ribosome binding to regulate initiator tRNA(Met) recruitment and accuracy of AUG selection in vivo.

Authors:  Pilar Martin-Marcos; Jagpreet Nanda; Rafael E Luna; Gerhard Wagner; Jon R Lorsch; Alan G Hinnebusch
Journal:  J Biol Chem       Date:  2013-07-26       Impact factor: 5.157

9.  The crystal structure of the eukaryotic 40S ribosomal subunit in complex with eIF1 and eIF1A.

Authors:  Melanie Weisser; Felix Voigts-Hoffmann; Julius Rabl; Marc Leibundgut; Nenad Ban
Journal:  Nat Struct Mol Biol       Date:  2013-07-14       Impact factor: 15.369

10.  Zooming in on eukaryotic translation initiation.

Authors:  Anders Liljas
Journal:  Nat Struct Mol Biol       Date:  2013-10       Impact factor: 15.369

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