Literature DB >> 19733047

Engineering multicellular systems by cell-cell communication.

Anand Pai1, Yu Tanouchi, Cynthia H Collins, Lingchong You.   

Abstract

Synthetic biology encompasses the design of new biological parts and systems as well as the modulation of existing biological networks to generate novel functions. In recent years, increasing emphasis has been placed on the engineering of population-level behaviors using cell-cell communication. From the engineering perspective, cell-cell communication serves as a versatile regulatory module that enables coordination among cells in and between populations and facilitates the generation of reliable dynamics. In addition to exploring biological 'design principles' via the construction of increasingly complex dynamics, communication-based synthetic systems can be used as well-defined model systems to study ecological and social interactions such as competition, cooperation, and predation. Here we discuss the dynamic properties of cell-cell communication modules, how they can be engineered for synthetic circuit design, and applications of these systems.

Entities:  

Mesh:

Year:  2009        PMID: 19733047      PMCID: PMC2763981          DOI: 10.1016/j.copbio.2009.08.006

Source DB:  PubMed          Journal:  Curr Opin Biotechnol        ISSN: 0958-1669            Impact factor:   9.740


  86 in total

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Authors:  David Sprinzak; Michael B Elowitz
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2.  Synthetic ecosystems based on airborne inter- and intrakingdom communication.

Authors:  Wilfried Weber; Marie Daoud-El Baba; Martin Fussenegger
Journal:  Proc Natl Acad Sci U S A       Date:  2007-06-05       Impact factor: 11.205

3.  A whole more than the sum of its synthetic parts.

Authors:  Jeffrey V Wong; Hao Song; Lingchong You
Journal:  ACS Chem Biol       Date:  2008-01-18       Impact factor: 5.100

Review 4.  From unicellular properties to multicellular behavior: bacteria quorum sensing circuitry and applications.

Authors:  Sara Hooshangi; William E Bentley
Journal:  Curr Opin Biotechnol       Date:  2008-11-27       Impact factor: 9.740

5.  A synthetic genetic edge detection program.

Authors:  Jeffrey J Tabor; Howard M Salis; Zachary Booth Simpson; Aaron A Chevalier; Anselm Levskaya; Edward M Marcotte; Christopher A Voigt; Andrew D Ellington
Journal:  Cell       Date:  2009-06-26       Impact factor: 41.582

6.  Dynamics of formation of symmetrical patterns by chemotactic bacteria.

Authors:  E O Budrene; H C Berg
Journal:  Nature       Date:  1995-07-06       Impact factor: 49.962

7.  The quorum-sensing transcriptional regulator TraR requires its cognate signaling ligand for protein folding, protease resistance, and dimerization.

Authors:  J Zhu; S C Winans
Journal:  Proc Natl Acad Sci U S A       Date:  2001-02-13       Impact factor: 11.205

8.  Directed evolution of LuxI for enhanced OHHL production.

Authors:  Pavan Kumar Reddy Kambam; Daniel J Sayut; Yan Niu; Dawn T Eriksen; Lianhong Sun
Journal:  Biotechnol Bioeng       Date:  2008-10-01       Impact factor: 4.530

9.  Timing cellular decision making under noise via cell-cell communication.

Authors:  Aneta Koseska; Alexey Zaikin; Jürgen Kurths; Jordi García-Ojalvo
Journal:  PLoS One       Date:  2009-03-13       Impact factor: 3.240

10.  A synthetic Escherichia coli predator-prey ecosystem.

Authors:  Frederick K Balagaddé; Hao Song; Jun Ozaki; Cynthia H Collins; Matthew Barnet; Frances H Arnold; Stephen R Quake; Lingchong You
Journal:  Mol Syst Biol       Date:  2008-04-15       Impact factor: 11.429

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  15 in total

Review 1.  Foundations for the design and implementation of synthetic genetic circuits.

Authors:  Adrian L Slusarczyk; Allen Lin; Ron Weiss
Journal:  Nat Rev Genet       Date:  2012-05-18       Impact factor: 53.242

Review 2.  Programming microbial population dynamics by engineered cell-cell communication.

Authors:  Hao Song; Stephen Payne; Cheemeng Tan; Lingchong You
Journal:  Biotechnol J       Date:  2011-06-16       Impact factor: 4.677

3.  Generic metric to quantify quorum sensing activation dynamics.

Authors:  Anand Pai; Jaydeep K Srimani; Yu Tanouchi; Lingchong You
Journal:  ACS Synth Biol       Date:  2013-09-23       Impact factor: 5.110

Review 4.  Engineering biofilm formation and dispersal.

Authors:  Thomas K Wood; Seok Hoon Hong; Qun Ma
Journal:  Trends Biotechnol       Date:  2010-12-04       Impact factor: 19.536

5.  Towards a whole-cell modeling approach for synthetic biology.

Authors:  Oliver Purcell; Bonny Jain; Jonathan R Karr; Markus W Covert; Timothy K Lu
Journal:  Chaos       Date:  2013-06       Impact factor: 3.642

Review 6.  Directed evolution: an evolving and enabling synthetic biology tool.

Authors:  Ryan E Cobb; Tong Si; Huimin Zhao
Journal:  Curr Opin Chem Biol       Date:  2012-06-04       Impact factor: 8.822

7.  Directed evolution of the quorum-sensing regulator EsaR for increased signal sensitivity.

Authors:  Jasmine Shong; Yao-Ming Huang; Christopher Bystroff; Cynthia H Collins
Journal:  ACS Chem Biol       Date:  2013-02-06       Impact factor: 5.100

Review 8.  Extracellular Metabolism Sets the Table for Microbial Cross-Feeding.

Authors:  Ryan K Fritts; Alexandra L McCully; James B McKinlay
Journal:  Microbiol Mol Biol Rev       Date:  2021-01-13       Impact factor: 11.056

9.  Robust synchronization control scheme of a population of nonlinear stochastic synthetic genetic oscillators under intrinsic and extrinsic molecular noise via quorum sensing.

Authors:  Bor-Sen Chen; Chih-Yuan Hsu
Journal:  BMC Syst Biol       Date:  2012-10-26

10.  Dynamics of the quorum sensing switch: stochastic and non-stationary effects.

Authors:  Marc Weber; Javier Buceta
Journal:  BMC Syst Biol       Date:  2013-01-16
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