Literature DB >> 24011134

Generic metric to quantify quorum sensing activation dynamics.

Anand Pai1, Jaydeep K Srimani, Yu Tanouchi, Lingchong You.   

Abstract

Quorum sensing (QS) enables bacteria to sense and respond to changes in their population density. It plays a critical role in controlling different biological functions, including bioluminescence and bacterial virulence. It has also been widely adapted to program robust dynamics in one or multiple cellular populations. While QS systems across bacteria all appear to function similarly-as density-dependent control systems-there is tremendous diversity among these systems in terms of signaling components and network architectures. This diversity hampers efforts to quantify the general control properties of QS. For a specific QS module, it remains unclear how to most effectively characterize its regulatory properties in a manner that allows quantitative predictions of the activation dynamics of the target gene. Using simple kinetic models, here we show that the dominant temporal dynamics of QS-controlled target activation can be captured by a generic metric, 'sensing potential', defined at a single time point. We validate these predictions using synthetic QS circuits in Escherichia coli. Our work provides a computational framework and experimental methodology to characterize diverse natural QS systems and provides a concise yet quantitative criterion for selecting or optimizing a QS system for synthetic biology applications.

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Year:  2013        PMID: 24011134      PMCID: PMC3995131          DOI: 10.1021/sb400069w

Source DB:  PubMed          Journal:  ACS Synth Biol        ISSN: 2161-5063            Impact factor:   5.110


  35 in total

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3.  Regulation of las and rhl quorum sensing in Pseudomonas aeruginosa.

Authors:  E C Pesci; J P Pearson; P C Seed; B H Iglewski
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4.  Independent and tight regulation of transcriptional units in Escherichia coli via the LacR/O, the TetR/O and AraC/I1-I2 regulatory elements.

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Journal:  Nucleic Acids Res       Date:  1997-03-15       Impact factor: 16.971

Review 5.  P. aeruginosa quorum-sensing systems and virulence.

Authors:  Roger S Smith; Barbara H Iglewski
Journal:  Curr Opin Microbiol       Date:  2003-02       Impact factor: 7.934

6.  Parallel quorum sensing systems converge to regulate virulence in Vibrio cholerae.

Authors:  Melissa B Miller; Karen Skorupski; Derrick H Lenz; Ronald K Taylor; Bonnie L Bassler
Journal:  Cell       Date:  2002-08-09       Impact factor: 41.582

7.  N-acylhomoserine lactones undergo lactonolysis in a pH-, temperature-, and acyl chain length-dependent manner during growth of Yersinia pseudotuberculosis and Pseudomonas aeruginosa.

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Review 8.  Quorum sensing in nitrogen-fixing rhizobia.

Authors:  Juan E González; Melanie M Marketon
Journal:  Microbiol Mol Biol Rev       Date:  2003-12       Impact factor: 11.056

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Authors:  Claudia Lupp; Mark Urbanowski; E Peter Greenberg; Edward G Ruby
Journal:  Mol Microbiol       Date:  2003-10       Impact factor: 3.501

10.  Three parallel quorum-sensing systems regulate gene expression in Vibrio harveyi.

Authors:  Jennifer M Henke; Bonnie L Bassler
Journal:  J Bacteriol       Date:  2004-10       Impact factor: 3.490

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Journal:  PLoS Comput Biol       Date:  2015-06-23       Impact factor: 4.475

2.  Multi-Faceted Characterization of a Novel LuxR-Repressible Promoter Library for Escherichia coli.

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Review 3.  Can the natural diversity of quorum-sensing advance synthetic biology?

Authors:  René Michele Davis; Ryan Yue Muller; Karmella Ann Haynes
Journal:  Front Bioeng Biotechnol       Date:  2015-03-10

4.  Bacteria Floc, but Do They Flock? Insights from Population Interaction Models of Quorum Sensing.

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Journal:  mBio       Date:  2019-05-28       Impact factor: 7.867

  4 in total

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