Literature DB >> 21131080

Engineering biofilm formation and dispersal.

Thomas K Wood1, Seok Hoon Hong, Qun Ma.   

Abstract

Anywhere water is in the liquid state, bacteria will exist as biofilms, which are complex communities of cells that are cemented together. Although frequently associated with disease and biofouling, biofilms are also important for engineering applications, such as bioremediation, biocatalysis and microbial fuel cells. Here, we review approaches to alter genetic circuits and cell signaling towards controlling biofilm formation, and emphasize utilizing these tools for engineering applications. Based on a better understanding of the genetic basis of biofilm formation, we find that biofilms might be controlled by manipulating extracellular signals, and that they might be dispersed using conserved intracellular signals and regulators. Biofilms could also be formed at specific locations where they might be engineered to make chemicals or treat human disease. Copyright Â
© 2010 Elsevier Ltd. All rights reserved.

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Year:  2010        PMID: 21131080      PMCID: PMC3044331          DOI: 10.1016/j.tibtech.2010.11.001

Source DB:  PubMed          Journal:  Trends Biotechnol        ISSN: 0167-7799            Impact factor:   19.536


  74 in total

1.  Biological nanofactories facilitate spatially selective capture and manipulation of quorum sensing bacteria in a bioMEMS device.

Authors:  Rohan Fernandes; Xiaolong Luo; Chen-Yu Tsao; Gregory F Payne; Reza Ghodssi; Gary W Rubloff; William E Bentley
Journal:  Lab Chip       Date:  2010-02-16       Impact factor: 6.799

Review 2.  Biofilms: implications in bioremediation.

Authors:  Rajbir Singh; Debarati Paul; Rakesh K Jain
Journal:  Trends Microbiol       Date:  2006-07-18       Impact factor: 17.079

3.  A fatty acid messenger is responsible for inducing dispersion in microbial biofilms.

Authors:  David G Davies; Cláudia N H Marques
Journal:  J Bacteriol       Date:  2008-12-12       Impact factor: 3.490

4.  Prolonged control of patterned biofilm formation by bio-inert surface chemistry.

Authors:  Shuyu Hou; Erik A Burton; Ricky Lei Wu; Yan-Yeung Luk; Dacheng Ren
Journal:  Chem Commun (Camb)       Date:  2009-02-04       Impact factor: 6.222

Review 5.  Paradigm shift in discovering next-generation anti-infective agents: targeting quorum sensing, c-di-GMP signaling and biofilm formation in bacteria with small molecules.

Authors:  Herman O Sintim; Jacqueline A I Smith; Jingxin Wang; Shizuka Nakayama; Lei Yan
Journal:  Future Med Chem       Date:  2010-06       Impact factor: 3.808

6.  Inhibiting sulfate-reducing bacteria in biofilms on steel with antimicrobial peptides generated in situ.

Authors:  A Jayaraman; P J Hallock; R M Carson; C C Lee; F B Mansfeld; T K Wood
Journal:  Appl Microbiol Biotechnol       Date:  1999-08       Impact factor: 4.813

7.  YdgG (TqsA) controls biofilm formation in Escherichia coli K-12 through autoinducer 2 transport.

Authors:  Moshe Herzberg; Ian K Kaye; Wolfgang Peti; Thomas K Wood
Journal:  J Bacteriol       Date:  2006-01       Impact factor: 3.490

8.  Localized gene expression in Pseudomonas aeruginosa biofilms.

Authors:  Ailyn P Lenz; Kerry S Williamson; Betsey Pitts; Philip S Stewart; Michael J Franklin
Journal:  Appl Environ Microbiol       Date:  2008-05-16       Impact factor: 4.792

Review 9.  Epidemiology of urinary tract infections: incidence, morbidity, and economic costs.

Authors:  Betsy Foxman
Journal:  Am J Med       Date:  2002-07-08       Impact factor: 4.965

10.  Protein translation and cell death: the role of rare tRNAs in biofilm formation and in activating dormant phage killer genes.

Authors:  Rodolfo García-Contreras; Xue-Song Zhang; Younghoon Kim; Thomas K Wood
Journal:  PLoS One       Date:  2008-06-11       Impact factor: 3.240

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  28 in total

1.  Localized cell death focuses mechanical forces during 3D patterning in a biofilm.

Authors:  Munehiro Asally; Mark Kittisopikul; Pau Rué; Yingjie Du; Zhenxing Hu; Tolga Çağatay; Andra B Robinson; Hongbing Lu; Jordi Garcia-Ojalvo; Gürol M Süel
Journal:  Proc Natl Acad Sci U S A       Date:  2012-09-24       Impact factor: 11.205

Review 2.  Toxin-antitoxin systems influence biofilm and persister cell formation and the general stress response.

Authors:  Xiaoxue Wang; Thomas K Wood
Journal:  Appl Environ Microbiol       Date:  2011-06-17       Impact factor: 4.792

Review 3.  Advances in the treatment of problematic industrial biofilms.

Authors:  D Xu; R Jia; Y Li; T Gu
Journal:  World J Microbiol Biotechnol       Date:  2017-04-13       Impact factor: 3.312

Review 4.  Environmental proteomic studies: closer step to understand bacterial biofilms.

Authors:  Anupama Rani; Subramanian Babu
Journal:  World J Microbiol Biotechnol       Date:  2018-07-18       Impact factor: 3.312

Review 5.  Bacterial biofilms: development, dispersal, and therapeutic strategies in the dawn of the postantibiotic era.

Authors:  Maria Kostakioti; Maria Hadjifrangiskou; Scott J Hultgren
Journal:  Cold Spring Harb Perspect Med       Date:  2013-04-01       Impact factor: 6.915

6.  Enhanced uranium immobilization and reduction by Geobacter sulfurreducens biofilms.

Authors:  Dena L Cologgi; Allison M Speers; Blair A Bullard; Shelly D Kelly; Gemma Reguera
Journal:  Appl Environ Microbiol       Date:  2014-08-15       Impact factor: 4.792

Review 7.  Microfluidic Studies of Biofilm Formation in Dynamic Environments.

Authors:  Yutaka Yawata; Jen Nguyen; Roman Stocker; Roberto Rusconi
Journal:  J Bacteriol       Date:  2016-09-09       Impact factor: 3.490

Review 8.  Microbial biofilm ecology, in silico study of quorum sensing receptor-ligand interactions and biofilm mediated bioremediation.

Authors:  Biji Balan; Amit S Dhaulaniya; Diksha A Varma; Kushneet K Sodhi; Mohit Kumar; Manisha Tiwari; Dileep Kumar Singh
Journal:  Arch Microbiol       Date:  2020-08-12       Impact factor: 2.552

Review 9.  Cyclic di-GMP: the first 25 years of a universal bacterial second messenger.

Authors:  Ute Römling; Michael Y Galperin; Mark Gomelsky
Journal:  Microbiol Mol Biol Rev       Date:  2013-03       Impact factor: 11.056

10.  The regulatory TnaC nascent peptide preferentially inhibits release factor 2-mediated hydrolysis of peptidyl-tRNA.

Authors:  Jerusha Salome Emmanuel; Arnab Sengupta; Emily Roth Gordon; Joseph Thomas Noble; Luis Rogelio Cruz-Vera
Journal:  J Biol Chem       Date:  2019-11-11       Impact factor: 5.157

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