Literature DB >> 19694286

Inverse-consistent surface mapping with Laplace-Beltrami eigen-features.

Yonggang Shi1, Jonathan H Morra, Paul M Thompson, Arthur W Toga.   

Abstract

We propose in this work a novel variational method for computing maps between surfaces by combining informative geometric features and regularizing forces including inverse consistency and harmonic energy. To tackle the ambiguity in defining homologous points on smooth surfaces, we design feature functions in the data term based on the Reeb graph of the Laplace-Beltrami eigenfunctions to quantitatively describe the global geometry of elongated anatomical structures. For inverse consistency and robustness, our method computes simultaneously the forward and backward map by iteratively solving partial differential equations (PDEs) on the surfaces. In our experiments, we successfully mapped 890 hippocampal surfaces and report statistically significant maps of atrophy rates between normal controls and patients with mild cognitive impairment (MCI) and Alzheimer's disease (AD).

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Year:  2009        PMID: 19694286      PMCID: PMC2970526          DOI: 10.1007/978-3-642-02498-6_39

Source DB:  PubMed          Journal:  Inf Process Med Imaging        ISSN: 1011-2499


  15 in total

1.  Genus zero surface conformal mapping and its application to brain surface mapping.

Authors:  Xianfeng Gu; Yalin Wang; Tony F Chan; Paul M Thompson; Shing-Tung Yau
Journal:  IEEE Trans Med Imaging       Date:  2004-08       Impact factor: 10.048

2.  Shape discrimination in the hippocampus using an MDL model.

Authors:  Rhodri H Davies; Carole J Twining; P Daniel Allen; Tim F Cootes; Chris J Taylor
Journal:  Inf Process Med Imaging       Date:  2003-07

3.  Continuous medial representation for anatomical structures.

Authors:  Paul A Yushkevich; Hui Zhang; James C Gee
Journal:  IEEE Trans Med Imaging       Date:  2006-12       Impact factor: 10.048

4.  Deformable templates using large deformation kinematics.

Authors:  G E Christensen; R D Rabbitt; M I Miller
Journal:  IEEE Trans Image Process       Date:  1996       Impact factor: 10.856

5.  Landmark matching via large deformation diffeomorphisms.

Authors:  S C Joshi; M I Miller
Journal:  IEEE Trans Image Process       Date:  2000       Impact factor: 10.856

6.  Validation of a fully automated 3D hippocampal segmentation method using subjects with Alzheimer's disease mild cognitive impairment, and elderly controls.

Authors:  Jonathan H Morra; Zhuowen Tu; Liana G Apostolova; Amity E Green; Christina Avedissian; Sarah K Madsen; Neelroop Parikshak; Xue Hua; Arthur W Toga; Clifford R Jack; Michael W Weiner; Paul M Thompson
Journal:  Neuroimage       Date:  2008-07-16       Impact factor: 6.556

7.  Statistical shape analysis of neuroanatomical structures based on medial models.

Authors:  M Styner; G Gerig; J Lieberman; D Jones; D Weinberger
Journal:  Med Image Anal       Date:  2003-09       Impact factor: 8.545

Review 8.  The Alzheimer's disease neuroimaging initiative.

Authors:  Susanne G Mueller; Michael W Weiner; Leon J Thal; Ronald C Petersen; Clifford Jack; William Jagust; John Q Trojanowski; Arthur W Toga; Laurel Beckett
Journal:  Neuroimaging Clin N Am       Date:  2005-11       Impact factor: 2.264

9.  Mapping hippocampal and ventricular change in Alzheimer disease.

Authors:  Paul M Thompson; Kiralee M Hayashi; Greig I De Zubicaray; Andrew L Janke; Stephen E Rose; James Semple; Michael S Hong; David H Herman; David Gravano; David M Doddrell; Arthur W Toga
Journal:  Neuroimage       Date:  2004-08       Impact factor: 6.556

10.  Direct mapping of hippocampal surfaces with intrinsic shape context.

Authors:  Yonggang Shi; Paul M Thompson; Greig I de Zubicaray; Stephen E Rose; Zhuowen Tu; Ivo Dinov; Arthur W Toga
Journal:  Neuroimage       Date:  2007-05-23       Impact factor: 6.556

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  25 in total

1.  The Center for Computational Biology: resources, achievements, and challenges.

Authors:  Arthur W Toga; Ivo D Dinov; Paul M Thompson; Roger P Woods; John D Van Horn; David W Shattuck; D Stott Parker
Journal:  J Am Med Inform Assoc       Date:  2011-11-10       Impact factor: 4.497

2.  Learning task-optimal registration cost functions for localizing cytoarchitecture and function in the cerebral cortex.

Authors:  B T Thomas Yeo; Mert R Sabuncu; Tom Vercauteren; Daphne J Holt; Katrin Amunts; Karl Zilles; Polina Golland; Bruce Fischl
Journal:  IEEE Trans Med Imaging       Date:  2010-06-07       Impact factor: 10.048

3.  Metric optimization for surface analysis in the Laplace-Beltrami embedding space.

Authors:  Yonggang Shi; Rongjie Lai; Danny J J Wang; Daniel Pelletier; David Mohr; Nancy Sicotte; Arthur W Toga
Journal:  IEEE Trans Med Imaging       Date:  2014-03-25       Impact factor: 10.048

4.  Automated sulci identification via intrinsic modeling of cortical anatomy.

Authors:  Yonggang Shi; Bo Sun; Rongjie Lai; Ivo Dinov; Arthur W Toga
Journal:  Med Image Comput Comput Assist Interv       Date:  2010

5.  Estimation of three-dimensional intrinsic dosimetric uncertainties resulting from using deformable image registration for dose mapping.

Authors:  Francisco J Salguero; Nahla K Saleh-Sayah; Chenyu Yan; Jeffrey V Siebers
Journal:  Med Phys       Date:  2011-01       Impact factor: 4.071

6.  Hippocampal Shape Maturation in Childhood and Adolescence.

Authors:  Kirsten M Lynch; Yonggang Shi; Arthur W Toga; Kristi A Clark
Journal:  Cereb Cortex       Date:  2019-08-14       Impact factor: 5.357

7.  Robust surface reconstruction via Laplace-Beltrami eigen-projection and boundary deformation.

Authors:  Yonggang Shi; Rongjie Lai; Jonathan H Morra; Ivo Dinov; Paul M Thompson; Arthur W Toga
Journal:  IEEE Trans Med Imaging       Date:  2010-07-12       Impact factor: 10.048

8.  Surface fluid registration of conformal representation: application to detect disease burden and genetic influence on hippocampus.

Authors:  Jie Shi; Paul M Thompson; Boris Gutman; Yalin Wang
Journal:  Neuroimage       Date:  2013-04-13       Impact factor: 6.556

9.  Multivariate tensor-based morphometry on surfaces: application to mapping ventricular abnormalities in HIV/AIDS.

Authors:  Yalin Wang; Jie Zhang; Boris Gutman; Tony F Chan; James T Becker; Howard J Aizenstein; Oscar L Lopez; Robert J Tamburo; Arthur W Toga; Paul M Thompson
Journal:  Neuroimage       Date:  2009-11-06       Impact factor: 6.556

10.  Detection of altered hippocampal morphology in multiple sclerosis-associated depression using automated surface mesh modeling.

Authors:  Stefan M Gold; Mary-Frances O'Connor; Raja Gill; Kyle C Kern; Yonggang Shi; Roland G Henry; Daniel Pelletier; David C Mohr; Nancy L Sicotte
Journal:  Hum Brain Mapp       Date:  2012-07-30       Impact factor: 5.038

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