Literature DB >> 19900560

Multivariate tensor-based morphometry on surfaces: application to mapping ventricular abnormalities in HIV/AIDS.

Yalin Wang1, Jie Zhang, Boris Gutman, Tony F Chan, James T Becker, Howard J Aizenstein, Oscar L Lopez, Robert J Tamburo, Arthur W Toga, Paul M Thompson.   

Abstract

Here we developed a new method, called multivariate tensor-based surface morphometry (TBM), and applied it to study lateral ventricular surface differences associated with HIV/AIDS. Using concepts from differential geometry and the theory of differential forms, we created mathematical structures known as holomorphic one-forms, to obtain an efficient and accurate conformal parameterization of the lateral ventricular surfaces in the brain. The new meshing approach also provides a natural way to register anatomical surfaces across subjects, and improves on prior methods as it handles surfaces that branch and join at complex 3D junctions. To analyze anatomical differences, we computed new statistics from the Riemannian surface metrics-these retain multivariate information on local surface geometry. We applied this framework to analyze lateral ventricular surface morphometry in 3D MRI data from 11 subjects with HIV/AIDS and 8 healthy controls. Our method detected a 3D profile of surface abnormalities even in this small sample. Multivariate statistics on the local tensors gave better effect sizes for detecting group differences, relative to other TBM-based methods including analysis of the Jacobian determinant, the largest and smallest eigenvalues of the surface metric, and the pair of eigenvalues of the Jacobian matrix. The resulting analysis pipeline may improve the power of surface-based morphometry studies of the brain. Copyright (c) 2009 Elsevier Inc. All rights reserved.

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Year:  2009        PMID: 19900560      PMCID: PMC2859967          DOI: 10.1016/j.neuroimage.2009.10.086

Source DB:  PubMed          Journal:  Neuroimage        ISSN: 1053-8119            Impact factor:   6.556


  54 in total

1.  Morphometric analysis of lateral ventricles in schizophrenia and healthy controls regarding genetic and disease-specific factors.

Authors:  Martin Styner; Jeffrey A Lieberman; Robert K McClure; Daniel R Weinberger; Douglas W Jones; Guido Gerig
Journal:  Proc Natl Acad Sci U S A       Date:  2005-03-16       Impact factor: 11.205

2.  Log-Euclidean metrics for fast and simple calculus on diffusion tensors.

Authors:  Vincent Arsigny; Pierre Fillard; Xavier Pennec; Nicholas Ayache
Journal:  Magn Reson Med       Date:  2006-08       Impact factor: 4.668

3.  Cerebral ventricular changes associated with transitions between normal cognitive function, mild cognitive impairment, and dementia.

Authors:  Owen T Carmichael; Lewis H Kuller; Oscar L Lopez; Paul M Thompson; Rebecca A Dutton; Allen Lu; Sharon E Lee; Jessica Y Lee; Howard J Aizenstein; Carolyn C Meltzer; Yanxi Liu; Arthur W Toga; James T Becker
Journal:  Alzheimer Dis Assoc Disord       Date:  2007 Jan-Mar       Impact factor: 2.703

4.  A landmark-based brain conformal parametrization with automatic landmark tracking technique.

Authors:  Lok Ming Lui; Yalin Wang; Tony F Chan; Paul M Thompson
Journal:  Med Image Comput Comput Assist Interv       Date:  2006

5.  Automated mapping of hippocampal atrophy in 1-year repeat MRI data from 490 subjects with Alzheimer's disease, mild cognitive impairment, and elderly controls.

Authors:  Jonathan H Morra; Zhuowen Tu; Liana G Apostolova; Amity E Green; Christina Avedissian; Sarah K Madsen; Neelroop Parikshak; Arthur W Toga; Clifford R Jack; Norbert Schuff; Michael W Weiner; Paul M Thompson
Journal:  Neuroimage       Date:  2008-11-08       Impact factor: 6.556

6.  Conformal slit mapping and its applications to brain surface parameterization.

Authors:  Yalin Wang; Xianfeng Gu; Tony F Chan; Paul M Thompson; Shing-Tung Yau
Journal:  Med Image Comput Comput Assist Interv       Date:  2008

7.  Discrete conformal methods for cortical brain flattening.

Authors:  Monica K Hurdal; Ken Stephenson
Journal:  Neuroimage       Date:  2008-11-11       Impact factor: 6.556

8.  MMSE scores correlate with local ventricular enlargement in the spectrum from cognitively normal to Alzheimer disease.

Authors:  Luca Ferrarini; Walter M Palm; Hans Olofsen; Roald van der Landen; Gerard Jan Blauw; Rudi G J Westendorp; Eduard L E M Bollen; Huub A M Middelkoop; Johan H C Reiber; Mark A van Buchem; Faiza Admiraal-Behloul
Journal:  Neuroimage       Date:  2007-11-17       Impact factor: 6.556

9.  Time-lapse mapping of cortical changes in schizophrenia with different treatments.

Authors:  Paul M Thompson; George Bartzokis; Kiralee M Hayashi; Andrea D Klunder; Po H Lu; Nancy Edwards; Michael S Hong; Michael Yu; Jennifer A Geaga; Arthur W Toga; Cecil Charles; Diana O Perkins; Joseph McEvoy; Robert M Hamer; Mauricio Tohen; Gary D Tollefson; Jeffrey A Lieberman
Journal:  Cereb Cortex       Date:  2008-10-08       Impact factor: 5.357

10.  Mapping brain abnormalities in boys with autism.

Authors:  Caroline C Brun; Rob Nicolson; Natasha Leporé; Yi-Yu Chou; Christine N Vidal; Timothy J DeVito; Dick J Drost; Peter C Williamson; Nagalingam Rajakumar; Arthur W Toga; Paul M Thompson
Journal:  Hum Brain Mapp       Date:  2009-12       Impact factor: 5.038

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  51 in total

1.  Thalamic alterations in preterm neonates and their relation to ventral striatum disturbances revealed by a combined shape and pose analysis.

Authors:  Yi Lao; Yalin Wang; Jie Shi; Rafael Ceschin; Marvin D Nelson; Ashok Panigrahy; Natasha Leporé
Journal:  Brain Struct Funct       Date:  2014-11-01       Impact factor: 3.270

Review 2.  The role of medical imaging in defining CNS abnormalities associated with HIV-infection and opportunistic infections.

Authors:  David F Tate; Rola Khedraki; Daniel McCaffrey; Daniel Branson; Jeffrey Dewey
Journal:  Neurotherapeutics       Date:  2011-01       Impact factor: 7.620

3.  Topological correction of brain surface meshes using spherical harmonics.

Authors:  Rachel Aine Yotter; Robert Dahnke; Paul M Thompson; Christian Gaser
Journal:  Hum Brain Mapp       Date:  2010-07-27       Impact factor: 5.038

Review 4.  Novel Neuroimaging Methods to Understand How HIV Affects the Brain.

Authors:  Paul M Thompson; Neda Jahanshad
Journal:  Curr HIV/AIDS Rep       Date:  2015-06       Impact factor: 5.071

5.  Discriminating lung adenocarcinoma from lung squamous cell carcinoma using respiration-induced tumor shape changes.

Authors:  Yi Lao; John David; Amin Mirhadi; Natasha Lepore; Howard Sandler; Yalin Wang; Richard Tuli; Wensha Yang
Journal:  Phys Med Biol       Date:  2018-11-07       Impact factor: 3.609

6.  Impact of Early and Late Visual Deprivation on the Structure of the Corpus Callosum: A Study Combining Thickness Profile with Surface Tensor-Based Morphometry.

Authors:  Natasha Leporé; Yalin Wang; Jie Shi; Olivier Collignon; Liang Xu; Gang Wang; Yue Kang; Franco Leporé; Yi Lao; Anand A Joshi
Journal:  Neuroinformatics       Date:  2015-07

7.  Putamen Development in Children 12 to 21 Months Old.

Authors:  Roza Vlasova; Niharika Gajawelli; Yalin Wang; Holly Dirks; Douglas Dean; Jonathan O'Muircheartaigh; Yi Lao; James Yoon; Marvin D Nelson; Sean Deoni; Natasha Lepore
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2017-01-26

8.  Multivariate surface-based analysis of corpus callosum in patients with sickle cell disease.

Authors:  Yaqiong Chai; Yi Lao; Yicen Li; Chaoran Ji; Sharon O'Neil; Yalin Wang; Natasha Lepore; John Wood
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2017-01-26

9.  Ventricular maps in 804 ADNI subjects: correlations with CSF biomarkers and clinical decline.

Authors:  Yi-Yu Chou; Natasha Leporé; Priyanka Saharan; Sarah K Madsen; Xue Hua; Clifford R Jack; Leslie M Shaw; John Q Trojanowski; Michael W Weiner; Arthur W Toga; Paul M Thompson
Journal:  Neurobiol Aging       Date:  2010-08       Impact factor: 4.673

10.  Surface fluid registration of conformal representation: application to detect disease burden and genetic influence on hippocampus.

Authors:  Jie Shi; Paul M Thompson; Boris Gutman; Yalin Wang
Journal:  Neuroimage       Date:  2013-04-13       Impact factor: 6.556

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