Literature DB >> 23587689

Surface fluid registration of conformal representation: application to detect disease burden and genetic influence on hippocampus.

Jie Shi1, Paul M Thompson, Boris Gutman, Yalin Wang.   

Abstract

In this paper, we develop a new automated surface registration system based on surface conformal parameterization by holomorphic 1-forms, inverse consistent surface fluid registration, and multivariate tensor-based morphometry (mTBM). First, we conformally map a surface onto a planar rectangle space with holomorphic 1-forms. Second, we compute surface conformal representation by combining its local conformal factor and mean curvature and linearly scale the dynamic range of the conformal representation to form the feature image of the surface. Third, we align the feature image with a chosen template image via the fluid image registration algorithm, which has been extended into the curvilinear coordinates to adjust for the distortion introduced by surface parameterization. The inverse consistent image registration algorithm is also incorporated in the system to jointly estimate the forward and inverse transformations between the study and template images. This alignment induces a corresponding deformation on the surface. We tested the system on Alzheimer's Disease Neuroimaging Initiative (ADNI) baseline dataset to study AD symptoms on hippocampus. In our system, by modeling a hippocampus as a 3D parametric surface, we nonlinearly registered each surface with a selected template surface. Then we used mTBM to analyze the morphometry difference between diagnostic groups. Experimental results show that the new system has better performance than two publicly available subcortical surface registration tools: FIRST and SPHARM. We also analyzed the genetic influence of the Apolipoprotein E[element of]4 allele (ApoE4), which is considered as the most prevalent risk factor for AD. Our work successfully detected statistically significant difference between ApoE4 carriers and non-carriers in both patients of mild cognitive impairment (MCI) and healthy control subjects. The results show evidence that the ApoE genotype may be associated with accelerated brain atrophy so that our work provides a new MRI analysis tool that may help presymptomatic AD research.
Copyright © 2013 Elsevier Inc. All rights reserved.

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Year:  2013        PMID: 23587689      PMCID: PMC3683848          DOI: 10.1016/j.neuroimage.2013.04.018

Source DB:  PubMed          Journal:  Neuroimage        ISSN: 1053-8119            Impact factor:   6.556


  143 in total

1.  Segmentation, registration, and measurement of shape variation via image object shape.

Authors:  S M Pizer; D S Fritsch; P A Yushkevich; V E Johnson; E L Chaney
Journal:  IEEE Trans Med Imaging       Date:  1999-10       Impact factor: 10.048

2.  Nonrigid registration using free-form deformations: application to breast MR images.

Authors:  D Rueckert; L I Sonoda; C Hayes; D L Hill; M O Leach; D J Hawkes
Journal:  IEEE Trans Med Imaging       Date:  1999-08       Impact factor: 10.048

3.  A unified statistical approach to deformation-based morphometry.

Authors:  M K Chung; K J Worsley; T Paus; C Cherif; D L Collins; J N Giedd; J L Rapoport; A C Evans
Journal:  Neuroimage       Date:  2001-09       Impact factor: 6.556

4.  An integrated software suite for surface-based analyses of cerebral cortex.

Authors:  D C Van Essen; H A Drury; J Dickson; J Harwell; D Hanlon; C H Anderson
Journal:  J Am Med Inform Assoc       Date:  2001 Sep-Oct       Impact factor: 4.497

5.  Consistent image registration.

Authors:  G E Christensen; H J Johnson
Journal:  IEEE Trans Med Imaging       Date:  2001-07       Impact factor: 10.048

6.  Correlation between rates of brain atrophy and cognitive decline in AD.

Authors:  N C Fox; R I Scahill; W R Crum; M N Rossor
Journal:  Neurology       Date:  1999-05-12       Impact factor: 9.910

7.  Statistical analysis of normal and abnormal dissymmetry in volumetric medical images.

Authors:  J P Thirion; S Prima; G Subsol; N Roberts
Journal:  Med Image Anal       Date:  2000-06       Impact factor: 8.545

8.  APOE-epsilon4 is associated with less frontal and more medial temporal lobe atrophy in AD.

Authors:  C Geroldi; M Pihlajamäki; M P Laakso; C DeCarli; A Beltramello; A Bianchetti; H Soininen; M Trabucchi; G B Frisoni
Journal:  Neurology       Date:  1999-11-10       Impact factor: 9.910

9.  Growth patterns in the developing brain detected by using continuum mechanical tensor maps.

Authors:  P M Thompson; J N Giedd; R P Woods; D MacDonald; A C Evans; A W Toga
Journal:  Nature       Date:  2000-03-09       Impact factor: 49.962

10.  Apolipoprotein E epsilon 4 and the pattern of regional brain atrophy in Alzheimer's disease.

Authors:  M Hashimoto; M Yasuda; S Tanimukai; M Matsui; N Hirono; H Kazui; E Mori
Journal:  Neurology       Date:  2001-10-23       Impact factor: 9.910

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  45 in total

1.  Morphological changes in subregions of hippocampus and amygdala in major depressive disorder patients.

Authors:  Zhijun Yao; Yu Fu; Jianfeng Wu; Wenwen Zhang; Yue Yu; Zicheng Zhang; Xia Wu; Yalin Wang; Bin Hu
Journal:  Brain Imaging Behav       Date:  2020-06       Impact factor: 3.978

2.  Individual subject classification of mixed dementia from pure subcortical vascular dementia based on subcortical shape analysis.

Authors:  Hee Jin Kim; Jeonghun Kim; Hanna Cho; Byoung Seok Ye; Cindy W Yoon; Young Noh; Geon Ha Kim; Jae Hong Lee; Jae Seung Kim; Yearn Seong Choe; Kyung-Han Lee; Chang-Hun Kim; Sang Won Seo; Michael W Weiner; Duk L Na; Joon-Kyung Seong
Journal:  PLoS One       Date:  2013-10-10       Impact factor: 3.240

3.  Discriminating lung adenocarcinoma from lung squamous cell carcinoma using respiration-induced tumor shape changes.

Authors:  Yi Lao; John David; Amin Mirhadi; Natasha Lepore; Howard Sandler; Yalin Wang; Richard Tuli; Wensha Yang
Journal:  Phys Med Biol       Date:  2018-11-07       Impact factor: 3.609

4.  Impact of Early and Late Visual Deprivation on the Structure of the Corpus Callosum: A Study Combining Thickness Profile with Surface Tensor-Based Morphometry.

Authors:  Natasha Leporé; Yalin Wang; Jie Shi; Olivier Collignon; Liang Xu; Gang Wang; Yue Kang; Franco Leporé; Yi Lao; Anand A Joshi
Journal:  Neuroinformatics       Date:  2015-07

5.  Abnormal Ventricular Development in Preterm Neonates with Visually Normal MRIs.

Authors:  Jie Shi; Yalin Wang; Yi Lao; Rafael Ceschin; Liang Mi; Marvin D Nelson; Ashok Panigrahy; Natasha Leporé
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2015-11-22

6.  Structural Plasticity of the Hippocampus and Amygdala Induced by Electroconvulsive Therapy in Major Depression.

Authors:  Shantanu H Joshi; Randall T Espinoza; Tara Pirnia; Jie Shi; Yalin Wang; Brandon Ayers; Amber Leaver; Roger P Woods; Katherine L Narr
Journal:  Biol Psychiatry       Date:  2015-03-05       Impact factor: 13.382

7.  Genetics and brain morphology.

Authors:  Lachlan T Strike; Baptiste Couvy-Duchesne; Narelle K Hansell; Gabriel Cuellar-Partida; Sarah E Medland; Margaret J Wright
Journal:  Neuropsychol Rev       Date:  2015-03-14       Impact factor: 7.444

8.  FGWAS: Functional genome wide association analysis.

Authors:  Chao Huang; Paul Thompson; Yalin Wang; Yang Yu; Jingwen Zhang; Dehan Kong; Rivka R Colen; Rebecca C Knickmeyer; Hongtu Zhu
Journal:  Neuroimage       Date:  2017-07-20       Impact factor: 6.556

9.  Functional joint model for longitudinal and time-to-event data: an application to Alzheimer's disease.

Authors:  Kan Li; Sheng Luo
Journal:  Stat Med       Date:  2017-06-30       Impact factor: 2.373

10.  APPLYING SPARSE CODING TO SURFACE MULTIVARIATE TENSOR-BASED MORPHOMETRY TO PREDICT FUTURE COGNITIVE DECLINE.

Authors:  Jie Zhang; Cynthia Stonnington; Qingyang Li; Jie Shi; Robert J Bauer; Boris A Gutman; Kewei Chen; Eric M Reiman; Paul M Thompson; Jieping Ye; Yalin Wang
Journal:  Proc IEEE Int Symp Biomed Imaging       Date:  2016-04
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