Literature DB >> 19668194

Cell-selective metabolic labeling of proteins.

John T Ngo1, Julie A Champion, Alborz Mahdavi, I Caglar Tanrikulu, Kimberly E Beatty, Rebecca E Connor, Tae Hyeon Yoo, Daniela C Dieterich, Erin M Schuman, David A Tirrell.   

Abstract

Metabolic labeling of proteins with the methionine surrogate azidonorleucine can be targeted exclusively to specified cells through expression of a mutant methionyl-tRNA synthetase (MetRS). In complex cellular mixtures, proteins made in cells that express the mutant synthetase can be tagged with affinity reagents (for detection or enrichment) or fluorescent dyes (for imaging). Proteins made in cells that do not express the mutant synthetase are neither labeled nor detected.

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Year:  2009        PMID: 19668194      PMCID: PMC3176724          DOI: 10.1038/nchembio.200

Source DB:  PubMed          Journal:  Nat Chem Biol        ISSN: 1552-4450            Impact factor:   15.040


  12 in total

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Journal:  Angew Chem Int Ed Engl       Date:  2002-03-15       Impact factor: 15.336

2.  Interactions between commensal intestinal bacteria and the immune system.

Authors:  Andrew J Macpherson; Nicola L Harris
Journal:  Nat Rev Immunol       Date:  2004-06       Impact factor: 53.106

Review 3.  Metabolic labeling of proteins for proteomics.

Authors:  Robert J Beynon; Julie M Pratt
Journal:  Mol Cell Proteomics       Date:  2005-04-22       Impact factor: 5.911

Review 4.  Functional and quantitative proteomics using SILAC.

Authors:  Matthias Mann
Journal:  Nat Rev Mol Cell Biol       Date:  2006-12       Impact factor: 94.444

Review 5.  Chemistry in living systems.

Authors:  Jennifer A Prescher; Carolyn R Bertozzi
Journal:  Nat Chem Biol       Date:  2005-06       Impact factor: 15.040

6.  Fluorescence visualization of newly synthesized proteins in mammalian cells.

Authors:  Kimberly E Beatty; Julie C Liu; Fang Xie; Daniela C Dieterich; Erin M Schuman; Qian Wang; David A Tirrell
Journal:  Angew Chem Int Ed Engl       Date:  2006-11-13       Impact factor: 15.336

7.  Discovery of aminoacyl-tRNA synthetase activity through cell-surface display of noncanonical amino acids.

Authors:  A James Link; Mandy K S Vink; Nicholas J Agard; Jennifer A Prescher; Carolyn R Bertozzi; David A Tirrell
Journal:  Proc Natl Acad Sci U S A       Date:  2006-06-26       Impact factor: 11.205

8.  Selective dye-labeling of newly synthesized proteins in bacterial cells.

Authors:  Kimberly E Beatty; Fang Xie; Qian Wang; David A Tirrell
Journal:  J Am Chem Soc       Date:  2005-10-19       Impact factor: 15.419

9.  Labeling, detection and identification of newly synthesized proteomes with bioorthogonal non-canonical amino-acid tagging.

Authors:  Daniela C Dieterich; Jennifer J Lee; A James Link; Johannes Graumann; David A Tirrell; Erin M Schuman
Journal:  Nat Protoc       Date:  2007       Impact factor: 13.491

10.  Peptidotriazoles on solid phase: [1,2,3]-triazoles by regiospecific copper(i)-catalyzed 1,3-dipolar cycloadditions of terminal alkynes to azides.

Authors:  Christian W Tornøe; Caspar Christensen; Morten Meldal
Journal:  J Org Chem       Date:  2002-05-03       Impact factor: 4.354

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  76 in total

1.  Dynamic metabolic labeling of DNA in vivo with arabinosyl nucleosides.

Authors:  Anne B Neef; Nathan W Luedtke
Journal:  Proc Natl Acad Sci U S A       Date:  2011-12-05       Impact factor: 11.205

2.  Neuronal protein economics: keeping tabs on synthesis.

Authors:  Pablo Ariel; Timothy A Ryan
Journal:  Nat Neurosci       Date:  2010-07       Impact factor: 24.884

Review 3.  Residue-specific incorporation of non-canonical amino acids into proteins: recent developments and applications.

Authors:  Jeremiah A Johnson; Ying Y Lu; James A Van Deventer; David A Tirrell
Journal:  Curr Opin Chem Biol       Date:  2010-11-09       Impact factor: 8.822

Review 4.  Proteomics of the Synapse--A Quantitative Approach to Neuronal Plasticity.

Authors:  Daniela C Dieterich; Michael R Kreutz
Journal:  Mol Cell Proteomics       Date:  2015-08-25       Impact factor: 5.911

Review 5.  Cell-selective proteomics for biological discovery.

Authors:  Shannon E Stone; Weslee S Glenn; Graham D Hamblin; David A Tirrell
Journal:  Curr Opin Chem Biol       Date:  2017-01-12       Impact factor: 8.822

Review 6.  Optimizing non-natural protein function with directed evolution.

Authors:  Eric M Brustad; Frances H Arnold
Journal:  Curr Opin Chem Biol       Date:  2010-12-23       Impact factor: 8.822

Review 7.  Proteostasis in complex dendrites.

Authors:  Cyril Hanus; Erin M Schuman
Journal:  Nat Rev Neurosci       Date:  2013-07-31       Impact factor: 34.870

8.  Quantifying Current Events Identifies a Novel Endurance Regulator.

Authors:  Theresa C Henry; Mark P Brynildsen
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Review 9.  The Growing Toolbox for Protein Synthesis Studies.

Authors:  Shintaro Iwasaki; Nicholas T Ingolia
Journal:  Trends Biochem Sci       Date:  2017-05-28       Impact factor: 13.807

10.  Discrimination of colon cancer stem cells using noncanonical amino acid.

Authors:  Xinrui Duan; Honglin Li; Hexin Chen; Qian Wang
Journal:  Chem Commun (Camb)       Date:  2012-07-30       Impact factor: 6.222

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