Literature DB >> 16407987

Chemistry in living systems.

Jennifer A Prescher1, Carolyn R Bertozzi.   

Abstract

Dissecting complex cellular processes requires the ability to track biomolecules as they function within their native habitat. Although genetically encoded tags such as GFP are widely used to monitor discrete proteins, they can cause significant perturbations to a protein's structure and have no direct extension to other classes of biomolecules such as glycans, lipids, nucleic acids and secondary metabolites. In recent years, an alternative tool for tagging biomolecules has emerged from the chemical biology community--the bioorthogonal chemical reporter. In a prototypical experiment, a unique chemical motif, often as small as a single functional group, is incorporated into the target biomolecule using the cell's own biosynthetic machinery. The chemical reporter is then covalently modified in a highly selective fashion with an exogenously delivered probe. This review highlights the development of bioorthogonal chemical reporters and reactions and their application in living systems.

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Year:  2005        PMID: 16407987     DOI: 10.1038/nchembio0605-13

Source DB:  PubMed          Journal:  Nat Chem Biol        ISSN: 1552-4450            Impact factor:   15.040


  325 in total

1.  A biosynthetic strategy for re-engineering the Staphylococcus aureus cell wall with non-native small molecules.

Authors:  James W Nelson; Alexander G Chamessian; Patrick J McEnaney; Ryan P Murelli; Barbara I Kazmierczak; Barbara I Kazmiercak; David A Spiegel
Journal:  ACS Chem Biol       Date:  2010-10-05       Impact factor: 5.100

2.  4-aminophenylalanine as a biocompatible nucleophilic catalyst for hydrazone ligations at low temperature and neutral pH.

Authors:  Adam R Blanden; Kamalika Mukherjee; Ozlem Dilek; Maura Loew; Susan L Bane
Journal:  Bioconjug Chem       Date:  2011-10-04       Impact factor: 4.774

3.  Dihydroisoxazole analogs for labeling and visualization of catalytically active transglutaminase 2.

Authors:  Laila Dafik; Chaitan Khosla
Journal:  Chem Biol       Date:  2011-01-28

Review 4.  Targeted polymeric therapeutic nanoparticles: design, development and clinical translation.

Authors:  Nazila Kamaly; Zeyu Xiao; Pedro M Valencia; Aleksandar F Radovic-Moreno; Omid C Farokhzad
Journal:  Chem Soc Rev       Date:  2012-03-05       Impact factor: 54.564

5.  Synthesis of polystyrene microspheres and functionalization with Pd(0) nanoparticles to perform bioorthogonal organometallic chemistry in living cells.

Authors:  Asier Unciti-Broceta; Emma M V Johansson; Rahimi M Yusop; Rosario M Sánchez-Martín; Mark Bradley
Journal:  Nat Protoc       Date:  2012-05-31       Impact factor: 13.491

6.  A BODIPY-cyclooctyne for protein imaging in live cells.

Authors:  Kimberly E Beatty; Janek Szychowski; John D Fisk; David A Tirrell
Journal:  Chembiochem       Date:  2011-08-09       Impact factor: 3.164

7.  Genome-wide kinetics of nucleosome turnover determined by metabolic labeling of histones.

Authors:  Roger B Deal; Jorja G Henikoff; Steven Henikoff
Journal:  Science       Date:  2010-05-28       Impact factor: 47.728

8.  A high-throughput SAMDI-mass spectrometry assay for isocitrate dehydrogenase 1.

Authors:  Sarah E Anderson; Natalie S Fahey; Jungsoo Park; Patrick T O'Kane; Chad A Mirkin; Milan Mrksich
Journal:  Analyst       Date:  2020-04-16       Impact factor: 4.616

9.  Constructing New Bioorthogonal Reagents and Reactions.

Authors:  R David Row; Jennifer A Prescher
Journal:  Acc Chem Res       Date:  2018-05-04       Impact factor: 22.384

10.  Live-cell vibrational imaging of choline metabolites by stimulated Raman scattering coupled with isotope-based metabolic labeling.

Authors:  Fanghao Hu; Lu Wei; Chaogu Zheng; Yihui Shen; Wei Min
Journal:  Analyst       Date:  2014-05-21       Impact factor: 4.616

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