Literature DB >> 16801548

Discovery of aminoacyl-tRNA synthetase activity through cell-surface display of noncanonical amino acids.

A James Link1, Mandy K S Vink1, Nicholas J Agard2,3, Jennifer A Prescher2,3, Carolyn R Bertozzi2,3, David A Tirrell4.   

Abstract

The incorporation of noncanonical amino acids into recombinant proteins in Escherichia coli can be facilitated by the introduction of new aminoacyl-tRNA synthetase activity into the expression host. We describe here a screening procedure for the identification of new aminoacyl-tRNA synthetase activity based on the cell surface display of noncanonical amino acids. Screening of a saturation mutagenesis library of the E. coli methionyl-tRNA synthetase (MetRS) led to the discovery of three MetRS mutants capable of incorporating the long-chain amino acid azidonorleucine into recombinant proteins with modest efficiency. The Leu-13 --> Gly (L13G) mutation is found in each of the three MetRS mutants, and the MetRS variant containing this single mutation is highly efficient in producing recombinant proteins that contain azidonorleucine.

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Year:  2006        PMID: 16801548      PMCID: PMC1502431          DOI: 10.1073/pnas.0601167103

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  31 in total

1.  Biosynthesis of proteins incorporating a versatile set of phenylalanine analogues.

Authors:  Kent Kirshenbaum; Isaac S Carrico; David A Tirrell
Journal:  Chembiochem       Date:  2002-03-01       Impact factor: 3.164

2.  Enlarging the amino acid set of Escherichia coli by infiltration of the valine coding pathway.

Authors:  V Döring; H D Mootz; L A Nangle; T L Hendrickson; V de Crécy-Lagard; P Schimmel; P Marlière
Journal:  Science       Date:  2001-04-20       Impact factor: 47.728

3.  Expanding the genetic code of Escherichia coli.

Authors:  L Wang; A Brock; B Herberich; P G Schultz
Journal:  Science       Date:  2001-04-20       Impact factor: 47.728

4.  Efficient introduction of aryl bromide functionality into proteins in vivo.

Authors:  N Sharma; R Furter; P Kast; D A Tirrell
Journal:  FEBS Lett       Date:  2000-02-04       Impact factor: 4.124

5.  A designed phenylalanyl-tRNA synthetase variant allows efficient in vivo incorporation of aryl ketone functionality into proteins.

Authors:  Deepshikha Datta; Pin Wang; Isaac S Carrico; Stephen L Mayo; David A Tirrell
Journal:  J Am Chem Soc       Date:  2002-05-22       Impact factor: 15.419

6.  The proofreading of hydroxy analogues of leucine and isoleucine by leucyl-tRNA synthetases from E. coli and yeast.

Authors:  S Englisch; U Englisch; F von der Haar; F Cramer
Journal:  Nucleic Acids Res       Date:  1986-10-10       Impact factor: 16.971

7.  Presentation and detection of azide functionality in bacterial cell surface proteins.

Authors:  A James Link; Mandy K S Vink; David A Tirrell
Journal:  J Am Chem Soc       Date:  2004-09-01       Impact factor: 15.419

8.  Bioconjugation by copper(I)-catalyzed azide-alkyne [3 + 2] cycloaddition.

Authors:  Qian Wang; Timothy R Chan; Robert Hilgraf; Valery V Fokin; K Barry Sharpless; M G Finn
Journal:  J Am Chem Soc       Date:  2003-03-19       Impact factor: 15.419

9.  Azidoalanine mutagenicity in Salmonella: effect of homologation and alpha-methyl substitution.

Authors:  J B Mangold; M R Mischke; J M LaVelle
Journal:  Mutat Res       Date:  1989-02       Impact factor: 2.433

10.  A strain-promoted [3 + 2] azide-alkyne cycloaddition for covalent modification of biomolecules in living systems.

Authors:  Nicholas J Agard; Jennifer A Prescher; Carolyn R Bertozzi
Journal:  J Am Chem Soc       Date:  2004-11-24       Impact factor: 15.419

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  57 in total

Review 1.  Residue-specific incorporation of non-canonical amino acids into proteins: recent developments and applications.

Authors:  Jeremiah A Johnson; Ying Y Lu; James A Van Deventer; David A Tirrell
Journal:  Curr Opin Chem Biol       Date:  2010-11-09       Impact factor: 8.822

Review 2.  Proteomics of the Synapse--A Quantitative Approach to Neuronal Plasticity.

Authors:  Daniela C Dieterich; Michael R Kreutz
Journal:  Mol Cell Proteomics       Date:  2015-08-25       Impact factor: 5.911

3.  Metal-free sequential [3 + 2]-dipolar cycloadditions using cyclooctynes and 1,3-dipoles of different reactivity.

Authors:  Brian C Sanders; Frédéric Friscourt; Petr A Ledin; Ngalle Eric Mbua; Selvanathan Arumugam; Jun Guo; Thomas J Boltje; Vladimir V Popik; Geert-Jan Boons
Journal:  J Am Chem Soc       Date:  2010-12-23       Impact factor: 15.419

4.  Highly Constrained Bicyclic Scaffolds for the Discovery of Protease-Stable Peptides via mRNA Display.

Authors:  David E Hacker; Jan Hoinka; Emil S Iqbal; Teresa M Przytycka; Matthew C T Hartman
Journal:  ACS Chem Biol       Date:  2017-02-01       Impact factor: 5.100

5.  Comparative analysis of cleavable azobenzene-based affinity tags for bioorthogonal chemical proteomics.

Authors:  Yu-Ying Yang; Markus Grammel; Anuradha S Raghavan; Guillaume Charron; Howard C Hang
Journal:  Chem Biol       Date:  2010-11-24

6.  A FRET-based fluorogenic phosphine for live-cell imaging with the Staudinger ligation.

Authors:  Matthew J Hangauer; Carolyn R Bertozzi
Journal:  Angew Chem Int Ed Engl       Date:  2008       Impact factor: 15.336

7.  Visualizing metabolically labeled glycoconjugates of living cells by copper-free and fast huisgen cycloadditions.

Authors:  Xinghai Ning; Jun Guo; Margreet A Wolfert; Geert-Jan Boons
Journal:  Angew Chem Int Ed Engl       Date:  2008       Impact factor: 15.336

8.  Noncanonical amino acids in the interrogation of cellular protein synthesis.

Authors:  John T Ngo; David A Tirrell
Journal:  Acc Chem Res       Date:  2011-08-04       Impact factor: 22.384

Review 9.  Exterior design: strategies for redecorating the bacterial surface with small molecules.

Authors:  Samir Gautam; Thomas J Gniadek; Taehan Kim; David A Spiegel
Journal:  Trends Biotechnol       Date:  2013-03-13       Impact factor: 19.536

10.  Switching from an induced-fit to a lock-and-key mechanism in an aminoacyl-tRNA synthetase with modified specificity.

Authors:  Emmanuelle Schmitt; I Caglar Tanrikulu; Tae Hyeon Yoo; Michel Panvert; David A Tirrell; Yves Mechulam
Journal:  J Mol Biol       Date:  2009-10-23       Impact factor: 5.469

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