Literature DB >> 17139335

Functional and quantitative proteomics using SILAC.

Matthias Mann1.   

Abstract

Researchers in many biological areas now routinely characterize proteins by mass spectrometry. Among the many formats for quantitative proteomics, stable-isotope labelling by amino acids in cell culture (SILAC) has emerged as a simple and powerful one. SILAC removes false positives in protein-interaction studies, reveals large-scale kinetics of proteomes and - as a quantitative phosphoproteomics technology - directly uncovers important points in the signalling pathways that control cellular decisions.

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Year:  2006        PMID: 17139335     DOI: 10.1038/nrm2067

Source DB:  PubMed          Journal:  Nat Rev Mol Cell Biol        ISSN: 1471-0072            Impact factor:   94.444


  348 in total

1.  QTIPS: a novel method of unsupervised determination of isotopic amino acid distribution in SILAC experiments.

Authors:  David J Dilworth; Ramsey A Saleem; Richard S Rogers; Hamid Mirzaei; John Boyle; John D Aitchison
Journal:  J Am Soc Mass Spectrom       Date:  2010-04-08       Impact factor: 3.109

2.  Cardioproteomics: advancing the discovery of signaling mechanisms involved in cardiovascular diseases.

Authors:  Ziyou Cui; Shannamar Dewey; Aldrin V Gomes
Journal:  Am J Cardiovasc Dis       Date:  2011-09-10

3.  Mapping the protein interaction network of the human COP9 signalosome complex using a label-free QTAX strategy.

Authors:  Lei Fang; Robyn M Kaake; Vishal R Patel; Yingying Yang; Pierre Baldi; Lan Huang
Journal:  Mol Cell Proteomics       Date:  2012-04-03       Impact factor: 5.911

4.  Absolute quantitation of isoforms of post-translationally modified proteins in transgenic organism.

Authors:  Yaojun Li; Yiwei Shu; Changchao Peng; Lin Zhu; Guangyu Guo; Ning Li
Journal:  Mol Cell Proteomics       Date:  2012-03-22       Impact factor: 5.911

Review 5.  Quantitative phosphoproteomics: New technologies and applications in the DNA damage response.

Authors:  Huilin Zhou; Claudio P Albuquerque; Jason Liang; Raymond T Suhandynata; Stephanie Weng
Journal:  Cell Cycle       Date:  2010-09-26       Impact factor: 4.534

6.  High-stringency tandem affinity purification of proteins conjugated to ubiquitin-like moieties.

Authors:  Filip Golebiowski; Michael H Tatham; Akihiro Nakamura; Ronald T Hay
Journal:  Nat Protoc       Date:  2010-04-15       Impact factor: 13.491

Review 7.  Profiling of protein interaction networks of protein complexes using affinity purification and quantitative mass spectrometry.

Authors:  Robyn M Kaake; Xiaorong Wang; Lan Huang
Journal:  Mol Cell Proteomics       Date:  2010-05-05       Impact factor: 5.911

8.  Quantitative proteomics using stable isotope labeling with amino acids in cell culture reveals changes in the cytoplasmic, nuclear, and nucleolar proteomes in Vero cells infected with the coronavirus infectious bronchitis virus.

Authors:  Edward Emmott; Mark A Rodgers; Andrew Macdonald; Sarah McCrory; Paul Ajuh; Julian A Hiscox
Journal:  Mol Cell Proteomics       Date:  2010-05-13       Impact factor: 5.911

9.  SILAC peptide ratio calculator: a tool for SILAC quantitation of peptides and post-translational modifications.

Authors:  Xiaoyan Guan; Neha Rastogi; Mark R Parthun; Michael A Freitas
Journal:  J Proteome Res       Date:  2014-01-09       Impact factor: 4.466

10.  Cell-surface HSP70 associates with thrombomodulin in endothelial cells.

Authors:  Gabriela Venturini; Ana I S Moretti; Thaís L S Araujo; Leonardo Y Tanaka; Alexandre Costa Pereira; Francisco R M Laurindo
Journal:  Cell Stress Chaperones       Date:  2019-01-15       Impact factor: 3.667

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