Literature DB >> 19606142

The active form of DNA polymerase V is UmuD'(2)C-RecA-ATP.

Qingfei Jiang1, Kiyonobu Karata, Roger Woodgate, Michael M Cox, Myron F Goodman.   

Abstract

DNA-damage-induced SOS mutations arise when Escherichia coli DNA polymerase (pol) V, activated by a RecA nucleoprotein filament (RecA*), catalyses translesion DNA synthesis. Here we address two longstanding enigmatic aspects of SOS mutagenesis, the molecular composition of mutagenically active pol V and the role of RecA*. We show that RecA* transfers a single RecA-ATP stoichiometrically from its DNA 3'-end to free pol V (UmuD'(2)C) to form an active mutasome (pol V Mut) with the composition UmuD'(2)C-RecA-ATP. Pol V Mut catalyses TLS in the absence of RecA* and deactivates rapidly upon dissociation from DNA. Deactivation occurs more slowly in the absence of DNA synthesis, while retaining RecA-ATP in the complex. Reactivation of pol V Mut is triggered by replacement of RecA-ATP from RecA*. Thus, the principal role of RecA* in SOS mutagenesis is to transfer RecA-ATP to pol V, and thus generate active mutasomal complex for translesion synthesis.

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Year:  2009        PMID: 19606142      PMCID: PMC2731490          DOI: 10.1038/nature08178

Source DB:  PubMed          Journal:  Nature        ISSN: 0028-0836            Impact factor:   49.962


  23 in total

1.  The processivity factor beta controls DNA polymerase IV traffic during spontaneous mutagenesis and translesion synthesis in vivo.

Authors:  Nathalie Lenne-Samuel; Jérôme Wagner; Hélène Etienne; Robert P P Fuchs
Journal:  EMBO Rep       Date:  2001-12-19       Impact factor: 8.807

2.  DNA polymerase V and RecA protein, a minimal mutasome.

Authors:  Katharina Schlacher; Kris Leslie; Claire Wyman; Roger Woodgate; Michael M Cox; Myron F Goodman
Journal:  Mol Cell       Date:  2005-02-18       Impact factor: 17.970

3.  RecA acts in trans to allow replication of damaged DNA by DNA polymerase V.

Authors:  Katharina Schlacher; Michael M Cox; Roger Woodgate; Myron F Goodman
Journal:  Nature       Date:  2006-08-24       Impact factor: 49.962

4.  Roles of E. coli DNA polymerases IV and V in lesion-targeted and untargeted SOS mutagenesis.

Authors:  M Tang; P Pham; X Shen; J S Taylor; M O'Donnell; R Woodgate; M F Goodman
Journal:  Nature       Date:  2000-04-27       Impact factor: 49.962

5.  The mutagenesis protein UmuC is a DNA polymerase activated by UmuD', RecA, and SSB and is specialized for translesion replication.

Authors:  N B Reuven; G Arad; A Maor-Shoshani; Z Livneh
Journal:  J Biol Chem       Date:  1999-11-05       Impact factor: 5.157

6.  A model for SOS-lesion-targeted mutations in Escherichia coli.

Authors:  P Pham; J G Bertram; M O'Donnell; R Woodgate; M F Goodman
Journal:  Nature       Date:  2001-01-18       Impact factor: 49.962

Review 7.  Recombinational repair of DNA damage in Escherichia coli and bacteriophage lambda.

Authors:  A Kuzminov
Journal:  Microbiol Mol Biol Rev       Date:  1999-12       Impact factor: 11.056

8.  UmuD'(2)C is an error-prone DNA polymerase, Escherichia coli pol V.

Authors:  M Tang; X Shen; E G Frank; M O'Donnell; R Woodgate; M F Goodman
Journal:  Proc Natl Acad Sci U S A       Date:  1999-08-03       Impact factor: 11.205

9.  Specific RecA amino acid changes affect RecA-UmuD'C interaction.

Authors:  S Sommer; F Boudsocq; R Devoret; A Bailone
Journal:  Mol Microbiol       Date:  1998-04       Impact factor: 3.501

10.  Biochemical basis of SOS-induced mutagenesis in Escherichia coli: reconstitution of in vitro lesion bypass dependent on the UmuD'2C mutagenic complex and RecA protein.

Authors:  M Tang; I Bruck; R Eritja; J Turner; E G Frank; R Woodgate; M O'Donnell; M F Goodman
Journal:  Proc Natl Acad Sci U S A       Date:  1998-08-18       Impact factor: 11.205

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  77 in total

1.  X-ray crystal structure of the bacterial conjugation factor PsiB, a negative regulator of RecA.

Authors:  Vessela Petrova; Kenneth A Satyshur; Nicholas P George; Darrell McCaslin; Michael M Cox; James L Keck
Journal:  J Biol Chem       Date:  2010-07-21       Impact factor: 5.157

Review 2.  A new model for SOS-induced mutagenesis: how RecA protein activates DNA polymerase V.

Authors:  Meghna Patel; Qingfei Jiang; Roger Woodgate; Michael M Cox; Myron F Goodman
Journal:  Crit Rev Biochem Mol Biol       Date:  2010-06       Impact factor: 8.250

3.  Creating directed double-strand breaks with the Ref protein: a novel RecA-dependent nuclease from bacteriophage P1.

Authors:  Marielle C Gruenig; Duo Lu; Sang Joon Won; Charles L Dulberger; Angela J Manlick; James L Keck; Michael M Cox
Journal:  J Biol Chem       Date:  2010-12-30       Impact factor: 5.157

Review 4.  Translesion DNA synthesis and mutagenesis in prokaryotes.

Authors:  Robert P Fuchs; Shingo Fujii
Journal:  Cold Spring Harb Perspect Biol       Date:  2013-12-01       Impact factor: 10.005

5.  DNA polymerase V kinetics support the instructive nature of an oxidized abasic lesion in Escherichia coli.

Authors:  John Ernest V Bajacan; Marc M Greenberg
Journal:  Biochemistry       Date:  2013-09-09       Impact factor: 3.162

6.  A ΔdinB mutation that sensitizes Escherichia coli to the lethal effects of UV- and X-radiation.

Authors:  Mei-Chong W Lee; Magdalena Franco; Doris M Vargas; Deborah A Hudman; Steven J White; Robert G Fowler; Neil J Sargentini
Journal:  Mutat Res       Date:  2014-03-20       Impact factor: 2.433

7.  Escherichia coli nucleoside diphosphate kinase mutants depend on translesion DNA synthesis to prevent mutagenesis.

Authors:  Jared Nordman; Andrew Wright
Journal:  J Bacteriol       Date:  2011-07-01       Impact factor: 3.490

8.  The recombination mediator proteins RecFOR maintain RecA* levels for maximal DNA polymerase V Mut activity.

Authors:  Paromita Raychaudhury; Kenneth J Marians
Journal:  J Biol Chem       Date:  2018-11-27       Impact factor: 5.157

9.  Role of RNase H enzymes in maintaining genome stability in Escherichia coli expressing a steric-gate mutant of pol VICE391.

Authors:  Erin Walsh; Sarah S Henrikus; Alexandra Vaisman; Karolina Makiela-Dzbenska; Thomas J Armstrong; Krystian Łazowski; John P McDonald; Myron F Goodman; Antoine M van Oijen; Piotr Jonczyk; Iwona J Fijalkowska; Andrew Robinson; Roger Woodgate
Journal:  DNA Repair (Amst)       Date:  2019-08-10

10.  Co-orientation of replication and transcription preserves genome integrity.

Authors:  Anjana Srivatsan; Ashley Tehranchi; David M MacAlpine; Jue D Wang
Journal:  PLoS Genet       Date:  2010-01-15       Impact factor: 5.917

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