Literature DB >> 20441441

A new model for SOS-induced mutagenesis: how RecA protein activates DNA polymerase V.

Meghna Patel1, Qingfei Jiang, Roger Woodgate, Michael M Cox, Myron F Goodman.   

Abstract

In Escherichia coli, cell survival and genomic stability after UV radiation depends on repair mechanisms induced as part of the SOS response to DNA damage. The early phase of the SOS response is mostly dominated by accurate DNA repair, while the later phase is characterized with elevated mutation levels caused by error-prone DNA replication. SOS mutagenesis is largely the result of the action of DNA polymerase V (pol V), which has the ability to insert nucleotides opposite various DNA lesions in a process termed translesion DNA synthesis (TLS). Pol V is a low-fidelity polymerase that is composed of UmuD'(2)C and is encoded by the umuDC operon. Pol V is strictly regulated in the cell so as to avoid genomic mutation overload. RecA nucleoprotein filaments (RecA*), formed by RecA binding to single-stranded DNA with ATP, are essential for pol V-catalyzed TLS both in vivo and in vitro. This review focuses on recent studies addressing the protein composition of active DNA polymerase V, and the role of RecA protein in activating this enzyme. Based on unforeseen properties of RecA*, we describe a new model for pol V-catalyzed SOS-induced mutagenesis.

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Year:  2010        PMID: 20441441      PMCID: PMC2874081          DOI: 10.3109/10409238.2010.480968

Source DB:  PubMed          Journal:  Crit Rev Biochem Mol Biol        ISSN: 1040-9238            Impact factor:   8.250


  85 in total

1.  Uvm mutants of Escherichia coli K12 deficient in UV mutagenesis. II. Further evidence for a novel function in error-prone repair.

Authors:  G Steinborn
Journal:  Mol Gen Genet       Date:  1979-09

2.  Direct observation of individual RecA filaments assembling on single DNA molecules.

Authors:  Roberto Galletto; Ichiro Amitani; Ronald J Baskin; Stephen C Kowalczykowski
Journal:  Nature       Date:  2006-09-20       Impact factor: 49.962

3.  Understanding how the replisome works.

Authors:  Kenneth J Marians
Journal:  Nat Struct Mol Biol       Date:  2008-02       Impact factor: 15.369

4.  A model for SOS-lesion-targeted mutations in Escherichia coli.

Authors:  P Pham; J G Bertram; M O'Donnell; R Woodgate; M F Goodman
Journal:  Nature       Date:  2001-01-18       Impact factor: 49.962

Review 5.  Structure and function of RecA-DNA complexes.

Authors:  A Stasiak; E H Egelman
Journal:  Experientia       Date:  1994-03-15

Review 6.  Homologous genetic recombination: the pieces begin to fall into place.

Authors:  A J Clark; S J Sandler
Journal:  Crit Rev Microbiol       Date:  1994       Impact factor: 7.624

Review 7.  Ultraviolet mutagenesis and inducible DNA repair in Escherichia coli.

Authors:  E M Witkin
Journal:  Bacteriol Rev       Date:  1976-12

8.  UmuD'(2)C is an error-prone DNA polymerase, Escherichia coli pol V.

Authors:  M Tang; X Shen; E G Frank; M O'Donnell; R Woodgate; M F Goodman
Journal:  Proc Natl Acad Sci U S A       Date:  1999-08-03       Impact factor: 11.205

9.  The Saccharomyces cerevisiae RAD30 gene, a homologue of Escherichia coli dinB and umuC, is DNA damage inducible and functions in a novel error-free postreplication repair mechanism.

Authors:  J P McDonald; A S Levine; R Woodgate
Journal:  Genetics       Date:  1997-12       Impact factor: 4.562

10.  Cleavage of the Escherichia coli lexA protein by the recA protease.

Authors:  J W Little; S H Edmiston; L Z Pacelli; D W Mount
Journal:  Proc Natl Acad Sci U S A       Date:  1980-06       Impact factor: 11.205

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  55 in total

1.  Grand challenge commentary: The chemistry of a dynamic genome.

Authors:  Rahul M Kohli
Journal:  Nat Chem Biol       Date:  2010-12       Impact factor: 15.040

2.  The SMC-like protein complex SbcCD enhances DNA polymerase IV-dependent spontaneous mutation in Escherichia coli.

Authors:  Kimberly A M Storvik; Patricia L Foster
Journal:  J Bacteriol       Date:  2010-12-03       Impact factor: 3.490

3.  Creating directed double-strand breaks with the Ref protein: a novel RecA-dependent nuclease from bacteriophage P1.

Authors:  Marielle C Gruenig; Duo Lu; Sang Joon Won; Charles L Dulberger; Angela J Manlick; James L Keck; Michael M Cox
Journal:  J Biol Chem       Date:  2010-12-30       Impact factor: 5.157

4.  Presynaptic filament dynamics in homologous recombination and DNA repair.

Authors:  Jie Liu; Kirk T Ehmsen; Wolf-Dietrich Heyer; Scott W Morrical
Journal:  Crit Rev Biochem Mol Biol       Date:  2011-06       Impact factor: 8.250

Review 5.  Culture history and population heterogeneity as determinants of bacterial adaptation: the adaptomics of a single environmental transition.

Authors:  Ben Ryall; Gustavo Eydallin; Thomas Ferenci
Journal:  Microbiol Mol Biol Rev       Date:  2012-09       Impact factor: 11.056

6.  The discovery of error-prone DNA polymerase V and its unique regulation by RecA and ATP.

Authors:  Myron F Goodman
Journal:  J Biol Chem       Date:  2014-08-26       Impact factor: 5.157

7.  Simple and efficient purification of Escherichia coli DNA polymerase V: cofactor requirements for optimal activity and processivity in vitro.

Authors:  Kiyonobu Karata; Alexandra Vaisman; Myron F Goodman; Roger Woodgate
Journal:  DNA Repair (Amst)       Date:  2012-02-15

8.  The recombination mediator proteins RecFOR maintain RecA* levels for maximal DNA polymerase V Mut activity.

Authors:  Paromita Raychaudhury; Kenneth J Marians
Journal:  J Biol Chem       Date:  2018-11-27       Impact factor: 5.157

9.  Architecture of y-family DNA polymerases relevant to translesion DNA synthesis as revealed in structural and molecular modeling studies.

Authors:  Sushil Chandani; Christopher Jacobs; Edward L Loechler
Journal:  J Nucleic Acids       Date:  2010-09-16

Review 10.  New insights into replisome fluidity during chromosome replication.

Authors:  Isabel Kurth; Mike O'Donnell
Journal:  Trends Biochem Sci       Date:  2012-11-12       Impact factor: 13.807

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